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Palaeo-Evo-Devo of Malacostraca - a key to the evolutionary history of 'higher' crustaceans

In my project I aim at a better understanding of the evolution of malacostracan crustaceans, which includes very different groups such as mantis shrimps, krill and lobsters. Previous studies on Malacostraca, on extant as well as on fossil representatives, focussed on adult morphology.In contrast to such approaches, I will apply a Palaeo-Evo-Devo approach to shed new light on the evolution of Malacostraca. Palaeo-Evo-Devo uses data of different developmental stages of fossil malacostracan crustaceans, such as larval and juvenile stages. With this approach I aim at bridging morphological gaps between the different diverse lineages of modern malacostracans by providing new insights into the character evolution in these lineages.An extensive number of larval and juvenile malacostracans is present in the fossil record, but which have only scarcely been studied. The backbone of this project will be on malacostracans from the Solnhofen Lithographic Limestones (ca. 150 million years old), which are especially well preserved and exhibit minute details. During previous studies, I developed new documentation methods for tiny fossils from these deposits, e.g., fluorescence composite microscopy, and also discovered the first fossil mantis shrimp larvae. For malcostracan groups that do not occur in Solnhofen, I will investigate fossils from other lagerstätten, e.g., Mazon Creek and Bear Gulch (USA), or Montceaules- Mines and La-Voulte-sur-Rhône (France). The main groups in focus are mantis shrimps and certain other shrimps (e.g., mysids, caridoids), as well as the bottom-living ten-footed crustaceans (reptantians). Examples for studied structures are leg details, including the feeding apparatus, but also eyes. The results will contribute to the reconstruction of 3D computer models.The data collected in this project will be used for evaluating the relationships within Malacostraca, but mainly for providing plausible evolutionary scenarios, how the modern malacostracan diversity evolved. With the Palaeo-Evo-Devo approach, I am also able to detect shifts in developmental timing, called heterochrony, which is interpreted as one of the major driving forces of evolution. Finally, the reconstructed evolutionary patterns can be compared between the different lineages for convergencies. These comparisons might help to explain the convergent adaptation to similar ecological niches in different malacostracan groups, e.g., life in the deep sea, life on the sea bottom, evolution of metamorphosis or of predatory larvae.As the project requires the investigation of a large number of specimens in different groups, I will assign distinct sub-projects to three doctoral researchers. The results of this project will not only be published in peer-reviewed journals, but will also be presented to the non-scientific public, e.g., during fossil fairs or museum exhibitions with 3D models engraved in glass blocks.

Forschergruppe (FOR) 1525: INUIT - Ice Nuclei research UnIT, Screening und Charakterisierung biologischer Eiskeime und Untersuchung deren Einflusses auf die Eiskeimaktivität von Boden-und Mineralstaub

Mikroorganismen sind im Boden, in kryptogamen Gemeinschaften und in der Atmosphäre von zentraler Bedeutung. Verschiedene Spezies von Bakterien, Pilzen, Flechten und Pollen wurden bereits als Eiskeime, welche eine Eisbildung bei relativ hohen Temperaturen initiieren können, identifiziert, und besonders biologische Bestandteile aus dem Boden sind eine vermutlich bedeutsame Quelle atmosphärischer Eiskeime. Die genauen Quellen biologischer Eiskeime in der Atmosphäre sind jedoch kaum bekannt, obwohl ein potentieller Beitrag dieser, zur Eis- und Niederschlagsbildung mittlerweile von verschiedenen Studien untermauert wird. Aktuelle Untersuchungen verschiedener Boden- und Luftproben zeigen Hinweise, dass verschiedene eisaktive Pilze unterschiedlicher Phyla nicht nur im Boden und in der Luft vorhanden sind, sondern auch häufig in der kultivierbaren Fraktion vorkommen können. Aus diesem Grund befasst sich das vorgeschlagene Projekt mit der Suche nach weiteren bisher unbekannten eisaktiven Mikroorganismen und Bestandteilen aus dem Boden, von Pflanzen und kryptogamen Gemeinschaften und mit der Erforschung ihres Einflusses auf die Eiskeimaktivität des Bodens. Die nötigen Methoden für ein Screening verschiedenster Kulturen z.B. von Cyanobakterien sind in unserem Labor gut etabliert. Zudem sollen die jeweiligen Eiskeime der neu gefundenen eisaktiven Organismen auf molekularer Ebene charakterisiert werden.

Sonderforschungsbereich (SFB) 607: Wachstum oder Parasitenabwehr? Wettbewerb um Ressourcen in Nutzpflanzen aus Land- und Forstwirtschaft, Teilprojekt B1: Allometrie und Raumbesetzung von krautigen und holzigen Pflanzen. Integration von Pflanzen- und Bestandesebene

Das Projekt B1 'Allometrie und Raumbesetzung von krautigen und holzigen Pflanzen' ist Teil des Sonderforschungsbereiches 607 Wachstum und Parasitenabwehr und befindet sich bereits in der vierten Phase des seit 1998 laufenden Forschungsprojektes. Bisher wurde im Projekt B1 die Allometrie als Resultat der pflanzeninternen Steuerung der Allokation untersucht. Auf Individuenebene wurden Allometrie und ihre Veränderung für verschiedene Baumarten in verschiedenen ontogenetischen Stadien untersucht. Auf Bestandesebene wurden die self-thinning-Linien von Yoda und Reineke für krautige bzw. holzige Pflanzenbestände analysiert. Bisherige Allometriebestimmungen erbrachten für diese Arten zwar ähnliche Größenordnung aber auch charakteristische Unterschiede, die Ausdruck spezifischer Strategien der Raumbesetzung und -ausbeutung widerspiegeln. Die bisher vereinzelten Auswertungen sollen in Phase IV in eine übergreifende Analyse (versch. Arten, ontogenetische Stadien, Konkurrenzsituationen, Störfaktoren) der Allometrie auf Pflanzen- und Bestandesebene münden.

Non-destructive characterization and monitoring of root structure and function at the rhizotron and field scale using spectral electrical impedance tomography (ImpTom)

This subproject aims at the development of spectral electrical impedance tomography (EIT) as a non-destructive tool for the imaging, characterization and monitoring of root structure and function in the subsoil at the field scale. The approach takes advantage of the capacitive properties of the soil-root interface associated with induced electrical polarization processes at the root membrane. These give rise to a characteristic electrical signature (impedance spectrum), which is measurable in an imaging framework using EIT. In the first project phase, the methodology is developed by means of controlled rhizotron experiments in the laboratory. The goal is to establish quantitative relationships between characteristics of the measured impedance spectra and parameters describing root system morphology, root growth and activity in dependence on root type, soil type and structure (with/without biopores), as well as ambient conditions. Parallel to this work, sophisticated EIT inversion algorithms, which take the natural characteristics of root system architecture into account when solving the inherent inverse problem, will be developed and tested in numerical experiments. Thus the project will provide an understanding of electrical impedance spectra in terms of root structure and function, as well as specifically adapted EIT inversion algorithms for the imaging and monitoring of root dynamics. The method will be applied at the field scale (central field trial in Klein-Altendorf), where non-destructive tools for the imaging and monitoring of subsoil root dynamics are strongly desired, but at present still lacking.

Development of a modelling system for prediction and regulation of livestock waste pollution in the humid tropics

Introduction: In Malaysia, excessive nutrients from livestock waste management systems are currently released to the environment. Particularly, large amounts of manure from intensive pig production areas are being excreted daily and are not being fully utilised. Alternatively, the excess manure can be applied as an organic fertiliser source in neighbouring cropping systems on the small landholdings of the pig farms to improve soil fertility so that its nutrients will be available for crop uptake instead of being discharged into water streams. Thus, there is a need for better tools to analyse the present situation, to evaluate and monitor alternative livestock production systems and manure management scenarios, and to support farmers in the proper management of manure and fertiliser application. Such tools are essential to quantify, and assess nutrient fluxes, manure quality and content, manure storage and application rate to the land as well as its environmental effects. Several computer models of animal waste management systems to assist producers and authorities are now available. However, it is felt that more development is needed to adopt such models to the humid tropics and conditions of Malaysia and other developing countries in the region. Objectives: The aim is to develop a novel model to evaluate nutrient emission scenarios and the impact of livestock waste at the landscape or regional level in humid tropics. The study will link and improve existing models to evaluate emission of N to the atmosphere, and leaching of nutrients to groundwater and surface water. The simulation outputs of the models will be integrated with a GIS spatial analysis to model the distribution of nutrient emission, leaching and appropriate manure application on neighbouring crop lands and as an information and decision support tool for the relevant users.

Biopores in the subsoil: Formation, nutrient turnover and effects on crops with distinct rooting systems (BioFoNT)

Perennial fodder cropping potentially increases subsoil biopore density by formation of extensive root systems and temporary soil rest. We will quantify root length density, earthworm abundance and biopore size classes after Medicago sativa, Cichorium intybus and Festuca arundinacea grown for 1, 2 and 3 years respectively in the applied research unit's Central Field Trial (CeFiT) which is established and maintained by our working group. Shoot parameters including transpiration, gas exchange and chlorophyll fluorescence will frequently be recorded. Precrop effects on oilseed rape and cereals will be quantified with regard to crop yield, nutrient transfer and H2-release. The soil associated with biopores (i.e. the driloshpere) is generally rich in nutrients as compared to the bulk soil and is therefore supposed to be a potential hot spot for nutrient acquisition. However, contact areas between roots and the pore wall have been reported to be low. It is still unclear to which extent the nutrients present in the drilosphere are used and which potential relevance subsoil biopores may have for the nutrient supply of crops. We will use a flexible videoscope to determine the root-soil contact in biopores. Nitrogen input into the drilosphere by earthworms and potential re-uptake of nitrogen from the drilosphere by subsequent crops with different rooting systems (oilseed rape vs. cereals) will be quantified using 15N as a tracer.

Forest vegetation development in the Bavarian Forest National Park following the 1983 windfall event

In the Bavarian Forest National Park a brief, but intense storm event on 1 August 1983 created large windfall areas. The windfall ecosystems within the protection zone of the park were left develop without interference; outside this zone windfall areas were cleared of dead wood but not afforested. A set of permanent plots (transect design with 10 to 10 m plots) was established in 1988 in spruce forests of wet and cool valley bottoms in order to document vegetation development. Resampling shall take place every five years; up to now it was done in 1993 and 1998. On cleared areas an initial raspberry (Rubus idaeus) shrub community was followed by pioneer birch (Betula pubescens, B. pendula) woodland, a sequence well known from managed forest stands. In contrast to this, these two stages were restricted to root plates of fallen trees in uncleared windfalls; here shade-tolerant tree species of the terminal forest stages established rather quickly from saplings that had already been present in the preceeding forest stand. Soil surface disturbances are identified to be causal to the management pathway of forest development, wereas the untouched pathway is caused by relatively low disturbance levels. The simulation model FORSKA-M is used to analyse different options of further stand development with a simulation time period of one hundred years.

Release of hexavalent chromium from ore processing residues and the potential of biochar for chromium immobilization in polluted soils

Chromium (Cr) is introduced into the environment by several anthropogenic activities. A striking ex-ample is the area around Kanpur in the Indian state of Uttar Pradesh, where large amounts of Cr-containing wastes have been recently illegally deposited. Hexavalent Cr, a highly toxic and mobile contaminant, is present in significant amounts in these wastes, severely affecting the quality of sur-roundings soils, sediments, and ground waters. The first major goal of this study is to clarify the solid phase speciation of Cr in these wastes and to examine its leaching behavior. X-ray diffraction and synchrotron-based X-ray absorption spectroscopy techniques will be employed for quantitative solid phase speciation of Cr. Its leaching behavior will be studied in column experiments performed at un-saturated moisture conditions with flow interruptions simulating monsoon rain events. Combined with geochemical modeling, the results will allow the evaluation of the leaching potential and release kinetics of Cr from the waste materials. The second major goal is to investigate the spatial distribution, speciation, and solubility of Cr in the rooting zone of chromate-contaminated soils surrounding the landfills, and to study the suitability of biochar as novel soil amendment for mitigating the deleterious effects of chromate pollution. Detailed field samplings and laboratory soil incubation studies will be carried out with two agricultural soils and biochar from the Kanpur region.

Late-Glacial and Holocene vegetational stability of southern South America

This project focuses on the long-term stability (or otherwise) of vegetation, based on a series of multi-proxy records in southern South America. We will build a network of sites suitable for high-resolution reconstructions of changes in vegetation since the Last Glacial Maximum, and use these to test a null hypothesis that changes in vegetation over the past 14,000 years are driven by internal dynamics rather than external forcing factors. The extent to which the null hypothesis can be falsified will reveal the degree to which we can expect to be able to predict how vegetation is affected by external events, including future climate change. The southern fringes of the South American landmass provide a rare opportunity to examine the development of moorland vegetation with sparse tree cover in a wet, cool temperate climate of the Southern Hemisphere. We present a record of changes in vegetation over the past 17,000 years, from a lake in extreme southern Chile (Isla Santa Inés, Magallanes region, 53°38.97S; 72°25.24W; Fontana, Bennett 2012: The Holocene), where human influence on vegetation is negligible. The western archipelago of Tierra del Fuego remained treeless for most of the Lateglacial period. Nothofagus may have survived the last glacial maximum at the eastern edge of the Magellan glaciers from where it spread southwestwards and established in the region at around 10,500 cal. yr BP. Nothofagus antarctica was likely the earlier colonizing tree in the western islands, followed shortly after by Nothofagus betuloides. At 9000 cal. yr BP moorland communities expanded at the expense of Nothofagus woodland. Simultaneously, Nothofagus species shifted to dominance of the evergreen Nothofagus betuloides and the Magellanic rain forest established in the region. Rapid and drastic vegetation changes occurred at 5200 cal. yr BP, after the Mt Burney MB2 eruption, including the expansion and establishment of Pilgerodendron uviferum and the development of mixed Nothofagus-Pilgerodendron-Drimys woodland. Scattered populations of Nothofagus, as they occur today in westernmost Tierra del Fuego may be a good analogue for Nothofagus populations during the Lateglacial in eastern sites. Climate, dispersal barriers and/or fire disturbance may have played a role controlling the postglacial spread of Nothofagus. Climate change during the Lateglacial and early Holocene was a prerequisite for the expansion of Nothofagus populations and may have controlled it at many sites in Tierra del Fuego. The delayed arrival at the site, with respect to the Holocene warming, may be due to dispersal barriers and/or fire disturbance at eastern sites, reducing the size of the source populations. The retreat of Nothofagus woodland after 9000 cal. yr BP may be due to competitive interactions with bog communities. Volcanic disturbance had a positive influence on the expansion of Pilgerodendron uviferum and facilitated the development of mixed Nothofagus-Pilgerodendron-Drimys woodland.

Design and analysis of unreplicated plant breeding trials

Early generation plant breeding trials are often laid out according to unreplicated designs. Replicated checks may be used for error control, for example in augmented designs based on an incomplete block design for checks which are augmented with unreplicated entries. Traditional augmented designs require considerable resources to be spent on genotypes that are not themselves of interest. Therefore, it has been suggested to replace checks with partially replicated entries, leading to so-called prep designs. In the present proposal we suggest combining both ideas to develop what we call augmented prep designs. A non-trivial design problem arises when trials are to be performed at multiple locations. The main challenge then is how to augment the blocks so as to balance the number of pairwise concurrences. This task can be tackled in different ways based on the use (-arrays which are well-known as the basis for (-designs in fully replicated experiments. Furthermore, we also explore the refinement of designs when analysis by spatial models is envisioned. Robustness of the designs to the presence of genotype-environment interaction is also investigated.

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