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Terrestrial, UAV-borne, and airborne laser scanning point clouds of central European forest plots, Germany, with extracted individual trees and manual forest inventory measurements

Laser scanning point clouds of forest stands were acquired in southwest Germany in 2019 and 2020 from different platforms: an aircraft, an uncrewed aerial vehicle (UAV) and a ground-based tripod. The UAV-borne and airborne laser scanning campaigns cover twelve forest plots of approximately 1 ha. The plots are located in mixed central European forests close to Bretten and Karlsruhe, in the federal state of Baden-Württemberg, Germany. Terrestrial laser scanning was performed in selected locations within the twelve forest plots. Airborne and terrestrial laser scanning point clouds were acquired under leaf-on conditions, UAV-borne laser scans were acquired both under leaf-on and later under leaf-off conditions. In addition to the laser scanning campaigns, forest inventory tree properties (species, height, diameter at breast height, crown base height, crown diameter) were measured in-situ during summer 2019 in six of the twelve 1-ha plots. Single tree point clouds were extracted from the different laser scanning datasets and matched to the field measurements. For each tree entry, point clouds, tree species, position, and field-measured and point cloud-derived tree metrics are provided. For 249 trees, point clouds from all three platforms are available. The tree models form the basis of a single tree database covering a range of species typical for central European forests which is currently being established in the framework of the SYSSIFOSS project.

Photos of marine litter in the shallow seafloor of the southernmost North and Baltic seas during the Walther Herwig III cruise WH462 in 2022

The dataset is a set of photos of marine litter at the seafloor and corresponding coordinates. The photos were taken in the southernmost North and Baltic seas, between 30.11.2022 and 12.12.2022 during the Walther Herwig III 462 research cruise (Date begin: 29.11.2022 - Date end: 14.12.2022, harbor begin: Bremerhaven - harbor end: Bremerhaven) . The video system used consists of a GoPro HERO 9 black in an aluminium case mounted in the front of the sledge and two lights with a total of 7200 lumen. Three laser pointers mounted in an equilateral triangle (laser center point distance 25.5 cm) provided the size reference for the video observation. The photos were taken as part of a study to visually quantify the amount of marine letter in the seafloor and compare this value with bottom trawl data.

Sonderforschungsbereich (SFB) 1537: Skalenübergreifende Quantifizierung von Ökosystemprozessen in ihrer räumlich-zeitlichen Dynamik mittels smarter autonomer Sensornetzwerke, Teilprojekt A04: Prozessbasierte Analyse von Ökosystem-Atmosphäre-Austauschs von CO2, H2O und flüchtigen organischen Verbindungen (VOC)

A4.1 Ökosystemreaktionen und Rückkopplungen im Ökosystem-Atmosphäre-Austausch von CO2, H2O und VOCs in einem heterogenen Waldökosystem Um die Lücke zwischen der relativ kleinen Skala eines einzelnen Baumes und einem Waldbestand zu schließen, analysiert A4.1 den Austausch zwischen Ökosystem und Atmosphäre durch Eddy-Kovarianz Messungen von H2O, CO2 und dessen Isoflux (13CO2). Somit lassen sich die Flüsse auf einer integrierten Skala in ihre Komponenten (Ökosystematmung und Bruttoprimärproduktion) auftrennen. Darüber hinaus messen wir die Aufnahme und Freisetzung von VOC durch unsere Wälder und bringen sie mit wichtigen Ökosystemfunktionen in Verbindung, die stark auf Umweltveränderungen reagieren. A4.2 Entwicklung eines auf einem Interbandkaskadenlaser basierenden Messsystems zur Untersuchung des Austauschs zwischen Ökosystem und Atmosphäre von VOCs. Hier entwickeln wir erstmals eine optische spektroskopische Sensortechnologie, um VOCs mit Hilfe der durchstimmbaren Laserabsorptionsspektroskopie (TLAS) zu messen. Dies soll entlang der Konzentrationsgradienten am Messturm und in Verbindung mit Einzelblattküvetten (A3.2) erfolgen.

Mechanische und mikrostrukturelle Stabilität von additiven Zn-Bauteilen für technische und biomedizinische Anwendungen

Seabed Images at pilot oyster reefs in the Borkum Reef Ground marine protected area taken in May 2024

Video transects were done using the A.IKANBILISTM hovering autonomous underwater vehicle (HAUV) of the company BeeX (https://beex.sg/a-ikanbilis/), which flew over the reefs along predefined transects at a depth of 0.5m above seabed and at a speed of 1 m s-1. From the dive videos of the HAUV, SBIs were extracted every second. Each SBI features two parallel laser lines 30 cm away from each other. The camera used was a GoPro, the videos and pictures were taken perpendicularly to the seabed. The seabed images provide insights into the general composition of key species, higher systematic groups and ecological guilds. The images contain information on how benthic species are associated to each other. Transect files include individual images, whereas metadata of each image includes diving depth, date/time of transect. Geographical coordinates and time of individual images is unavailable, images have a resolution of 300dpi and a size of 9 to 13 MB.

Seabed Images at pilot oyster reefs in the Borkum Reef Ground marine protected area taken in July 2025

Video transects were done using the A.IKANBILISTM hovering autonomous underwater vehicle (HAUV) of the company BeeX (https://beex.sg/a-ikanbilis/), which flew over the reefs along predefined transects at a depth of 0.5m above seabed and at a speed of 1 m s-1. From the dive videos of the HAUV, SBIs were extracted every 5 seconds. SBIs, each SBI features two parallel laser lines 25 cm away from each other. The camera used was a GoPro, the videos and pictures were taken perpendicularly to the seabed. The seabed images provide insights into the general composition of key species, higher systematic groups and ecological guilds. The images contain information on how benthic species are associated to each other. Transect files include individual images, whereas metadata of each image includes diving depth, date/time of transect. Geographical coordinates of some individual images is unavailable, images have a resolution of 300dpi and a size of 7 to 13 MB.

KI-Ableitung der Straßenbreiten in Freiburg i. Br.

Dieser Datensatz enthält die Straßenbreiten im Freiburger Stadtgebiet, von Bordsteinunterkante zu Bordsteinunterkante, dargestellt als Breitenlinien. Die Straßenbreiten wurden aus den 3D-Punktwolken der Befahrung des Frühjahr 2024 automatisiert abgeleitet, indem die Unterkante der Bordsteine auf beiden Straßenseite identifiziert und lokalisiert wurden. An den Stellen, an denen auf einer oder beiden Seiten der Bordstein nicht identifiziert werden konnte, erfolgte keine Breitebestimmung. Die automatisierte Ableitung wurde nicht manuell nachgearbeitet. Bei groben Verschmutzungen am Fahrbahnrand, Bordsteinabsenkungen, ggf. parkenden Autos und verschiedenem "Straßenmobiliar" (z.B. Poller) kann es daher sein, dass ein "falscher Bordstein" identifiziert wurde und es daher zu einer fehlerhaften Breitebestimmung kam. Wir empfehlen daher die gleichzeitige Einblendung von Luftbildern um eine schnelle Einordnung der Bestimmung vorzunehmen.

Photosynthetic efficiency and symbiont cover of Amphistegina lobifera measured by PAM fluorometry and CLSM during a menthol-DCMU bleaching experiment (Nov–Dec 2022, Bremen, Germany)

This dataset contains experimental data from a one-month aquarium-based bleaching experiment conducted on Large Benthic Foraminifera (Amphistegina lobifera) from 16 November to 16 December 2022 at the Marine Experimental Facility of the Leibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany. The aim of the experiment was to obtain symbiont-free A. lobifera individuals for future re-inoculation studies and symbiont switching experiments. The foraminifera were originally collected in May 2022 at the Interuniversity Institute for Marine Sciences (IUI) in Eilat, Israel (29°30'07.8N, 34°55'04.9E) and maintained in culture in Germany until the start of the experiment. To assess the effectiveness of two chemical agents—menthol and 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU)—in disrupting symbiosis, photosynthetic efficiency (measured as maximum quantum yield, Fv/Fm) was recorded every other day during the first week of the experiment using a Pulse-Amplitude-Modulated (PAM) fluorometer. Fv/Fm measurements were discontinued after the first week due to complete inhibition of photosynthesis. Symbiont coverage (%) was assessed on day one and then weekly until week four using Confocal Laser Scanning Microscopy (CLSM).

High-resolution measurements of essential climate variables in the North Sea from the autonomous surface vehicle HALOBATES during a research cruise with RV Senckenberg (September 2022)

During the RV Senckenberg cruise in the German Bight near Helgoland, the autonomous research catamaran HALOBATES collected data on Essential Climate Variables (ECV), including sea surface temperature (SST) and salinity (SSS) and meteorological variables. The catamaran recorded SST and SSS at seven depths. Measurements covered the near-surface layer (NSL) from 30 to 100 cm with a high vertical resolution of approximately 10 cm and the first millimeter of the ocean, the sea-surface microlayer (SML), also known as the ocean's skin layer. Conductivity, temperature, and depth (CTD) sensors measured temperature and conductivity via a flow-through system on HALOBATES. Additional temperature sensors were mounted below the catamaran to measure the water temperature in situ at six depths in the NSL. Salinity was corrected with reference data from discrete samples, and biases between the sensors were removed for salinity and temperature, respectively. Two weather stations on the catamaran recorded relevant meteorological variables such as wind speed, wind direction, air temperature, humidity, and solar radiation. Additional meteorological sensors (optical laser disdrometer and two pyrgeometers) were mounted on RV Senckenberg, monitoring precipitation and incoming and outgoing longwave irradiance. The dataset consists of two HALOBATES operations conducted on 21 and 22 September 2022.

Geochemical parameters in peat depth profiles from ombrotrophic bogs in North and Central Europe. Pichlmaier Moor, Austria

This dataset contains geochemical variables measured in six depth profiles from ombrotrophic peatlands in North and Central Europe. Peat cores were taken during the spring and summer of 2022 from Amtsvenn (AV1), Germany; Drebbersches Moor (DM1), Germany; Fochteloër Veen (FV1), the Netherlands; Bagno Kusowo (KR1), Poland; Pichlmaier Moor (PI1), Austria and Pürgschachen Moor (PM1), Austria. The cores AV1, DM1 and KR1 were taken using a Wardenaar sampler (Royal Eijkelkamp, Giesbeek, the Netherlands) and had diameter of 10 cm. The cores FV1, PM1 and PI1 had an 8 cm diameter and were obtained using an Instorf sampler (Royal Eijkelkamp, Giesbeek, the Netherlands). The cores FV1, DM1 and KR1 were 100 cm, core AV1 was 95 cm, core PI1 was 85 cm and core PM1 was 200 cm. The cores were subsampeled in 1 cm (AV1, DM1, KR1, FV1) and 2 cm (PI1, PM1) sections. The subsamples were milled after freeze drying in a ballmill using tungen carbide accesoires. X-Ray Fluorescence (WD-XRF; ZSX Primus II, Rigaku, Tokyo, Japan) was used to determine Al (μg g-1), As (μg g-1), Ba (μg g-1), Br (μg g-1), Ca (g g-1), Cl (μg g-1), Cr (μg g-1), Cu (μg g-1), Fe (g g-1), K (g g-1), Mg (μg g-1), Mn (μg g-1), Na (μg g-1), P (μg g-1), Pb (μg g-1), Rb (μg g-1), S (μg g-1), Si (μg g-1), Sr (μg g-1), Ti (μg g-1) and Zn (μg g-1). These data were processed and calibrated using the iloekxrf package (Teickner & Knorr, 2024) in R. C, N and their stable isotopes were determined using an elemental analyser linked to an isotope ratio mass spectrometer (EA-3000, Eurovector, Pavia, Italy & Nu Horizon, Nu Instruments, Wrexham, UK). C and N were given in units g g-1 and stable isotopes were given as δ13C and δ15N for stable isotopes of C and N, respectively. Raw data C, N and stable isotope data were calibrated with certified standard and blank effects were corrected with the ilokeirms package (Teickner & Knorr, 2024). Using Fourier Transform Mid-Infrared Spectroscopy (FT-MIR) (Agilent Cary 670 FTIR spectromter, Agilent Technologies, Santa Clara, Ca, USA) humification indices (HI) were determined. Spectra were recorded from 600 cm-1 to 4000 cm-1 with a resolution of 2 cm-1 and baselines corrected with the ir package (Teickner, 2025) to estimate relative peack heights. The HI (no unit) for each sample was calculated by taking the ratio of intensities at 1630 cm-1 to the intensities at 1090 cm-1. Bulk densities (g cm-3) were estimated from FT-MIR data (Teickner et al., in preparation).

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