In soils and sediments there is a strong coupling between local biogeochemical processes and the distribution of water, electron acceptors, acids, nutrients and pollutants. Both sides are closely related and affect each other from small scale to larger scale. Soil structures such as aggregates, roots, layers, macropores and wettability differences occurring in natural soils enhance the patchiness of these distributions. At the same time the spatial distribution and temporal dynamics of these important parameters is difficult to access. By applying non-destructive measurements it is possible to overcome these limitations. Our non-invasive fluorescence imaging technique can directly quantity distribution and changes of oxygen and pH. Similarly, the water content distribution can be visualized in situ also by optical imaging, but more precisely by neutron radiography. By applying a combined approach we will clarify the formation and architecture of interfaces induces by oxygen consumption, pH changes and water distribution. We will map and model the effects of microbial and plant root respiration for restricted oxygen supply due to locally high water saturation, in natural as well as artificial soils. Further aspects will be biologically induced pH changes, influence on fate of chemicals, and oxygen delivery from trapped gas phase.
The formation of biogeochemical interfaces in soils is controlled, among other factors, by the type of particle surfaces present and the assemblage of organic matter and mineral particles. Therefore, the formation and maturation of interfaces is studied with artificial soils which are produced in long-term biogeochemical laboratory incubation experiments (3, 6, 12, 18 months. Clay minerals, iron oxides and charcoal are used as major model components controlling the formation of interfaces because they exhibit high surface area and microporosity. Soil interface characteristics have been analyzed by several groups involved in the priority program for formation of organo-mineral interfaces, sorptive and thermal interface properties, microbial community structure and function. Already after 6 months of incubation, the artificial soils exhibited different properties in relation to their composition. A unique dataset evolves on the development and the dynamics of interfaces in soil in the different projects contributing to this experiment. An integrated analysis based on a conceptual model and multivariate statistics will help to understand overall processes leading to the biogeochemical properties of interfaces in soil, that are the basis for their functions in ecosystems. Therefore, we propose to establish an integrative project for the evaluation of data obtained and for publication of synergistic work, which will bring the results to a higher level of understanding.
Mit den Daten zur Umwelt stellt das UBA ein großes Angebot an aktuellen Daten zum Zustand der Umwelt bereit. Ein neues System – der UBA Data Cube – verbessert die Nutzbarkeit dieser Daten. Die Schnittstelle (API) dient zum programmatischen Abruf der Daten aus dem Data Cube des Umweltbundesamtes.
Labor- und Feldstudien zeigen, dass die Oberflächengrenzschicht des Ozeans (â€Ìsurface microlayerâ€Ì, kurz SML) die biogeochemischen Kreisläufe von klimaaktiven und atmosphärisch wichtigen Spurengasen wie Kohlenstoffdioxid (CO2), Kohlenstoffmonoxid (CO), Methan (CH4), Lachgas (N2O) und Dimethylsulfid (DMS) stark beeinflusst: (i) Jüngste Studien aus den PASSME- und SOPRAN-Projekten haben hervorgehoben, dass Anreicherungen von oberflächenaktiven Substanzen (d.h. Tensiden) einen starken (dämpfenden) Effekt sowohl auf die CO2- als auch auf die N2O-Flüsse über die SML/Atmosphären-Grenzfläche hinweg haben und (ii) Spurengase können durch (mikro)biologische oder (photo)chemische Prozesse in der SML produziert und verbraucht werden. Daher kann der oberste Teil des Ozeans, einschließlich der SML, verglichen mit dem Wasser, das in der Mischungsschicht unterhalb der SML zu finden ist, eine bedeutende Quelle oder Senke für diese Gase sein, was von sehr großer Relevanz für die Forschungseinheit BASS ist. Die Konzentrationen von CO2, N2O und anderen gelösten Gasen in der SML (oder den oberen Zentimetern des Ozeans) unterscheiden sich nachweislich von ihren Konzentrationen unterhalb der SML. Typischerweise werden die Nettoquellen und -senken wichtiger atmosphärischer Spurengase mit Konzentrationen berechnet, die in der Mischungsschicht gemessen wurden und mit Gasaustauschgeschwindigkeiten, die die SML nicht berücksichtigen. Diese Diskrepanzen führen zu falsch berechneten Austauschflüssen, die in der Folge zu großen Unsicherheiten in den Berechnungen der Klima-Antrieben und der Luftqualität in Erdsystemmodellen führen können. Durch die Verknüpfung unserer Spurengasmessungen mit Messungen von (i) der Dynamik und den molekularen Eigenschaften der organischen Materie und speziell des organischen Kohlenstoffs (SP1.1; SP1.5), (ii) der biologischen Diversität und der Stoffwechselaktivität (SP1.2), (iii) den optischen Eigenschaften der organischen Materie (SP1.3), (iv) der photochemischen Umwandlung der organischen Materie (SP1.4) und (v) den physikalischen Transportprozessen (SP2.3) werden wir ein umfassendes Verständnis darüber erlangen, wie die SML die Variabilität der Spurengasflüsse beeinflusst.
Unsere Motivation ist es, die Rolle von gelöstem organischem Material (DOM) in marinen Oberflächenfilmen (SML) als eine Schlüsselkomponente zu verstehen, die den Gasaustausch zwischen Atmosphäre und Meer, die Karbonatchemie, sowie die Ökophysiologie der assoziierten Organismen beeinflusst (Engel et al., 2017). Während unserer Vorarbeiten haben wir Hinweise auf einen bisher unbekannten Zusammenhang zwischen DOM und Karbonatchemie in der SML gefunden, sowie auf eine hohe räumlich-zeitliche Dynamik in der DOM-Zusammensetzung. Obwohl die hohe Heterogenität des SML-DOM-Geometabolom (d.h. die Gesamtheit des DOM-Pools, der durch biotische und abiotische Prozesse produziert und modifiziert wird) bekannt ist, gibt es wenige detaillierte Studien darüber. Insgesamt gibt es noch kein mechanistisches Verständnis darüber, unter welchen Bedingungen DOM in der SML in verschiedene chemische Fraktionen aufgeteilt wird. Dies liegt an der derzeit geringen Verfügbarkeit von Daten von einer größeren Anzahl von Untersuchungsstandorten unter unterschiedlichen Umwelt- und Versuchsbedingungen, sowie an einen Mangel an interdisziplinären Studien, die Physik, Geochemie und Biologie kombinieren. Mit anderen Worten, uns fehlen grundlegende (organo-)geochemische Informationen von der größten Luft-Wasser-Grenzfläche der Erde, mit unbekannten Konsequenzen für den damit verbundenen Austausch von klimarelevanten Gasen. In diesem Projekt streben wir an, diese Lücke durch sich ergänzende Messungen der DOM-Zusammensetzung und anorganischer Kohlenstoff-Systemparameter zu schließen. Die Relevanz für die Forschungseinheit BASS ergibt sich aus dem Ziel unseres Teilprojekts, die fehlenden grundlegenden biogeochemischen Informationen des SML-DOM-Inventars zur Verfügung zu stellen und sie in den Kontext der Ökosystemprozesse in der SML zu setzen, einschließlich der DOM-Produktion (SP1.1) sowie des mikrobiellen (SP1.2) und photochemischen (SP1.4) Umsatzes. Darüber hinaus werden wir den Beitrag des DOM-Geometaboloms zum Säure-Basen-Gleichgewicht der SML untersuchen, von dem wir erwarten, dass es die Gasgleichgewichte in der Grenzfläche - insbesondere im Kohlensäuresystem und damit auch die Treibhausgasflüsse - beeinflusst (SP2.1).
Soil organic matter (SOM) controls large part of the processes occurring at biogeochemical interfaces in soil and may contribute to sequestration of organic chemicals. Our central hypothesis is that sequestration of organic chemicals is driven by physicochemical SOM matrix aging. The underlying processes are the formation and disruption of intermolecular bridges of water molecules (WAMB) and of multivalent cations (CAB) between individual SOM segments or between SOM and minerals in close interaction with hydration and dehydration mechanisms. Understanding the role of these mediated interactions will shed new light on the processes controlling functioning and dynamics of biogeochemical interfaces (BGI). We will assess mobility of SOM structural elements and sorbed organic chemicals via advanced solid state NMR techniques and desorption kinetics and combine these with 1H-NMR-Relaxometry and advanced methods of thermal analysis including DSC, TGADSC- MS and AFM-nanothermal analysis. Via controlled heating/cooling cycles, moistening/drying cycles and targeted modification of SOM, reconstruction of our model hypotheses by computational chemistry (collaboration Gerzabek) and participation at two larger joint experiments within the SPP, we will establish the relation between SOM sequestration potential, SOM structural characteristics, hydration-dehydration mechanisms, biological activity and biogechemical functioning. This will link processes operative on the molecular scale to phenomena on higher scales.
This subproject aims at the development of spectral electrical impedance tomography (EIT) as a non-destructive tool for the imaging, characterization and monitoring of root structure and function in the subsoil at the field scale. The approach takes advantage of the capacitive properties of the soil-root interface associated with induced electrical polarization processes at the root membrane. These give rise to a characteristic electrical signature (impedance spectrum), which is measurable in an imaging framework using EIT. In the first project phase, the methodology is developed by means of controlled rhizotron experiments in the laboratory. The goal is to establish quantitative relationships between characteristics of the measured impedance spectra and parameters describing root system morphology, root growth and activity in dependence on root type, soil type and structure (with/without biopores), as well as ambient conditions. Parallel to this work, sophisticated EIT inversion algorithms, which take the natural characteristics of root system architecture into account when solving the inherent inverse problem, will be developed and tested in numerical experiments. Thus the project will provide an understanding of electrical impedance spectra in terms of root structure and function, as well as specifically adapted EIT inversion algorithms for the imaging and monitoring of root dynamics. The method will be applied at the field scale (central field trial in Klein-Altendorf), where non-destructive tools for the imaging and monitoring of subsoil root dynamics are strongly desired, but at present still lacking.
Existing models of soil organic matter (SOM) formation consider plant material as the main source of SOM. Recent results from nuclear magnetic resonance analyses of SOM and from own incubation studies, however, show that microbial residues also contribute to a large extent to SOM formation. Scanning electron microscopy showed that the soil mineral sur-faces are covered by numerous small patchy fragments (100 - 500 nm) deriving from microbial cell wall residues. We will study the formation and fate of these patchy fragments as continuously produced interfaces in artificial soil systems (quartz, montmorillonite, iron oxides, bacteria and carbon sources). We will quantify the relative contributions of different types of soil organisms to patchy fragment formation and elucidate the effect of redox con-ditions and iron mineralogy on the formation and turnover of patchy fragments. The develop-ment of patchy fragments during pedogenesis will be followed by studying soil samples from a chronosequence in the forefield of the retreating Damma glacier. We will characterize chemical and physical properties of the patchy fragments by nanothermal analysis and microscale condensation experiments in an environmental scanning electron microscope. The results will help understanding the processes at and characteristics of biogeochemical interfaces.
Biogeochemical interfaces shape microbial community function in soil. On the other hand microbial communities influence the properties of biogeochemical interfaces. Despite the importance of this interplay, basic understanding of the role of biogeochemical interfaces for microbial performance is still missing. We postulate that biogeochemical interfaces in soil are important for the formation of functional consortia of microorganisms, which are able to shape their own microenvironment and therefore influence the properties of interfaces in soil. Furthermore biogeochemical interfaces act as genetic memory of soils, as they can store DNA from dead microbes and protect it from degradation. We propose that for the formation of functional biogeochemical interfaces microbial dispersal (e.g. along fungal networks) in response to quality and quantity of bioavailable carbon and/or water availability plays a major role, as the development of functional guilds of microbes requires energy and depends on the redox state of the habitat.To address these questions, hexadecane degradation will be studied in differently developed artificial and natural soils. To answer the question on the role of carbon quantity and quality, experiments will be performed with and without litter material at different water contents of the soil. Experiments will be performed with intact soil columns as well as soil samples where the developed interface structure has been artificially destroyed. Molecular analysis of hexadecane degrading microbial communties will be done in vitro as well as in situ. The corresponding toolbox has been successfully developed in the first phase of the priority program including methods for genome, transcriptome and proteome analysis.
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