Methane (CH4) is a major greenhouse gas of which the atmospheric concentration has more than doubled since pre-industrial times. Soils can act as both, source and sink for atmospheric CH4, while upland forest soils generally act as CH4 consumers. Oxidation rates depend on factors influenced by the climate like soil temperature and soil moisture but also on soil properties like soil structure, texture and chemical properties. Many of these parameters directly influence soil aeration. CH4 oxidation in soils seems to be controlled by the supply with atmospheric CH4, and thus soil aeration is a key factor. We aim to investigate the importance of soil-gas transport-processes for CH4 oxidation in forest soils from the variability the intra-site level, down to small-scale (0.1 m), using new approaches of field measurements. Further we will investigate the temporal evolution of soil CH4 consumption and the influence of environmental factors during the season. Based on previous results, we hypothesize that turbulence-driven pressure-pumping modifies the transport of CH4 into the soil, and thus, also CH4 consumption. To improve the understanding of horizontal patterns of CH4 oxidation we want to integrate the vertical dimension on the different scales using an enhanced gradient flux method. To overcome the constraints of the classical gradient method we will apply gas-diffusivity measurements in-situ using tracer gases and Finite-Element-Modeling. Similar to the geophysical technique of Electrical Resistivity Tomography we want to develop a Gas Diffusivity Tomography. This will allow to derive the three-dimensional distribution of soil gas diffusivity and methane oxidation.
Residence times is a key signature to characterize flow and transport at all temporal and spatial scales in different hydrological compartments. It is assumed that the spatial organisation of the landscape controls space-time organisation of the water cycle and related processes and hence the residence time. Combining flux and residence concentration data of natural tracers in water, stable isotopes, and artificial tracers will allow us to predict residence time and flow pathways in the different hydrological compartments as well as integrative for entire watersheds. We will investigate with different methods the fingerprint of hydrological processes found in the signal of isotopic composition and natural and artificial tracers of soil, ground and stream water in space and time. The temporal variability of isotopes in soil water, groundwater and stream water will be combined to benchmark transport and flow models and to derive a new functional form of short to long-term transit time distributions. The spatial patterns of stable isotopes in the saturated and unsaturated zone will be used to derive long-term flow pathways, mixing patterns and the proportion of evaporation to transpiration. Artificial tracer experiments using salt and electric resistivities will vizualize and quantify internal flow pathways in particular preferential flow pathways.
Outbreaks of foodborne illness linked to consumptions of fresh, or partially processed, agricultural products are a growing concern in industrialized and developing countries. The incidence of human pathogens on fresh fruits and vegetables is often related to the use of recycled wastewaster in surface irrigation as well as high amounts of animal manure in agricultural management practice. Thereby the soil inhabiting fauna plays an important role in the transport and dissemination of microorganisms. The focus of the proposed project is on nematodes, well known vectors for bacteria and viruses in soil. The major goals are to: (1) survey human pathogens in soil and on/in free-living and plant parasitic nematodes in agriculture field sites irrigated with recycled wastewater or fertilized with fresh animal manure in Israel and the Palestinian Authority, (2) assess the function of nematodes as vectors in transmitting bacteria from microbial hot spots to plants, and (3) localize bacteria on and/or within the nematode and identify bacterial factors required for survival in the nematode host. Understanding the mechanisms involved in dissemination of human pathogens by nematodes will enhance the ability to develop practical means to minimize contamination of fresh produce and increase safety in food production.
Water is an intrinsic component of ecosystems acting as a key agent of lateral transport for particulate and dissolved nutrients, forcing energy transfers, triggering erosion, and driving biodiversity patterns. Given the drastic impact of land use and climate change on any of these components and the vulnerability of Ecuadorian ecosystems with regard to this global change, indicators are required that not merely describe the structural condition of ecosystems, but rather capture the functional relations and processes. This project aims at investigating a set of such functional indicators from the fields of hydrology and biogeochemistry. In particular we will investigate (1) flow regime and timing, (2) nutrient cycling and flux rates, and (3) sediment fluxes as likely indicators. For assessing flow regime and timing we will concentrate on studying stable water isotopes to estimate mean transit time distributions that are likely to be impacted by changes in rainfall patterns and land use. Hysteresis loops of nitrate concentrations and calculated flux rates will be used as functional indicators for nutrient fluxes, most likely to be altered by changes in temperature as well as by land use and management. Finally, sediment fluxes will be measured to indicate surface runoff contribution to total discharge, mainly influenced by intensity of rainfall as well as land use. Monitoring of (1) will be based on intensive sampling campaigns of stable water isotopes in stream water and precipitation, while for (2) and (3) we plan to install automatic, high temporal-resolution field analytical instruments. Based on the data obtained by this intensive, bust cost effective monitoring, we will develop the functional indicators. This also provides a solid database for process-based model development. Models that are able to simulate these indicators are needed to enable projections into the future and to investigate the resilience of Ecuadorian landscape to global change. For the intended model set up we will couple the Catchment Modeling Framework, the biogeochemical LandscapeDNDC model and semi-empirical models for aquatic diversity. Global change scenarios will then be analyzed to capture the likely reaction of functional indicators. Finally, we will contribute to the written guidelines for developing a comprehensive monitoring program for biodiversity and ecosystem functions. Right from the beginning we will cooperate with four SENESCYT companion projects and three local non-university partners to ensure that the developed monitoring program will be appreciated by locals and stakeholders. Monitoring and modelling will focus on all three research areas in the Páramo (Cajas National Park), the dry forest (Reserva Laipuna) and the tropical montane cloud forest (Reserva Biologica San Francisco).
Dissolved organic matter (DOM) is one major source of subsoil organic matter (OM). P5 aims at quantifying the impact of DOM input, transport, and transformation to the OC storage in the subsoil environment. The central hypotheses of this proposal are that in matric soil the increasing 14C age of organic carbon (OC) with soil depth is due to a cascade effect, thus, leading to old OC in young subsoil, whereas within preferential flowpaths sorptive stabilization is weak, and young and bioa-vailable DOM is translocated to the subsoil at high quantities. These hypotheses will be tested by a combination of DOC flux measurements with the comparative analysis of the composition and the turnover of DOM and mineral-associated OM. The work programme utilizes a DOM monitoring at the Grinderwald subsoil observatory, supplemented by defined experiments under field and labora-tory conditions, and laboratory DOM leaching experiments on soils of regional variability. A central aspect of the experiments is the link of a 13C-leaf litter labelling experiment to the 14C age of DOM and OM. With that P5 contributes to the grand goal of the research unit and addresses the general hypotheses that subsoil OM largely consists of displaced and old OM from overlying horizons, the sorption capacity of DOM and the pool size of mineral-associated OM are controlled by interaction with minerals, and that preferential flowpaths represent 'hot spots' of high substrate availability.
Boron (B) is an essential microelement for plants. Despite the use of modern fertilization methods, B deficiency still causes losses in agricultural plant production. Even though many positive effects of B on plant growth and physiology have been reported, a large majority of B functions and the regulatory mechanisms controlling the B nutritional status remain unknown. The main objective of this project is to elucidate how the greatly B deficiency-sensitive Brassica crop plants process and regulate their B status during vegetative and reproductive growth. In this context, the project aims at identifying the mode of action of B in mechanisms regulating the B status itself and uncovering those mechanisms contributing to B efficiency in different genotypes. Plant species subjected to investigation will be the agronomically important oilseed and vegetable plant Brassica napus (rapeseed) and its close relative the genetic and molecular model plant Arabidopsis thaliana. Questions addressed within the scope of this project should lead to a detailed understanding of mechanisms controlling B uptake and allocation from the level of the whole plant down to the cellular level. B transport routes and rates will be determined in sink- and source tissues and in developmental periods with a particularly high B demand. A special focus will be on the identification of B transport bottlenecks and the analysis of B deficiency-sensitive transport processes to and within the highly B-demanding reproductive organs. Recent studies in Arabidopsis suggest that Nodulin26-like Intrinsic Proteins (NIPs), which belong to the aquaporin channel protein family, are essential for plant B uptake and distribution. The systematic focus on the molecular and physiological characterization of B. napus NIPs will clarify their role in B transport and will identify novel NIP-associated mechanisms playing key roles in the B response network.To further resolve the mostly unknown impact of the B nutritional status on gene regulation and metabolism, a transcript and metabolite profile of B-sufficient and B-deficient rapeseed plants will be generated. Additionally, an Arabidopsis transcription factor knockout collection (greater 300 lines) will be screened for abnormalities in responses to the B nutritional status. This will identify yet unknown B-responsive genes (transcription factors and their targets) and gene products (enzymes or metabolite variations) playing key roles in signalling pathways and mechanisms regulating the B homeostasis. Boron (in form of boric acid) and arsenite (As) share in all likelihood the same NIP-mediated transport pathways. To assess the consequences of this dual transport pathway the so far unstudied impact of the plants B nutritional status on the accumulation and distribution of As will be investigated in B. napus. Moreover, the current dimension of the As contamination of Brassica-based food products, to which consumers are exposed to, will be analyzed. usw.
Rain-cracking limits the production of many soft and fleshy fruit including sweet cherries world wide. Cracking is thought to result from increased water uptake through surface and pedicel. Water uptake increases fruit volume, and hence, turgor of cells (Pcell) and the pressure inside the fruit (Pfruit) and subjects the skin to tangential stress and hence, strain. When the strain exceeds the limits of extensibility the fruit cracks. This hypothesis is referred to as the Pfruit driven strain cracking. Based on this hypothesis cracking is related to two independent groups of factors: (1) water transport characteristics and (2) the intrinsic cracking susceptibility of the fruit defined as the amount of cracking per unit water uptake. The intrinsic cracking susceptibility thus reflects the mechanical constitution of the fruit. Most studies focussed on water transport through the fruit surface (factors 1), but only little information is available on the mechanical constitution (i.e., Pfruit and Pcell, tensile properties such as fracture strain, fracture pressure and modulus of elasticity of the exocarp; factors 2). The few published estimates of Pfruit in sweet cherry are all obtained indirectly (calculated from fruit water potential and osmotic potentials of juice extracts) and unrealistically high. They exceed those measured by pressure probe techniques in mature grape berry by several orders of magnitude. The objective of the proposed project is to test the hypothesis of the Pfruit driven strain cracking. Initially we will focus on establishing systems of widely differing intrinsic cracking susceptibility by varying species (sweet and sour cherry, Ribes and Vaccinium berries, plum, tomato), genotype (within sweet cherry), stage of development and temperature. These systems will then be used for testing the hypothesis of Pfruit driven strain cracking. We will quantify Pfruit und Pcell by pressure probe techniques and compression tests and the mechanical properties of the exocarp using biaxial tensile tests. When the presence of high Pfruit and Pcell is confirmed by direct measurements, subsequent studies will focus on the mode of failure of the exocarp (fracture along vs. across cell walls) and the relationship between failure thresholds and morphometric characteristics of the exocarp. However, when Pfruit und Pcell are low, the hypothesis of Pfruit driven strain cracking must be rejected and the mechanistic basis for low pressures (presence of apoplastic solutes) clarified on a temporal (in the course of development) and a spatial scale (exocarp vs. mesocarp). We focus on sweet cherry, because detailed information on this species and experience in extending the short harvest period is available. Where appropriate, other cracking susceptible species (sour cherry, plum, Vaccinium, Ribes, tomato) will be included to further extend the experimental period and to maximize the range in intrinsic cracking susceptibility.
During the first project period we developed a general approach to quantify soil pore structure based on X-ray micro-tomography Vogel et al. (2010) which is applicable at various scales to cover soil pores larger that 0.05 mm in a representative way. Based on this method we generated equivalent network models to numerically simulate flow and transport of dissolved chemicals. The existing network model was extended to handle reactive transport and infiltration processes which are especially critical for matter flux in soil. The results were compared to experimental findings. The original research question 'what does a particle see on its way through soil' could be answered quantitatively for various boundary conditions including steady state flux and infiltration. However, we identified various critical aspects of the proposed modeling concept which will be in the focus of the second period. This includes 1) the spatial arrangement of interfaces having different quality which is crucial for chemical interactions and pore scale water dynamics, 2) the realistic multiphase dynamics at the pore scale which need to reflect the dynamic pressure and movement of trapped non-wetting phase and 3) the parametrization of structural complexity which need to be developed beyond the measurement of continuous Minkowski functions to allow the development of quantitative relations between structure and function. These aspects will be explored in a joint experiments in cooperation with partners within the SPP.
Peroxyradikale sind kurzlebige Spezies, die an den meisten Oxidationsprozessen in der Atmosphäre beteiligt sind, die zur Bildung von langlebigeren und chemisch oder toxikologisch wichtigen Schadstoffen wie Ozon führen. Insbesondere in Gebieten, die von komplexen Emissionsquellen betroffen sind, sind Peroxyradikal-Messmethoden mit ausreichender Genauigkeit, Reproduzierbarkeit und Empfindlichkeit erforderlich, um die chemische Umwandlung der städtischen Umweltverschmutzung zu verstehen. In dieser Hinsicht ermöglichen Vergleiche von state-of-the-art Sensoren in chemischen Reaktorkammern deren Charakterisierung unter kontrollierten Bedingungen und verbessern das Vertrauen in die Messung von Peroxyradikalen.SPRUCE strebt ein besseres Verständnis der Rolle der Peroxyradikale bei atmosphärischen chemischen Umwandlungen an, die aus der Wechselwirkung zwischen urbanen anthropogenen und ländlichen biogenen Emissionen resultieren. Im Rahmen der vorgeschlagenen Arbeit wird das vorhandene PeRCEAS-Instrument (Peroxy Radical Chemical Enhancement and Absorption Spectrometer) an der Messkampagne des internationalen Projekts ACROSS (Atmospheric ChemistRy Of the Suburban Forest) zur Untersuchung des Schadstoffausflusses von Paris über ein Waldgebiet, und in der internationalen Vergleichsstudie ROxCOMP22 für wissenschaftliche Instrumente, die atmosphärische Peroxyradikale teilnehmen. Diese beiden Messkampagnen befassen sich mit zwei Hauptaspekten von SPRUCE. Sie bieten eine einzigartige Gelegenheit für a) die Messung von Peroxyradikalen in der spezifischen Umgebung von Interesse und in Verbindung mit einer umfangreichen Reihe von Beobachtungen, die für die Interpretation der Radikalchemie von wesentlicher Bedeutung sind, und b) die Bewertung der Datenqualität und Leistungsfähigkeit von PeRCEAS, insbesondere die Überprüfung der Sensitivität und Effizienz für die Speziation der Radikale unter kontrollierten Bedingungen.Ein Schwerpunkt der Studie wird auf der Untersuchung von Oxidationsreaktionen und Ozonausbeuten in Luftmassen mit unterschiedlicher anthropogener/biogener Signatur in Abhängigkeit von der Menge und Zusammensetzung von Peroxyradikalen liegen. Numerische Berechnungen und Modelle werden durch die Beobachtungen von Vorläuferspezies eingeschränkt, um die Budgets von Peroxyradikalen abzuschätzen. Der Vergleich mit den PeRCEAS-Messungen wird verwendet, um das Verständnis der Oxidationsmechanismen in urbanen Plumes gemischt mit biogenen Emissionen zu testen. Es wird erwartet, dass die Analyse des resultierenden Datensatzes das aktuelle Wissen über die chemische Transformation von Megacity-Emissionen während des atmosphärischen Transports ergänzt.
Aktuelle wissenschaftliche Studien legen nahe, dass die aktuelle Erderwärmung durch Treibhausgasemissionen hervorgerufen wird, die vom Menschen verursacht sind. Um gegen diese Entwicklung geeignete Maßnahmen ergreifen zu können bzw. um zu überprüfen, ob solche Maßnahmen von Erfolg gekrönt sind, ist es notwendig, die Schadstoffkonzentrationen inklusive der zugehörigen Emissionsquellen genau zu kennen. Diese Informationen sind bisher jedoch sehr lückenhaft und beruhen auf sogenannten 'bottom-up' Berechnungen. Da diese Kalkulationen nicht auf direkten Messungen beruhen, weisen sie große Ungenauigkeiten auf und sind außerdem nicht in der Lage, bisher unbekannte Emissionsquellen zu identifizieren. In dem hier vorgestellten Projekt soll ein mesoskaliges Netzwerk für die Überwachung von Luftschadstoffen wie CO2, CH4, CO, NO2 und O3 aufgebaut werden, das auf dem neuartigen Konzept der differentiellen Säulenmessung beruht. Bei diesem Ansatz wird die Differenz zwischen den Luftsäulen luv- und leewärts einer Stadt gebildet. Diese Differenz ist proportional zu den emittierten Schadstoffen und somit eine Maßzahl für die Emissionen, welche in der Stadt generiert werden.Mithilfe dieser Methode wird es in Zukunft möglich sein, städtische Emissionen über lange Zeiträume hinweg zu überwachen. Damit können neue Informationen über die Generierung und Umverteilung von Luftschadstoffen gewonnen werden. Wir werden u.a. folgende zentrale Fragen beantworten: Wie verhält sich der tatsächliche Trend der CO2, CH4 und NO2 Emissionen in München über mehrere Jahre? Wo sind die Emissions-Hotspots? Wie akkurat sind die bisherigen 'bottom-up' Abschätzungen? Wie effektiv sind die Maßnahmen zur Emissionsreduzierung tatsächlich? Sind vor allem für Methan weitere Maßnahmen zur Reduzierung der Emissionen notwendig? Zu diesem Zweck werden wir ein vollautomatisiertes Messnetzwerk aufbauen und passende Methoden zur Modellierung entwickeln, welche u.a. auf STILT (Stochastic Time-Inverted Lagrangian Transport) und CFD (Computational Fluid Dynamics) basieren. Mithilfe der Modellierungsresultate werden wir eine Strategie entwerfen, wie städtische Netzwerke zur Überwachung von Luftschadstoffen aufgebaut werden müssen, um repräsentative Ergebnisse zu erhalten. Außerdem können mit den so gewonnenen städtischen Emissionszahlen z.B. dem Stadtreferat, den Stadtwerken München oder der Bayerischen Staatsregierung Möglichkeiten zur Beurteilung der Effektivität der angewandten Klimaschutzmaßnahmen an die Hand gegeben werden. Das hier vorgestellte Messnetzwerk dient somit als Prototyp, um die grundlegenden Fragen zum Aufbau eines solchen Sensornetzwerks zu klären, damit objektive Aussagen zu städtischen Emissionen möglich werden. Dieses Projekt ist weltweit einmalig und wird zukunftsweisende Ergebnisse liefern.
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