Barley (Hordeum vulgare) is an important cereal grain which serves as major animal fodder crop as well as basis for malt beverages or staple food. Currently barley is ranked fourth in terms of quantity of cereal crops produced worldwide. In times of a constantly growing world population in conjunction with an unforeseeable climate change and groundwater depletion, the accumulation of knowledge concerning cereal growth and rate of yield gain is important. The Nordic Genetic Resource Center holds a major collection of barley mutants produced by irradiation or chemical treatment. One phenotypic group of barley varieties are dwarf mutants (erectoides, brachytic, semidwarf, uzu). They are characterized by a compact spike and high rate of yield while the straw is short and stiff, enhancing the lodging resistance of the plant. Obviously they are of applied interest, but they are also of scientific interest as virtually nothing is known about the genes behind the development of plant dwarfism. The aim of this project is to identify and isolate the genes carrying the mutations by using state of the art techniques for gene cloning at the Carlsberg Laboratory. The identified genes will be connected with the mutant phenotype to reveal the gene function in general. One or two genes will be overexpressed and the resulting recombinant proteins will be biochemically and structurally characterized. The insights how the mutation effects the protein will display the protein function in particular. Identified genes and their mutant alleles will be tested in the barley breeding program of the Carlsberg brewery.
Existing models of soil organic matter (SOM) formation consider plant material as the main source of SOM. Recent results from nuclear magnetic resonance analyses of SOM and from own incubation studies, however, show that microbial residues also contribute to a large extent to SOM formation. Scanning electron microscopy showed that the soil mineral sur-faces are covered by numerous small patchy fragments (100 - 500 nm) deriving from microbial cell wall residues. We will study the formation and fate of these patchy fragments as continuously produced interfaces in artificial soil systems (quartz, montmorillonite, iron oxides, bacteria and carbon sources). We will quantify the relative contributions of different types of soil organisms to patchy fragment formation and elucidate the effect of redox con-ditions and iron mineralogy on the formation and turnover of patchy fragments. The develop-ment of patchy fragments during pedogenesis will be followed by studying soil samples from a chronosequence in the forefield of the retreating Damma glacier. We will characterize chemical and physical properties of the patchy fragments by nanothermal analysis and microscale condensation experiments in an environmental scanning electron microscope. The results will help understanding the processes at and characteristics of biogeochemical interfaces.
Arsenic-contaminated ground- and drinking water is a global environmental problem with about 1-2Prozent of the world's population being affected. The upper drinking water limit for arsenic (10 Micro g/l) recommended by the WHO is often exceeded, even in industrial nations in Europe and the USA. Chronic intake of arsenic causes severe health problems like skin diseases (e.g. blackfoot disease) and cancer. In addition to drinking water, seafood and rice are the main reservoirs for arsenic uptake. Arsenic is oftentimes of geogenic origin and in the environment it is mainly bound to iron(III) minerals. Iron(III)-reducing bacteria are able to dissolve these iron minerals and therefore release the arsenic to the environment. In turn, iron(II)-oxidizing bacteria have the potential to co-precipitate or sorb arsenic during iron(II)- oxidation at neutral pH followed by iron(III) mineral precipitation. This process may reduce arsenic concentrations in the environment drastically, lowering the potential risk for humans dramatically.The main goal of this study therefore is to quantify, identify and isolate anaerobic and aerobic Fe(II)-oxidizing microorganisms in arsenic-containing paddy soil. The co-precipitation and thus removal of arsenic by iron mineral producing bacteria will be determined in batch and microcosm experiments. Finally the influence of rhizosphere redox status on microbial Fe oxidation and arsenic uptake into rice plants will be evaluated in microcosm experiments. The long-term goal of this research is to better understand arsenic-co-precipitation and thus arsenic-immobilization by iron(II)-oxidizing bacteria in rice paddy soil. Potentially these results can lead to an improvement of living conditions in affected countries, e.g. in China or Bangladesh.
Background: Ghanas transition forests, neighbouring savannahs and timber plantations in the Ashanti region face a constant degradation due to the increased occurrence of fires. In most cases the fires are deliberately set by rural people for hunting purposes. Main target is a cane rat, here called grasscutter (Thryonomys swinderianus), whose bushmeat is highly esteemed throughout the country. The animal is a wild herbivorous rodent of subhumid areas in Africa south of the Sahara. The grasscutter meat is an important source of animal protein. Existing high-value timber plantations (mainly Teak, Tectona grandis) are affected by fires for hunting purposes. Thus resulting in growth reduction, loss of biomass or even complete destruction of the forest stands. It became obvious that solutions had to be sought for the reduction of the fire risk. Objectives: Since 2004 the Institute for World Forestry of the Federal Research Centre for Forestry and Forest Products, Hamburg, Germany is cooperating with a Ghanaian timber plantation company (DuPaul Wood Treatment Ltd.) the German Foundation for Forest Conservation in Africa (Stiftung Walderhaltung in Afrika) and the Center for International Migration with the purpose to improve the livelihood of the rural population in the surroundings of the forest plantation sites and simultaneously to safeguard and improve the timber plantations. The introduction of grasscutter rearing systems to local farmers accompanied by permanent agricultural and agroforestry practices appeared to be a promising approach for the prevention of fires in the susceptible areas. Additionally a functioning grasscutter breeding system could contribute to the improvement of food security, development of income sources and the alleviation of poverty. The following measures are implemented: - Identification of farmers interested in grasscutter captive breeding, - Implementation of training courses for farmers on grasscutter rearing, - Delivery of breeding animals, - Supervision of rearing conditions by project staff, - Development of a local extension service for monitoring activities, - Evaluation of structures for grasscutter meat marketing. Results: After identification of key persons for animal rearing training courses were successfully passed and animals were delivered subsequently. Further investigations will evaluate the effects of the grasscutter rearing in the project region. This will be assessed through the - Acceptance of grasscutter rearing by farmers, - Success of the animal caging, - Reproduction rate, - Meat quality, - Marketing success of meat, - Reduction of fire in the vicinity of the timber plantations, - Improvement of peoples livelihood.
Salinity reduces the productivity of cucumber (Cucumis sativus L.) through osmotic and ionic effects. For given atmospheric conditions we hypothesize the existence of an optimal canopy structure at which water use efficiency is maximal and salt accumulation per unit of dry matter production is minimal. This canopy structure optimum can be predicted by integrating physiological processes over the canopy using a functional-structural plant model (FSPM). This model needs to represent the influence of osmotic stress on plant morphology and stomatal conductance, the accumulation of toxic ions and their dynamics in the different compartments of the system, and their toxic effects in the leaf. Experiments will be conducted to parameterize an extended cucumber FSPM. In in-silico experiments with the FSPM we attempt to identify which canopy structure could lead to maximum long-term water use efficiency with minimum ionic stress. The results from in-silico experiments will be evaluated by comparing different canopy structures in greenhouses. Finally, the FSPM will be used to investigate to which extent the improvement of individual mechanisms of salt tolerance like reduced sensitivity of stomatal conductance or leaf expansion can contribute to whole-plant salt tolerance.
Organic matter (OM) composition and dynamic in subsoils is thought to be significantly different from those in surface soils. This has been suggested by increasing apparent 14C ages of bulk soil OM with depth suggesting that the amount of fresh, more easily degradable components is declining. Compositional changes have been inferred from declining ä13C values and C/N ratios indicative for stronger OM transformation. Beside these bulk OM data more specific results on OM composition and preservation mechanisms are very limited but modelling studies and results from incubation experiments suggest the presence and mineralization of younger, 'reactive carbon pool in subsoils. Less refractory OM components may be protected against degradation by interaction with soil mineral particles and within aggregates as suggested by the very limited number of more specific OM analysis e.g., identification of organic compound in soil fractions. The objective of this project is to characterize the composition, transformation, stabilization and bioavailability of OM in subsurface horizons on the molecular level: 1) major sources and compositional changes with depth will be identified by analysis of different lipid compound classes in surface and subsoil horizons, 2) the origin and stabilization of 'reactive OM will be revealed by lipid distributions and 14C values of soil fractions and of selected plant-specific lipids, and 3) organic substrates metabolized by microbial communities in subsoils are identified by distributional and 14C analysis of microbial membrane lipids. Besides detailed analyses of three soil profiles at the subsoil observatory site (Grinderwald), information on regional variability will be gained from analyses of soil profiles at sites with different parent material.
Chromium (Cr) is introduced into the environment by several anthropogenic activities. A striking ex-ample is the area around Kanpur in the Indian state of Uttar Pradesh, where large amounts of Cr-containing wastes have been recently illegally deposited. Hexavalent Cr, a highly toxic and mobile contaminant, is present in significant amounts in these wastes, severely affecting the quality of sur-roundings soils, sediments, and ground waters. The first major goal of this study is to clarify the solid phase speciation of Cr in these wastes and to examine its leaching behavior. X-ray diffraction and synchrotron-based X-ray absorption spectroscopy techniques will be employed for quantitative solid phase speciation of Cr. Its leaching behavior will be studied in column experiments performed at un-saturated moisture conditions with flow interruptions simulating monsoon rain events. Combined with geochemical modeling, the results will allow the evaluation of the leaching potential and release kinetics of Cr from the waste materials. The second major goal is to investigate the spatial distribution, speciation, and solubility of Cr in the rooting zone of chromate-contaminated soils surrounding the landfills, and to study the suitability of biochar as novel soil amendment for mitigating the deleterious effects of chromate pollution. Detailed field samplings and laboratory soil incubation studies will be carried out with two agricultural soils and biochar from the Kanpur region.
Prehistoric pits are filled with ancient topsoil material, which has been preserved there over millennia. A characteristic of these pit fillings is that their colour is different depending on the time the soil material was relocated. Soil colour is the result of soil forming processes and soil properties, and it could therefore indicate the soil characteristics present during that specific period. To the best of our knowledge, no investigation analysed and explained the reasons for these soil colour changes over time. The proposed project will investigate soil parameters from pit fillings of different archaeological periods in the loess area of the Lower Rhine Basin (NW-Germany). It aims to implement the measurement of colour spectra as a novel analytical tool for the rapid analyses of a high number of soil samples: the main goal is to relate highresolution colour data measured by a spectrophotometer to soil parameters that were analysed by conventional pedogenic methods and by mid infrared spectroscopy (MIRS), with a main focus on charred organic matter (BPCAs). This tool would enable us to quantify the variation of soil properties over a timescale of several millennia, during different prehistoric periods at regional scale and for loess soils in general. Detailed information concerning changing soil properties on a regional scale is necessary to determine past soil quality and it helps to increase our understanding of prehistoric soil cultivation practices. Furthermore, these information could also help to increase our understanding about agricultural systems in different archaeological periods.
The relevance of biogeochemical gradients for turnover of organic matter and contaminants is yet poorly understood. This study aims at the identification and quantification of the interaction of different redox processes along gradients. The interaction of iron-, and sulfate reduction and methanogenesis will be studied in controlled batch and column experiments. Factors constraining the accessibility and the energy yield from the use of these electron acceptors will be evaluated, such as passivation of iron oxides, re-oxidation of hydrogen sulfide on iron oxides. The impact of these constraints on the competitiveness of the particular process will then be described. Special focus will be put on the evolution of methanogenic conditions in systems formerly characterized by iron and sulfate reducing condition. As methanogenic conditions mostly evolve from micro-niches, methods to study the existence, evolution and stability of such micro-niches will be established. To this end, a combination of Gibbs free energy calculations, isotope fractionation and tracer measurements, and mass balances of metabolic intermediates (small pool sizes) and end products (large pool sizes) will be used. Measurements of these parameters on different scales using microelectrodes (mm scale), micro sampling devices for solutes and gases (cm scale) and mass flow balancing (column/reactor scale) will be compared to characterize unit volumes for organic matter degradation pathways and electron flow. Of particular interest will be the impact of redox active humic substances on the competitiveness of involved terminal electron accepting processes, either acting as electron shuttles or directly providing electron accepting capacity. This will be studied using fluorescence spectroscopy and parallel factor analysis (PARAFAC) of the gained spectra. We expect that the results will provide a basis for improving reactive transport models of anaerobic processes in aquifers and sediments.
Methoden des terrestrischen Carbon Dioxide Removal (tCDR) wie Aufforstung und Biomasseplantagen werden zuweilen als effektive, 'grüne' und sichere Varianten des Klimaengineering (CE) verstanden wegen ihrer Möglichkeit, die natürliche CO2-Aufnahme durch die Biosphäre zu erhöhen, und ihrer denkbaren ökonomischen Tragfähigkeit. Erkenntnisse aus der ersten Phase des CE-LAND-Projekts legen indes nahe, dass tCDR aufgrund schwieriger erdsystemischer und ethischer Fragen ebenso kontrovers wie andere CE-Methoden ist. CO2-Budgetierungen und rein ökonomische Bewertungen sind daher um profunde Analysen der natürlichen Begrenzungen, der Auswirkungen auf das Erdsystem mit damit verbundenen Unsicherheiten, der Tradeoffs mit anderen Land- und Wassernutzungen und der weitreichenden ethischen Implikationen von tCDR-Maßnahmen zu ergänzen. Analysen hypothetischer Szenarien der ersten Projektphase zeigen, dass effektives tCDR die Umwidmung großer Flächen voraussetzt, womit schwierige Abwägungsprozesse mit anderen Landnutzungen verbunden wären. Darüber hinaus zeigt sich, dass signifikante Nebenwirkungen im Klimasystem (außer der bezweckten Senkung der Weltmitteltemperatur) und in terrestrischen biogeochemischen Kreisläufen aufträten. CE-LAND+ bietet eine tiefergehende quantitative, räumlich explizite Evaluierung der nicht-ökonomischen Kosten einer Biosphärentransformation für tCDR. Potentielle Tradeoffs und Impakts wie auch die systematische Untersuchung von Unsicherheiten in ihrer Abschätzung werden mit zwei Vegetationsmodellen, einem Erdsystemmodell und, neu im Projekt, dynamischen Biodiversitätsmodellen analysiert. Konkret wird CE-LAND+ bisher kaum bilanzierte Tradeoffs untersuchen: einerseits zwischen der Maximierung der Flächennutzung für tCDR bzw. Biodiversitätsschutz, andererseits zwischen der Maximierung der Süßwasserverfügbarkeit für tCDR bzw. Nahrungsmittelproduktion sowie Flussökosysteme. Auch werden die (in)direkten Auswirkungen veränderten Klimas und tCDR-bedingter Landnutzungsänderungen auf Wasserknappheit (mit diversen Metriken und unter Annahme verschiedener Varianten des Wassermanagements) und Biodiversität quantifiziert. Die Tradeoffs und Impakts werden im Kontext von neben der Bekämpfung des Klimawandels formulierten globalen Nachhaltigkeitszielen - Biodiversitätsschutz, Wasser- und Ernährungssicherheit interpretiert - was sonst nicht im Schwerpunktprogramm vermittelt wird. Ferner wird das Projekt zu besserem Verständnis und besserer Quantifizierung von Unsicherheiten von tCDR-Effekten unter zukünftigem Klima beitragen. Hierzu untersucht es modellstrukturbedingte Unterschiede, Wachstum und Mortalität von tCDR-Pflanzungen unter wärmeren und CO2-reicheren Bedingungen und Wechselwirkungen zwischen tCDR-bezogenen Landnutzungsaktivitäten und Klima. Schließlich wird CE-LAND+ in Kooperationen innerhalb des Schwerpunktprogramms und mit einer repräsentativen Auswahl von Szenarien zur Evaluierung tCDR-bedingter Tradeoffs aus umweltethischer Sicht beitragen.
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