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The depositional flux of meteoric 10Be derived from combined in situ and meteoric 10Be analyses along a climate gradient (Chile)

This dataset contains Beryllium isotope data, pH measurements, and calculations of surface process rates (denudation, weathering, erosion) from soil and drill core samples from the Coastal Cordillera, Chile. All drilling and soil sampling campaigns were conducted in the framework of the “EarthShape” project (DFG SPP1803) from March 2019 to March 2020. Rock and soil samples consist of granitoid lithology that is weathered to different degrees. We measured the concentration of in situ 10Be in quartz samples from soil samples and calculated denudation rates thereof. Furthermore, we applied a sequential extraction method to analyse meteoric 10Be and reactive 9Be; we also measured residual 9Be and parent bedrock 9Be concentrations. Using the concentration of meteoric 10Be, we calculated the inventory assuming exponential decrease with depth. Finally, we calculated the depositional flux using the in situ 10Be denudation rate and the 10Be(meteoric)/9Be isotope ratio. From reactive 9Be, we calculated the fraction of reactive and dissolved 9Be that we interpret as weathering indicator. All samples are indicated with a IGSN (International Generic Sample Number) which is a global unique sample identifier. These IGSNs are provided in the data tables and are linked to a short data description in the internet.

Quantitative DNA data extracted from four different soils and two subsurface rock samples

This data publication presents quantitative DNA data obtained through fluorometric detection of genomic DNA and the estimation of 16S rRNA gene copies using quantitative Polymerase Chain Reaction (qPCR). The data encompasses various soil and rock samples collected across a climate gradient. The DNA was extracted using a protocol enabling the separate analysis of intracellular DNA (iDNA) and extracellular DNA (eDNA) from the same sample. The primary objective of this study was to enhance a previously established method developed by Alawi et al. (2014) for analyzing terrestrial samples by introducing modifications to the extraction buffer. Phosphate buffers at two different concentrations (120 mM and 300 mM), EDTA (300 mM), and a high-concentration phosphate buffer in combination with EDTA (300 mM each) were tested in conjunction with a detergent mix (detailed in Medina et al., 2023; submitted). Thorough tests, including spiked DNA experiments and cell counts, were conducted on one low biomass sample to validate the extraction setups. The two most effective extraction protocols were then applied to all samples from the four designated sites and compared with the phosphate buffer described by Alawi et al. (2014), resulting in the calculation of improvement factors. The resulting dataset provides valuable quantitative DNA information and estimates of 16S rRNA gene copies across diverse soil and rock samples along a climate gradient. The modifications made to the extraction buffer demonstrated improved efficiency in extracting especially iDNA compared to the original method. These findings contribute to the refinement and optimization of DNA extraction protocols for terrestrial samples, enabling more accurate and comprehensive analyses of microbial communities in different environments.

Burrowing vertebrates and invertebrates and their characteristics in Chile

We compiled available information for burrowing animals in Chile in two tables: "2020-042_Uebernickel-et-al_Vertebrates" and "2020-042_Uebernickel-et-al_Invertebrates". A discussion about burrowing vertebrates and invertebrates and the effect of the communities at selected sites in arid to humid Chile is given in Übernickel et al. (in review): Quantification of animal burrowing volumes on hillslopes along a climate gradient, Chile. The purpose of these tables is to provide an overview of burrowing vertebrates and invertebrate species in Chile. The degree of known details of their natural history varies and is often minimal. For invertebrates, the majority of the published work is taxonomic or descriptive that hardly encounter biologic or ecologic aspects of the respective species. The geographic distribution of most invertebrate species remains largely unknown, as they have been topic of single investigations at specific research sites in Chile. The tables are intended as starting point for follow up research. Quantification of distributional ranges, density, excavation rates, burrow or gallery dimensions and further parameters of these species, is important to quantify the biotic influence they have on a landscape level. From publications mostly treating single species, we have compiled this comprehensive dataset of 45 digging or soil-moving vertebrate and 345 invertebrate species. It includes a list of species names with morphological digging adaptations and species observed to dig. In vertebrates excavating behavior is documented for mammals, lizards and birds. In invertebrates, excavating behavior is mentioned for Chilean spiders, scorpions, camel spider, beetles, cicadas, wasps, bees, ants, a termite and antlions. Chile is characterized by an endemic fauna, especially true for arthropods, with limited distributional ranges. Currently, these largely still unknown species are under thread of extinction by the destruction of habitats, desertification and climate change. We encourage specialists to add information to this first compilation.

Time series of meteorological station data in the EarthShape study areas of in the Coastal Cordillera, Chile

The DFG Priority Program 1803 "EarthShape - Earth Surface Shaping by Biota” (www.earthshape.net, short description of the project below) installed a meteorological station network consisting of four stations between ~26 °S to ~38 °S in the Coastal Cordillera of Chile, South America. The stations are intended to provide baseline meteorological data along the climate and ecological gradient investigated in the EarthShape program. The stations are located in the EarthShape study areas, encompassing desert, semi-desert, mediterranean, and temperate climate zones. Each station is configured to include sensors that record precipitation at ground level, radiation at 2.8 m height, wind at 3 m height, 25 cm depth soil temperature, soil water content and bulk electrical conductivity, 2 m air temperature and relative humidity, and barometric pressure at 30-minute intervals. The data recording started in March/April 2016. The EarthShape project runs until December 2021. Data collection will continue until that date, and potentially longer depending on available funds. This publication provides two sets of data: raw data and processed data. The raw data contains 2 file types per meteorological station: (1) all measured parameters of the whole dataset measured in 30 minutes intervals as downloaded from the station. Furthermore, we provide (2) one table per station of high-resolution precipitation events, measured in 5 min. intervals that were triggered during rain events at each station. The processed data consists of a continuous timeseries of observations since the activation of each station. The processing consists of the exclusion of erroneous data, caused by maintenance of the weather-stations and sporadic malfunction of sensors detected during data screening. The excluded data is communicated in a logfile (excel table), comments from data screening, solar eclipse and others are summarized in history files (ASCII ). the full description of the data and methods is provided in the data description file (Data description file). ----------------------- Version history: 16 January 2023 (Version 1.1): Alexander Beer included as additional author, addition of new data from 2020-04-14 bis 2022-10-10. All files of the first version are moved to the "previous-versions" folder. 09 October 2023 (Version 1.2): Addition of new time series data to 2023-07-31. Detailed changelog information can be found in the “History” files in the respective subfolders for each site.

Literature based inventory of plant species from four locations along the Chilean Coastal Cordillera, 26 – 38°S

The data consists of four vascular plant species lists, one per study site. The site selection is based on the four study areas of the DFG Priority Program 1803 "EarthShape - Earth Surface Shaping by Biota” (www.earthshape.net), namely: arid climate National Park Pan de Azúcar, semi-arid climate Private Reserve Santa Gracia, mediterranean climate National Park La Campana and humid-temperate climate National Park Nahuelbuta in Chile, South America. Each list is a table with (mostly) terrestrial vascular plant species names that have been reported in a variety of sources at the selected sites and the corresponding administrative or biogeographical regions of Chile. The available literature sources varied from specific national park flora lists to Chilean flora books and catalogues and thus, the present lists represent a potential vegetation for the EarthShape study areas. Each table includes the plants’ Latin name, clade taxonomy, the plant growth form as well as the origin. The taxonomy of the vegetation species was updated to the taxonomic information available up to August 2023 from Chilean and South American vascular flora lists.

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