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Continuous bio-optical measurements of chloropyll a and turbidity along RV MARIA S. MERIAN cruise MSM97/2

Underway bio-optical sensor measurements of chlorophyll a and turbidity were acquired along the cruise track of RV MARIA S. MERIAN cruise MSM97/2. Measurements were collected with two autonomous measurement systems (RSWS), which are located at 6.5 m below the sea surface. Usually, the RWS-System with measuring container 1 and 2 (MC1 and MC2) interchanged after 6 hours. Only en route data was collected and quality controlled. No data from stationary measurements (in situ) were included. Quality Control specifically for biogeochemical measurements had been applied. For details to all processing steps see Data Processing Report.

FerryBox-integrated membrane-based pCO2, temperature, salinity, oxygen, chlorophyll, turbidity and pH measurements of BU-C-2110 during RV Burchana cruise

The submitted data were collected with a FerryBox-Device on RV Burchana in the transitional and coastal waters of Lower Saxony, Germany. It contains data for temperature, salinity, pH, chlorophyll, oxygen, turbidity and carbon dioxide partial pressure (pCO2) at a water depth of approximately 1.3 m. Within the Carbostore project, totally 8 measurement campaigns were carried out in the years 2021 to 2023. The data is reprocessed and related to a 60 s period. In order to obtain a complete (but rough) overview of the pCO2 situation in this area, values outside the calibration limits (200-1000 µatm) were retained. Dissolved oxygen measurements were corrected by temperature and salinity. The sensors are regularly calibrated, maintained and replaced if necessary. The files are named according to the project, the year and the month of the campaign.

Ferrybox underway observations of physical and optical surface water variables during HE626/2 from 2023-10-27 to 2023-11-07

The data presented here were collected during the cruise HE626-2 with RV Heincke from Bremerhaven to Bremerhaven (2023-10-27 to 2023-11-07). The water intake of the autonomous measurement system was in approx. 3 m depth. All data have been subjected to automated quality checks (see processing report) and visual control. The chlorophyll-a data were additionally calibrated by comparison with discrete samples. Details on all quality control steps and the calibration can be found in the data processing report. The resulting data set contains the quality-controlled data and corresponding quality flags. The data set contains data during transect and station. The rawdata are also available on request from the principal investigator.

Methane measurements at lander_2 in a coastal peatland at the German Baltic Sea in 2021

Rewetting peatlands is an important measure to reduce greenhouse gas (GHG) emissions. However, after rewetting, the areas are highly heterogeneous in terms of GHG exchange, which depends on water level and source, vegetation, previous use, and duration of rewetting. These challenging conditions require new technologies that go beyond discrete sampling. Here we present data from two autonomous lander platforms deployed at the sediment-water interface (bottom lander) of a shallow coastal peatland (approx. 1 m water depth) that was rewetted by brackish water from the Baltic Sea, thus becoming part of the coastal water through a permanent connection. These landers were equipped with six commercially available state-of-the-art sensors, and temporal high-resolution measurements of physico-chemical variables, including partial pressures of carbon dioxide (CO2) and methane (CH4), were made. The resolution of the field data ranged from 10 seconds to 120 minutes and was obtained for partial pressure of CO2 (Contros HydroC-CO2) and CH4 (Contros HydroC-CH4), temperature, salinity, pressure (water depth), oxygen (O2) (CTD-O2 with SBE-37SMP-ODO), the concentrations of phosphate (SBE HydroCycle PO4), nitrate (SBE SUNA V2), chlorophyll a and the turbidity (both with SBE-FLNTUSB ECO) as stationary measurements at two different locations in close proximity. The CTD and oxygen measurements provide exact water depth data for the respective lander locations. In the other data sets (e.g., CO2 measurements) rounded data are inserted instead of the exact depth data, which is 0.6 m for lander_1 and 0.9 m for lander_2. SUNA raw data are provided for completeness. However, we found them of insufficient quality to estimate nitrate concentrations due to interferences and biofouling. The deployment and recovery of the landers, and thus the measurements, took place between 02 June 2021 and 09 August 2021, and the sensors were operated under permanent wired power supply and a centralized timestamp. The sensors were maintained and cleaned bi-weekly. Results show considerable temporal fluctuations expressed as multi-day, diurnal, and event-based variability, with spatial differences caused by biologically-dominated variables.

Continuous optical chlorophyll-a and turbidity data along RV MARIA S. MERIAN cruise MSM129/1

Underway optical chlorophyll-a and turbidity data were collected along the cruise track with Sea-Bird Scientific ECO FLNTU sensors installed within two autonomous measurement containers, as part of the "Reinseewassersystem" (RSWS). The containers measure alternatingly. While one container is measuring, the other one is being cleaned. The boxes switched generally every 12 hours. The water inlet for the RSWS is at about 6.5 m below sea surface. Observed chlorophyll-a and turbidity data were both quality controlled. Analysis of the chlorophyll-a and turbidity data during parallel operation of the sensors in the two boxes showed significant differences between the sensors. The sensors were aligned resulting in consistent chlorophyll-a and turbidity time series. The corrected chlorophyll-a data were calibrated based on chlorophyll-a values from discrete water samples taken from a RSWS water outlet in the hangar. Samples were frozen and measured fluorometrically in the lab. The time series was separated into two sections, coastal and open ocean, which were calibrated independently. The turbidity time series was also compared to suspended particulate matter from water samples, however, correlation was low and therefore the comparison not used for calibrating turbidity. The calibrated chlorophyll-a time series and corrected turbidity time series were compared against Globcolour CHL1 and TSM products, respectively. Details on all quality control steps, the calibration, and the comparison with satellite data can be found in the data processing report. The data set user should keep in mind that some parts of the time series are likely affected by non-photochemical quenching, see data processing report. It was out of the scope of the quality control to flag or correct non-photochemical quenching. The resulting data set contains the original data and corresponding quality flags achieved by the quality control algorithm as well as the calibrated chlorophyll-a and corrected turbidity data with corresponding quality flags. The data source is given through the name of the active container. The data set contains data during transit time and station work. We recommend to use ship's speed to filter for only transit data.

Copernicus-Auswertung für die Ostsee (WMS)

Dieser Darstellungs-Dienst (WMS) der Marinen Dateninfrastruktur Deutschland (MDI-DE) stellt Copernicus-Daten für die Ostsee zur Verfügung. Die Daten wurden für den Zeitraum 2022-2024 aggregiert (gemittelt) sowie zeitvariant ausgewertet und können u.a. für das MSRL Reporting genutzt werden. Bereitgestellte Parameter sind: Cyanobakterien, Trübung, Salinität, Temperatur und Azidität. Die Daten werden über unterschiedliche Zeiträume (täglich, monatlich, saisonal, 2-wöchentlich, MSRL-abgestimmt Jul-Aug) aggregiert, repräsentiert durch statistische Kennziffern.

Copernicus-Daten für die Ostsee (2022-2025)

Die Marine Dateninfrastruktur Deutschland (MDI-DE) stellt Copernicus-Daten für die Ostsee zur Verfügung. Die Daten wurden für den Zeitraum 2022-2024 aggregiert (gemittelt) sowie zeitvariant ausgewertet und können u.a. für das MSRL Reporting genutzt werden. Bereitgestellte Parameter sind: Cyanobakterien, Trübung, Salinität, Temperatur und Azidität. Die Daten werden über unterschiedliche Zeiträume (täglich, monatlich, saisonal, 2-wöchentlich, MSRL-abgestimmt Jul-Aug) aggregiert, repräsentiert durch statistische Kennziffern.

Biogeochemical variables from a Multidisciplinary BASS Mesocosm Study at Wilhelmshaven, 2023

This dataset contains biogeochemical variables measured during the same mesocosm experiment at Sea Surface Facility (SURF) in Wilhelmshaven, Germany (53.5148° N, 8.1461° E) in 2023. Variables include surfactants and nutrient concentrations, chlorophyll a, pigments, particulate and dissolved organic carbon and nitrogen, and several other biogeochemical parameters. These data complement the daily averaged physical parameters (PANGAEA DOI: https://doi.pangaea.de/10.1594/PANGAEA.983975) and together support the assessment of ecosystem and biogeochemical dynamics associated with the experiment, as described in the related publication Bibi et al., 2025.

Continuous optical chlorophyll-a and turbidity data along R/V SONNE cruise SO285

Underway optical chlorophyll-a and turbidity data were collected along the cruise track with Sea-Bird Scientific ECO FLNTU sensors installed within two autonomous measurement systems, called self-cleaning monitoring boxes (SMBs). The SMBs measure alternatingly. While one box is measuring, the other one is being cleaned. The water inlet for the SMBs is at about 4 m below sea surface. Observed chlorophyll-a and turbidity data were both quality controlled and the chlorophyll-a data was additionally calibrated using chlorophyll-a reference data from discrete water samples taken from the CTD water sampler at 10 m depth. Sample chlorophyll-a was determined spectrophotometrically following Jeffrey and Humphrey (1975) as in EPA Method 446. Note that the ship crossed various biogeochemical provinces leading to high variability in the data and, additionally, non-photochemical quenching effects can be observed making it difficult to robustly calibrate the data. A comparison of the calibrated chlorophyll-a with satellite data using the GlobColour CHL1 and CHL2 products is additionally provided. Details on all quality control steps, the calibration, and the comparison with satellite data can be found in the data processing report. The resulting data set contains the original data, the calibrated data (in case of chlorophyll-a) and corresponding quality flags achieved by the quality control algorithm. The data source is given through the name of the active SMB. The data set contains data during transit time and station work. We recommend to use ship's speed to filter for only transit data.

Physical oceanography during RV MARIA S. MERIAN cruise MSM123

Physical oceanography data was acquired by a ship-based Seabird SBE911plus CTD-Rosette system onboard RV MARIA S. MERIAN during research cruise MSM123. The CTD system is comprised of a Seabird SBE911plus including dual respectively redundant sensor and pump packages. The SBE11plus Deck Unit remains on board in a laboratory and supplies on one hand power to the SBE9plus underwater unit, on the other hand data telemetry between the SBE9plus and a measurement PC. The SBE9plus underwater unit itself holds a pressure sensor and is interfacing with dual SEB3 temperature, SBE4 conductivity and SBE43 oxygen sensors, as well as two SBE5 pumps to provide a pumped water supply past each sensor. The system also carries an optical FLNTU sensor to measure a combination of back-scattering, turbidity, and chlorophyll-a. To quantify the photo-synthetically active radiation a PAR sensor is installed as well.

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