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Ecosystem Engineering: Sediment entrainment and flocculation mediated by microbial produced extracellular polymeric substances (EPS)

Sediment erosion and transport is critical to the ecological and commercial health of aquatic habitats from watershed to sea. There is now a consensus that microorganisms inhabiting the system mediate the erosive response of natural sediments ('ecosystem engineers') along with physicochemical properties. The biological mechanism is through secretion of a microbial organic glue (EPS: extracellular polymeric substances) that enhances binding forces between sediment grains to impact sediment stability and post-entrainment flocculation. The proposed work will elucidate the functional capability of heterotrophic bacteria, cyanobacteria and eukaryotic microalgae for mediating freshwater sediments to influence sediment erosion and transport. The potential and relevance of natural biofilms to provide this important 'ecosystem service' will be investigated for different niches in a freshwater habitat. Thereby, variations of the EPS 'quality' and 'quantity' to influence cohesion within sediments and flocs will be related to shifts in biofilm composition, sediment characteristics (e.g. organic background) and varying abiotic conditions (e.g. light, hydrodynamic regime) in the water body. Thus, the proposed interdisciplinary work will contribute to a conceptual understanding of microbial sediment engineering that represents an important ecosystem function in freshwater habitats. The research has wide implications for the water framework directive and sediment management strategies.

Forschergruppe (FOR) 1806: The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM), Forschergruppe (FOR) 1806: The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM)

We are currently facing the urgent need to improve our understanding of carbon cycling in subsoils, because the organic carbon pool below 30 cm depth is considerably larger than that in the topsoil and a substantial part of the subsoil C pool appears to be much less recalcitrant than expected over the last decades. Therefore, small changes in environmental conditions could change not only carbon cycling in topsoils, but also in subsoils. While organic matter stabilization mechanisms and factors controlling its turnover are well understood in topsoils, the underlying mechanisms are not valid in subsoils due to depth dependent differences regarding (1) amounts and composition of C-pools and C-inputs, (2) aeration, moisture and temperature regimes, (3) relevance of specific soil organic carbon (SOC) stabilisation mechanisms and (4) spatial heterogeneity of physico-chemical and biological parameters. Due to very low C concentrations and high spatio-temporal variability of properties and processes, the investigation of subsoil phenomena and processes poses major methodological, instrumental and analytical challenges. This project will face these challenges with a transdisciplinary team of soil scientists applying innovative approaches and considering the magnitude, chemical and isotopic composition and 14C-content of all relevant C-flux components and C-fractions. Taking also the spatial and temporal variability into account, will allow us to understand the four-dimensional changes of C-cycling in this environment. The nine closely interlinked subprojects coordinated by the central project will combine field C-flux measurements with detailed analyses of subsoil properties and in-situ experiments at a central field site on a sandy soil near Hannover. The field measurements are supplemented by laboratory studies for the determination of factors controlling C stabilization and C turnover. Ultimately, the results generated by the subprojects and the data synthesized in the coordinating project will greatly enhance our knowledge and conceptual understanding of the processes and controlling factors of subsoil carbon turnover as a prerequisite for numerical modelling of C-dynamics in subsoils.

Forest management in the Earth system

The majority of the worlds forests has undergone some form of management, such as clear-cut or thinning. This management has direct relevance for global climate: Studies estimate that forest management emissions add a third to those from deforestation, while enhanced productivity in managed forests increases the capacity of the terrestrial biosphere to act as a sink for carbon dioxide emissions. However, uncertainties in the assessment of these fluxes are large. Moreover, forests influence climate also by altering the energy and water balance of the land surface. In many regions of historical deforestation, such biogeophysical effects have substantially counteracted warming due to carbon dioxide emissions. However, the effect of management on biogeophysical effects is largely unknown beyond local case studies. While the effects of climate on forest productivity is well established in forestry models, the effects of forest management on climate is less understood. Closing this feedback cycle is crucial to understand the driving forces behind past climate changes to be able to predict future climate responses and thus the required effort to adapt to it or avert it. To investigate the role of forest management in the climate system I propose to integrate a forest management module into a comprehensive Earth system model. The resulting model will be able to simultaneously address both directions of the interactions between climate and the managed land surface. My proposed work includes model development and implementation for key forest management processes, determining the growth and stock of living biomass, soil carbon cycle, and biophysical land surface properties. With this unique tool I will be able to improve estimates of terrestrial carbon source and sink terms and to assess the susceptibility of past and future climate to combined carbon cycle and biophysical effects of forest management. Furthermore, representing feedbacks between forest management and climate in a global climate model could advance efforts to combat climate change. Changes in forest management are inevitable to adapt to future climate change. In this process, is it possible to identify win-win strategies for which local management changes do not only help adaptation, but at the same time mitigate global warming by presenting favorable effects on climate? The proposed work opens a range of long-term research paths, with the aim of strengthening the climate perspective in the economic considerations of forest management and helping to improve local decisionmaking with respect to adaptation and mitigation.

Sonderforschungsbereich (SFB) 1357: MIKROPLASTIK - Gesetzmäßigkeiten der Bildung, des Transports, des physikalisch-chemischen Verhaltens sowie der biologischen Effekte: Von Modell- zu komplexen Systemen als Grundlage neuer Lösungsansätze; MICROPLASTICS - Understanding the mechanisms and processes of biological effects, transport and formation: From model to complex systems as a basis for new solut, Teilprojekt C 05: Abbau und Verhalten von Kunststoffen und deren Mikroplastik-Partikeln in technischen Systemen der Wasser- und Abfallwirtschaft

Teilprojekt C05 hat zum Ziel, den wichtigen Eintragsweg für Kunststoffe, in Form von Mikroplastik, in die Umwelt aus technischen Anlagen (MP) mechanistisch aufzuklären. Gleichzeitig sollen neue Ansätze verfolgt werden, die zur Vermeidung bzw. Reduktion von MP aus Standardkunststoffen maßgeblich beitragen sollen. Zu diesem Zweck sollen Polyethylen, Polypropylen, Polystyrol, Nylon, Polyethylenterephthalat, Polyisopren und Polyvinylchlorid durch Beschleuniger (in situ) in ihren Oberflächeneigenschaften für die Biofilmbildung modifiziert und dadurch unter Prozessbedingungen biologisch angreifbar und abbaubar gemacht werden. So können auch Standardkunststoffe umweltverträglicher bezüglich der MP-Partikel Bildung werden. Damit geht TP C05 weit über die bislang üblichen eher deskriptiven Studien zu MP in technischen Anlagen und der Umwelt hinaus. Folgende zentrale Fragen sollen in TP C05 in Hinblick MP-Partikel in technischen Anlagen der Abfall- und Abwasserwirtschaft beantwortet werden: 1. Kommt es in den Anlagen zu spezifischen (biologischen) Abbau- und Degradationsvorgängen? 2. Wie hängen die zu beobachtenden Prozesse von MP-Charakteristika (Materialsorte, Zusammensetzung, Größe, Morphologie, Beschichtung) ab, ? 3. Lassen sich die Vorgänge ('Bioabbaubarkeit') durch gezielte Modifikation der Partikeloberfläche vor oder in den Anlagen beschleunigen? 4. Welche ökologischen Konsequenzen einer Ausbringung der (modifizierten) Partikel in die Umwelt und hier vor allem in den Boden lassen sich postulieren?

Micro-scaled hydraulic heterogeneity in subsoils

Nutrient and water supply for organisms in soil is strongly affected by the physical and physico-chemical properties of the microenvironment, i.e. pore space topology (pore size, tortuosity, connectivity) and pore surface properties (surface charge, surface energy). Spatial decoupling of biological processes through the physical (spatial) separation of SOM, microorganisms and extracellular enzyme activity is apparently one of the most important factors leading to the protection and stabilization of soil organic matter (SOM) in subsoils. However, it is largely unknown, if physical constraints can explain the very low turnover rates of organic carbon in subsoils. Hence, the objective of P4 is to combine the information from the physical structure of the soil (local bulk density, macropore structure, aggregation, texture gradients) with surface properties of particles or aggregate surfaces to obtain a comprehensive set of physical important parameters. It is the goal to determine how relevant these physical factors in the subsoil are to enforce the hydraulic heterogeneity of the subsoil flow system during wetting and drying. Our hypothesis is that increasing water repellency enforces the moisture pattern heterogeneity caused already by geometrical factors. Pore space heterogeneity will be assessed by the bulk density patterns via x-ray radiography. Local pattern of soil moisture is evaluated by the difference of X-ray signals of dry and wet soil (project partner H.J. Vogel, UFZ Halle). With the innovative combination of three methods (high resolution X-ray radiography, small scale contact angle mapping, both applied to a flow cell shaped sample with undisturbed soil) it will be determined if the impact of water repellency leads to an increase in the hydraulic flow field heterogeneity of the unsaturated sample, i.e. during infiltration events and the following redistribution phase. An interdisciplinary cooperation within the research program is the important link which is realized by using the same flow cell samples to match the spatial patterns of physical, chemical, and biological factors in undisturbed subsoil. This cooperation with respect to spatial pattern analysis will include the analysis of enzyme activities within and outside of flow paths and the spatial distribution of key soil properties (texture, organic carbon, iron oxide content) evaluated by IR mapping. To study dissolved organic matter (DOM) sorption in soils of varying mineral composition and the selective association of DOM with mineral surfaces in context with recognized flow field pattern, we will conduct a central DOM leaching experiment and the coating of iron oxides which are placed inside the flow cell during percolation with marked DOM solution. Overall objective is to elucidate if spatial separation of degrading organisms and enzymes from the substrates may be interconnected with defined physical features of the soil matrix thus explaining subsoil SOM stability and -dynami

Coordination and administration of the priority programme SPP 1315 Biogeochemical Interfaces in Soil, Biotic and abiotic factors that dive the function of microbial communities at biogeochemical interfaces in different soils (BAMISO)

Biogeochemical interfaces shape microbial community function in soil. On the other hand microbial communities influence the properties of biogeochemical interfaces. Despite the importance of this interplay, basic understanding of the role of biogeochemical interfaces for microbial performance is still missing. We postulate that biogeochemical interfaces in soil are important for the formation of functional consortia of microorganisms, which are able to shape their own microenvironment and therefore influence the properties of interfaces in soil. Furthermore biogeochemical interfaces act as genetic memory of soils, as they can store DNA from dead microbes and protect it from degradation. We propose that for the formation of functional biogeochemical interfaces microbial dispersal (e.g. along fungal networks) in response to quality and quantity of bioavailable carbon and/or water availability plays a major role, as the development of functional guilds of microbes requires energy and depends on the redox state of the habitat.To address these questions, hexadecane degradation will be studied in differently developed artificial and natural soils. To answer the question on the role of carbon quantity and quality, experiments will be performed with and without litter material at different water contents of the soil. Experiments will be performed with intact soil columns as well as soil samples where the developed interface structure has been artificially destroyed. Molecular analysis of hexadecane degrading microbial communties will be done in vitro as well as in situ. The corresponding toolbox has been successfully developed in the first phase of the priority program including methods for genome, transcriptome and proteome analysis.

Dissolved organic matter driven changes in minerals and organic-mineral interactions during paddy soil development

Previous studies indicated that the development and biogeochemistry of paddy soils relates to the parent material, thus the original soil paddies derive from. The proposed research focuses on redox-mediated changes in mineral composition and mineral-associated organic matter (OM) during paddy transformation of different soils. We plan to subject soil samples to a series of redox cycles, in order to mimic paddy soil formation and development. Soils with strongly different properties and mineral composition as well as at different states of paddy transformation; ranging from unchanged soils to fully developed paddy soils, are to be included. We hypothesize that dissolved organic matter is one key driver in redox-mediated transformations, serving as an electron donator as well as interacting with dissolved metals and minerals. The extent of effects shall depend on the parent soil's original mineral assemblage and organic matter and their mutual interactions. The experimental paddy soil transformation will tracked by analyses of soil solutions, of the (re-)distribution of carbon (by addition of 13C-labelled rice straw), of indicative biomolecules (sugars, amino sugars, fatty acids, lignin) and of minerals (including the redox state of Fe). For analyses of organic matter as well as of mineral characteristics we plan to utilize EXAFS and XPS, for Fe-bearing minerals also Mößbauer spectroscopy. This approach of experimental pedology seems appropriate to give insight into the major factors during paddy soil formation and development.

Transport of EINP through soil affected by the dynamics of infiltration flux and particle properties

In this project we experimentally explore the transport of engineered inorganic nanoparticles (EINP) through soils. This is done for original EINPs and some pre-aged form. Transport of NPs in soil is expected to be different from that of reactive solutes, in that hydrodynamic drag, inertial and shear forces as well as the affinity to water-gas interfaces are expected to be more relevant. Hence, the mobility of EINPs in soil is highly sensitive to the morphology of the porous structure and the dynamics of water saturation.This project provides the pore network structure for natural soils using X-ray micro-tomography to allow for an up-scaling of pore-scale interactions explored by project partners to the scale of soil horizons. The pore structure is represented by a network model suitable for pore scale simulations including the dynamics of water-gas interfaces.Pore network simulations will be compared to column experiments for conservative tracers as well as for unaltered and pre-aged EINPs (obtained from INTERFACE). This includes steady state flow scenarios for saturated (ponding) and unsaturated conditions as well as for transient flow to explore the impact of moving water-gas interfaces. The final goal is to arrive at a consistent interpretation of experimental findings and numerical simulations to develop a module for modelling EINP transfer through soil as a function of particle properties, soil structural characteristics and external forcing in terms of flux boundary conditions.

Schwerpunktprogramm (SPP) 1488: Planetary Magnetism (PlanetMag), Structure and electronic transport properties of metallic liquids at conditions of planetary cores

Electrical conductivity is a key parameter in models of magnetic field generation in planetary interiors through magneto-hydrodynamic convection. Measurements of this key material parameter of liquid metals is not possible to date by experiments at relevant conditions, and dynamo models rely on extrapolations from low pressure/temperature experiments, or more recently on ab-initio calculations combining molecular dynamics and linear response calculations, using the Kubo-Greenwood formulation of transport coefficients. Such calculations have been performed for Fe, Fe-alloys, H, He and H-He mixtures to cover the interior of terrestrial and giant gas planets. These simulations are computationally expensive, and an efficient accurate scheme to determine electrical conductivities is desirable. Here we propose a model that can, at much lower computational costs, provide this information. It is based on Ziman theory of electrical conductivity that uses information on the liquid structure, combined with an internally consistent model of potentials for the electron-electron, electron-atom, and atom-atom interactions. In the proposal we formulate the theory and expand it to multi-component systems. We point out that fitting the liquid structure factor is the critical component in the process, and devise strategies on how this can be done efficiently. Fitting the structure factor in a thermodynamically consistent way and having a transferable electron-atom potential we can then relatively cheaply predict the electrical conductivity for a wide range of conditions. Only limited molecular dynamics simulations to obtain the structure factors are required.In the proposed project we will test and advance this model for liquid aluminum, a free-electron like metal, that we have studied with the Kubo-Greenwood method previously. We will then be able to predict the conductivities of Fe, Fe-light elements and H, He, as well as the H-He system that are relevant to the planetary interiors of terrestrial and giant gas planets, respectively.

Schwerpunktprogramm (SPP) 1488: Planetary Magnetism (PlanetMag), Ground-truthing magnetic recording in meteorites

Whether primordial bodies in the solar system possessed internally-generated dynamos is a fundamental constraint to understand the dynamics and timing of early planetary formation. Paleointensity studies on several meteorites reveal that their host planets possessed magnetic fields within an order-of magnitude of the present Earths field. Interpretation of paleointensity data relies heavily on fundamental knowledge of the magnetic properties of the magnetic carriers, such as the single to multidomain size threshold or how the saturation magnetization varies as a function of grain size, yet very little knowledge exists about these key parameters for some of the main magnetic recorders in meteorites: the iron-nickel alloys. Moreover, most meteorites have experienced some amount of shock during their histories, yet the consequence of even very small stresses on paleointensity data is poorly known.We wish to fill these gaps by magnetically characterizing Fe-Ni alloys as a function of grain size and by determining how absolute and relative paleointensity data are biased by strain levels lower than those petrologically observable (less than 4-5 GPa). For example, our preliminary work shows that an imposed stress of 0.6 GPa will reduce absolute paleointensity estimates by 46Prozent for single domain magnetite-bearing rocks. In general, paleointensity determinations possess inherent disadvantages regarding measurement precision and the inordinate amount of human time investment. We intend to overcome these limitations by extending and improving our fully automated magnetic workstation known as the SushiBar.

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