The relevance of biogeochemical gradients for turnover of organic matter and contaminants is yet poorly understood. This study aims at the identification and quantification of the interaction of different redox processes along gradients. The interaction of iron-, and sulfate reduction and methanogenesis will be studied in controlled batch and column experiments. Factors constraining the accessibility and the energy yield from the use of these electron acceptors will be evaluated, such as passivation of iron oxides, re-oxidation of hydrogen sulfide on iron oxides. The impact of these constraints on the competitiveness of the particular process will then be described. Special focus will be put on the evolution of methanogenic conditions in systems formerly characterized by iron and sulfate reducing condition. As methanogenic conditions mostly evolve from micro-niches, methods to study the existence, evolution and stability of such micro-niches will be established. To this end, a combination of Gibbs free energy calculations, isotope fractionation and tracer measurements, and mass balances of metabolic intermediates (small pool sizes) and end products (large pool sizes) will be used. Measurements of these parameters on different scales using microelectrodes (mm scale), micro sampling devices for solutes and gases (cm scale) and mass flow balancing (column/reactor scale) will be compared to characterize unit volumes for organic matter degradation pathways and electron flow. Of particular interest will be the impact of redox active humic substances on the competitiveness of involved terminal electron accepting processes, either acting as electron shuttles or directly providing electron accepting capacity. This will be studied using fluorescence spectroscopy and parallel factor analysis (PARAFAC) of the gained spectra. We expect that the results will provide a basis for improving reactive transport models of anaerobic processes in aquifers and sediments.
During microbial turnover of organic chemicals in soil, non-extractable residues (NER) are formed frequently. Studies on NER formation usually performed with radioisotope labelled tracer compounds are limited to localisation and quantitative analyses but their chemical composition is left unknown. Recently, we could show for 2,4-dichlorophenoxyacetic acid and ibuprofen that during microbial turnover in soil nearly all NER were derived from microbial biomass, since degrading bacteria use the pollutant carbon for their biomass synthesis. Their cell debris is subsequently stabilised within soil organic matter (SOM) forming biogenic NER (bioNER). It is still unknown whether bioNER are also formed during biodegradation of other, structurally different compound classes of organic contaminants. Therefore, agricultural soil will be incubated with labelled compounds of five classes of commonly used and emerging pesticides: organophosphate, phenylurea, triazinone, benzothiadiazine and aryloxyphenoxypropionic acid. The fate of the label will be monitored in both living and non-living SOM pools and the formation of bioNER will be quantified for each compound over extended periods of time. In addition, soil samples from long-term lysimeter studies with 14C-labelled pesticide residues (e.g. triazine, benzothiazole and phenoxypropionic acid group) will be also analysed for bioNER formation. The results will be summarised to identify the metabolic conditions of microorganisms needed for bioNER formation and to develop an extended concept of risk assessment including bioNER formation in soils.
It is well established that reduced supply of fresh organic matter, interactions of organic matter with mineral phases and spatial inaccessibility affect C stocks in subsoils. However, quantitative information required for a better understanding of the contribution of each of the different processes to C sequestration in subsoils and for improvements of subsoil C models is scarce. The same is true for the main controlling factors of the decomposition rates of soil organic matter in subsoils. Moreover, information on spatial variabilities of different properties in the subsoil is rare. The few studies available which couple near and middle infrared spectroscopy (NIRS/MIRS) with geostatistical approaches indicate a potential for the creation of spatial maps which may show hot spots with increased biological activities in the soil profile and their effects on the distribution of C contents. Objectives are (i) to determine the mean residence time of subsoil C in different fractions by applying fractionation procedures in combination with 14C measurements; (ii) to study the effects of water content, input of 13C-labelled roots and dissolved organic matter and spatial inaccessibility on C turnover in an automatic microcosm system; (iii) to determine general soil properties and soil biological and chemical characteristics using NIRS and MIRS, and (iv) to extrapolate the measured and estimated soil properties to the vertical profiles by using different spatial interpolation techniques. For the NIRS/MIRS applications, sample pretreatment (air-dried vs. freeze-dried samples) and calibration procedures (a modified partial least square (MPLS) approach vs. a genetic algorithm coupled with MPLS or PLS) will be optimized. We hypothesize that the combined application of chemical fractionation in combination with 14C measurements and the results of the incubation experiments will give the pool sizes of passive, intermediate, labile and very labile C and N and the mean residence times of labile and very labile C and N. These results will make it possible to initialize the new quantitative model to be developed by subproject PC. Additionally, we hypothesize that the sample pretreatment 'freeze-drying' will be more useful for the estimation of soil biological characteristics than air-drying. The GA-MPLS and GA-PLS approaches are expected to give better estimates of the soil characteristics than the MPLS and PLS approaches. The spatial maps for the different subsoil characteristics in combination with the spatial maps of temperature and water contents will presumably enable us to explain the spatial heterogeneity of C contents.
Unsere konzeptionelle Sicht des P-Kreislaufes in Waldökosystemen beruht auf der Untersuchung von P-Pools, den Zusammenhängen zwischen verschiedenen P-Pools und zu einem geringen Anteil von P-Flüssen. Bisherige Arbeiten konnten aber nicht die Prozesse aufdecken, die ein Phosphatmolekül auf ökosystemarer Skala durchlief. Zum Beispiel sind die oben genannten Ansätze nicht geeignet, um zwischen der Freisetzung aus einem Mineral oder aus einer organischen Verbindung zu unterscheiden. Die Untersuchung des Sauerstoffisotopenverhältnisses in Phosphat könnte diese Informationen liefern. Unser Ziel ist es, die Wichtigkeit biologischer und geochemischer Prozesse, die den P-Kreislauf in 4 Waldökosystemen kontrollieren, entlang eines Gradienten der P-Verfügbarkeit im Boden zu untersuchen. Wir werden den Verbleib von Phosphat i) im Kreislauf vom Streufall-P über P-Freisetzung während des Abbaus organischer Substanz in der organischen Auflage und im Boden bis hin zur Aufnahme durch die Pflanzen und ii) während der Freisetzung aus P-haltigen Mineralen im Boden und der anschließenden Aufnahme in die Pflanzen verfolgen. Wir werden Mulit-Isotopenansätze (O im Wasser, P and O in Phosphat, C in der organischen Substanz) nutzen, die wir innovativ verbinden, um unsere Forschungsfragen zu beantworten. Für das tiefgreifende Verständnis des P-Kreislaufes während des Abbaus von organischer Substanz werden wir uns auf folgende experimentelle Ansätze stützen: i) Messungen in den etablierten Waldsystemen (Output 1), ii) Laborinkubationen der organischen Auflage und des Mineralbodens (Outputs 2 und 3) sowie iii) Topfexperimente mit wachsenden Pflanzen (Outputs 4 und 5). Unser Projekt wird zur Verifizierung der allgemeinen Hypothese des SPP-Programmes beitragen, dass die mit der Zeit sinkende P-Verfügbarkeit die Waldökosysteme von Mobilisierungs- (effiziente Mobilisierung aus der Mineralphase) zu Recycling-Systemen (sehr effizientes Recycling von P) verschiebt.
Der Datensatz beinhaltet Informationen zum Gewässernetz im Freistaat Sachsen. Er bildet Wasserkörper, Feuchtgebiete sowie Bauwerke an Gewässern und interessante hydrologische Punkte ab.
Dissolved organic matter (DOM) is one major source of subsoil organic matter (OM). P5 aims at quantifying the impact of DOM input, transport, and transformation to the OC storage in the subsoil environment. The central hypotheses of this proposal are that in matric soil the increasing 14C age of organic carbon (OC) with soil depth is due to a cascade effect, thus, leading to old OC in young subsoil, whereas within preferential flowpaths sorptive stabilization is weak, and young and bioa-vailable DOM is translocated to the subsoil at high quantities. These hypotheses will be tested by a combination of DOC flux measurements with the comparative analysis of the composition and the turnover of DOM and mineral-associated OM. The work programme utilizes a DOM monitoring at the Grinderwald subsoil observatory, supplemented by defined experiments under field and labora-tory conditions, and laboratory DOM leaching experiments on soils of regional variability. A central aspect of the experiments is the link of a 13C-leaf litter labelling experiment to the 14C age of DOM and OM. With that P5 contributes to the grand goal of the research unit and addresses the general hypotheses that subsoil OM largely consists of displaced and old OM from overlying horizons, the sorption capacity of DOM and the pool size of mineral-associated OM are controlled by interaction with minerals, and that preferential flowpaths represent 'hot spots' of high substrate availability.
For surface soils, the mechanisms controlling soil organic C turnover have been thoroughly investigated. The database on subsoil C dynamics, however, is scarce, although greater than 50 percent of SOC stocks are stored in deeper soil horizons. The transfer of results obtained from surface soil studies to deeper soil horizons is limited, because soil organic matter (SOM) in deeper soil layers is exposed to contrasting environmental conditions (e.g. more constant temperature and moisture regime, higher CO2 and lower O2 concentrations, increasing N and P limitation to C mineralization with soil depth) and differs in composition compared to SOM of the surface layer, which in turn entails differences in its decomposition. For a quantitative analysis of subsoil SOC dynamics, it is necessary to trace the origins of the soil organic compounds and the pathways of their transformations. Since SOM is composed of various C pools which turn over on different time scales, from hours to millennia, bulk measurements do not reflect the response of specific pools to both transient and long-term change and may significantly underestimate CO2 fluxes. More detailed information can be gained from the fractionation of subsoil SOM into different functional pools in combination with the use of stable and radioactive isotopes. Additionally, soil-respired CO2 isotopic signatures can be used to understand the role of environmental factors on the rate of SOM decomposition and the magnitude and source of CO2 fluxes. The aims of this study are to (i) determine CO2 production and subsoil C mineralization in situ, (ii) investigate the vertical distribution and origin of CO2 in the soil profile using 14CO2 and 13CO2 analyses in the Grinderwald, and to (iii) determine the effect of environmental controls (temperature, oxygen) on subsoil C turnover. We hypothesize that in-situ CO2 production in subsoils is mainly controlled by root distribution and activity and that CO2 produced in deeper soil depth derives to a large part from the mineralization of fresh root derived C inputs. Further, we hypothesize that a large part of the subsoil C is potentially degradable, but is mineralized slower compared with the surface soil due to possible temperature or oxygen limitation.
It has been suggested that dying and decaying fine roots and root exudation represent important, if not the most important, sources of soil organic carbon (SOC) in forest soils. This may be especially true for deep-reaching roots in the subsoil, but precise data to prove this assumption are lacking. This subproject (1) examines the distribution and abundance of fine roots (greater than 2 mm diameter) and coarse roots (greater than 2 mm) in the subsoil to 240 cm depth of the three subsoil observatories in a mature European beech (Fagus sylvatica) stand, (2) quantifies the turnover of beech fine roots by direct observation (mini-rhizotron approach), (3) measures the decomposition of dead fine root mass in different soil depths, and (4) quantifies root exudation and the N-uptake potential with novel techniques under in situ conditions with the aim (i) to quantify the C flux to the SOC pool upon root death in the subsoil, (ii) to obtain a quantitative estimate of root exudation in the subsoil, and (iii) to assess the uptake activity of fine roots in the subsoil as compared to roots in the topsoil. Key methods applied are (a) the microscopic distinction between live and dead fine root mass, (b) the estimation of fine and coarse root age by the 14C bomb approach and annual ring counting in roots, (c) the direct observation of the formation and disappearance of fine roots in rhizotron tubes by sequential root imaging (CI-600 system, CID) and the calculation of root turnover, (d) the measurement of root litter decomposition using litter bags under field and controlled laboratory conditions, (e) the estimation of root N-uptake capacity by exposing intact fine roots to 15NH4+ and 15NO3- solutions, and (f) the measurement of root exudation by exposing intact fine root branches to trap solutions in cuvettes in the field and analysing for carbohydrates and amino acids by HPLC and Py-FIMS (cooperation with Prof. A. Fischer, University of Trier). The obtained data will be analysed for differences in root abundance and activity between subsoil (100-200 cm) and topsoil (0-20 cm) and will be related to soil chemical and soil biological data collected by the partner projects that may control root turnover and exudation in the subsoil. In a supplementary study, fine root biomass distribution and root turnover will also be studied at the four additional beech sites for examining root-borne C fluxes in the subsoil of beech forests under contrasting soil conditions of different geological substrates (Triassic limestone and sandstone, Quaternary sand and loess deposits).
To predict ecosystem reactions to elevated atmospheric CO2 (eCO2) it is essential to understandthe interactions between plant carbon input, microbial community composition and activity and associated nutrient dynamics. Long-term observations (greater than 13 years) within the Giessen Free Air Carbon dioxide Enrichment (Giessen FACE) study on permanent grassland showed next to an enhanced biomass production an unexpected strong positive feedback effect on ecosystem respiration and nitrous oxide (N2O) production. The overall goal of this study is to understand the long-term effects of eCO2 and carbon input on microbial community composition and activity as well as the associated nitrogen dynamics, N2O production and plant N uptake in the Giessen FACE study on permanent grassland. A combination of 13CO2 pulse labelling with 15N tracing of 15NH4+ and 15NO3- will be carried out in situ. Different fractions of soil organic matter (recalcitrant, labile SOM) and the various mineral N pools in the soil (NH4+, NO3-, NO2-), gross N transformation rates, pool size dependent N2O and N2 emissions as well as N species dependent plant N uptake rates and the origin of the CO2 respiration will be quantified. Microbial analyses will include exploring changes in the composition of microbial communities involved in the turnover of NH4+, NO3-, N2O and N2, i.e. ammonia oxidizing, denitrifying, and microbial communities involved in dissimilatory nitrate reduction to ammonia (DNRA). Stable Isotope Probing (SIP) and mRNA based analyses will be employed to comparably evaluate the long-term effects of eCO2 on the structure and abundance of these communities, while transcripts of these genes will be used to target the fractions of the communities which actively contribute to N transformations.
Es ist allgemein bekannt, dass andere Wasserstoffpools neben Bodenfeuchte die Neutronenzählrate von 'cosmic-ray neutron sensing' (CRNS) Detektoren beeinflussen. Bisher wurden diese zusätzlichen Pools meist als störende Einflüsse betrachtet, die korrigiert werden müssen. Dafür wurden verschiedene Ansätze zur Korrektur von Wasserstoff entwickelt, welcher zum Beispiel im Kristallwasser, in der organischen Substanz des Bodens, in der Atmosphäre oder in der Biomasse gespeichert ist. Es wurde gezeigt, dass solche Korrekturen wesentlich sind, um die Genauigkeit der mit CRNS erhaltenen SWC-Schätzungen zu verbessern. Aktuelle Publikationen zeigen, dass das Verhältnis von thermalen zu schnellen Neutronen (Nr) zur Schätzung von Biomasse genutzt werde kann und außerdem Informationen zu zeit-variablen Wasserstoffpools enthält. Beides soll im Rahmen des Forschungsmoduls VG untersucht werden. Das Projekt verfolgt zwei Hauptziele. Zunächst wollen wir universell gültige Methoden zur Korrektur von CRNS-basierten Bodenfeuchtemessungen für den Einfluss von zeit-variablen Wasserstoffpools wie Biomasse und Interzeption entwickeln. Dazu werden empirische Funktionen basierend auf zusätzlichen Messungen, wie Pflanzenparametern und Throughfall, getestet und kalibriert. Diese Messungen werden mit einem gekoppelten Boden-Vegetations-Modell integriert, das außerdem die Simulation des Interzeptionsspeichers ermöglicht. Zweitens, wollen wir Methoden entwickeln, um die Wasserstoffpools direkt aus dem CRNS-Signal - ohne zusätzliche Messungen und Kalibrierung - zu schätzen. Dazu werden wir die Verwendung des Nr untersuchen. Unter Verwendung geeigneter Neutronenenergie-Korrekturen werden wir verbesserte thermale und epithermale Neutronen-Signale erhalten, was eine bessere Untersuchung von Biomasse- und Interzeptionseffekten auf das Nr-Signal ermöglicht. Um diese Ziele zu erreichen, werden wir drei Arten von Feldexperimenten durchführen: a) dedizierte kontinuierliche Experimente an repräsentativen landwirtschaftlichen Standorten, b) Feldmesskampagnen einer Vielzahl von Feldern mit verschiedenen Nutzpflanzen mit dem Jülich Cosmic Rover und c) Analyse von Neutronen- und Biomassedaten aus dem bestehenden TERENO CRNS-Netzwerk. Die Messungen im Rahmen der Feldexperimente werden durch bodenhydrologische Modellierungen ergänzt, um Referenzinformationen mit verbesserter räumlicher und zeitlicher Auflösung zu erhalten (z.B. vertikale Verteilung von Bodenfeuchte im Profil; Auftreten von Stauwasser auf der Bodenoberfläche).Das Forschungsmodul VG wird gemessene Vegetationsparameter für die gemeinsamen Feldkampagnen (JFC) liefern, die insbesondere von RV, MC, HG und RS benötigt werden. In Zusammenarbeit mit NS wird der Einfluss von Biomasse und Interzeption auf das Nr modelliert. Durch DD verbesserte CRNS-Sensoren, werden für eine verbesserte Quantifizierung der Interzeption verwendet.
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