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Found 548 results.

Molecular determinants of host specificity of maize-, rice- and mango-pathogenic species of the genus Fusarium

Fusarium species of the Gibberella fujikuroi species complex cause serious diseases on different crops such as rice, wheat and maize. An important group of plant pathogens is the Gibberella fujikuroi species complex (GFC) of closely related Fusarium species which are associated with specific hosts; F. verticillioides and F. proliferatum are particularly associated with maize where they can cause serious ear-, root-, and stalk rot diseases. Two other closely related species of the GFC, F. mangiferae and F. fujikuroi, which share about 90Prozent sequence identity with F. verticillioides, are pathogens on mango and rice, respectively. All of these species produce a broad spectrum of secondary metabolites such as phytohormones (gibberellins, auxins, and cytokinins), and harmful mycotoxins, such as fumonisin, fusarin C, or fusaric acid in large quantities. However, the spectrum of those mycotoxins might differ between closely related species suggesting that secondary metabolites might be determinants for host specificity. In this project, we will study the potential impact of secondary metabolites (i.e. phytohormones and certain mycotoxins) and some other species-specific factors (e.g. species-specific transcription factors) on host specificity. The recently sequenced genomes of F. mangiferae and F. fujikuroi by our groups and the planned sequencing of F. proliferatum will help to identify such determinants by genetic manipulation of the appropriate metabolic pathway(s).

The iron-snow regime in Fe-FeS cores: a numerical and experimental approach

In the Earth, the dynamo action is strongly linked to core freezing. There is a solid inner core, the growth of which provides a buoyancy flux that drives the dynamo. The buoyancy in this case derives from a difference in composition between the solid inner core and the fluid outer core. In planetary bodies smaller than the Earth, however, this core differentiation process may differ - Fe may precipitate at the core-mantle boundary (CMB) rather than in the center and may fall as iron snow and initially remelt with greater depth. A chemical stable sedimentation zone develops that comprises with time the entire core - at that time a solid inner core starts to grow. The dynamics of this system is not well understood and also whether it can generate a magnetic field or not. The Jovian moon Ganymede, which shows a present-day magnetic dipole field, is a candidate for which such a scenario has been suggested. We plan to study this Fe-snow regime with both a numerical and experimental approach. In the numerical study, we use a 2D/3D thermo-chemical convection model that considers crystallization and sinking of iron crystals together with the dynamics of the liquid core phase (for the 3D case the influence of the rotation of the Fe snow process is further studied).The numerical calculations will be complemented by two series of experiments: (1) investigations in metal alloys by means of X-ray radioscopy, and (2) measurements in transparent analogues by optical techniques. The experiments will examine typical features of the iron snow regime. On the one hand they will serve as a tool to validate the numerical approach and on the other hand they will yield important insight into sub-processes of the iron snow regime, which cannot be accessed within the numerical approach due to their complexity.

Schwerpunktprogramm (SPP) 1158: Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; Bereich Infrastruktur - Antarktisforschung mit vergleichenden Untersuchungen in arktischen Eisgebieten, Polare Fische und der globale Wandel: Wie beeinflussen multiple Umweltressoren den Stoffwechsel arktischer & antarktischer Fische?

Ozeanerwärmung, -versauerung und die Umweltverschmutzung, nehmen zunehmend Einfluss auf die arktische und antarktische Umwelt. Antarktische, stenothermen Fische haben sich evolutionär an die dortigen stabilen Umweltbedingungen angepasst, welche z.B. genetische und funktionellen Veränderungen beinhalten. Diese könnten u.a. die Anpassungsmöglichkeiten antarktischer Fische gegenüber Umweltveränderungen beeinträchtigen. Vergleichsweise dazu leben arktische, gadoide Fische in einem Gebiet mir größeren Umweltschwankungen. In Anbetracht desen wird sich die Klimaveränderung wahrscheinlich unterschiedlich auf Arktische und Antarktische Fische auswirken.Das Herz-Kreislaufsystems stenothermer Fischarten ist prinzipiell nur geringfügig auf Umweltveränderungen zu reagieren. Hierbei stellt die Herzfunktion einen Schlüsselfaktor dar. Studien deuten des Weiteren auf negative und interagierende Einflüsse von Ozeanerwärmung- und versauerung auf Embryos und Larvalen polarer Fischarten hin. Die Exposition der Fische gegenüber mehreren, kombinierten Umweltstressoren kann zudem zu Verschiebungen im Energiehaushalt führen. Diese können eine verringerte Energieverfügbarkeit für andere, lebensnotwendige Funktionen zur Folge haben.Der Antrag befasst sich mit der Frage, wie sich die Umweltstressoren anthropogene Umweltverschmutzung, Klimaerwärmung und Ozeanversauerung auf den Energiestoffwechsel verschiedener Lebensstadien arktischer und antarktischer Fische auswirkt. Die Kernfragen lauten:Beeinträchtigt das Zusammenspiel multipler Stressoren den Schadstoffstoffwechsel polarer Fische? Verursachen multiple Stressoren eine Verschiebung im Energiehaushalt arktischer und antarktischer Fische? Wie beeinflussen Schadstoffe die aerobe und Herzfunktion der verschiedenen Entwicklungsstadien polarer Fische?Was für negative Folgen könnten aus ökologischer Sicht für arktische Gadoiden und antarktische Notothenioiden draus resultieren?Der Antrag soll ein grundsätzliches Verständnis für molekulare, mitochondriale, zellulare und Stoffwechselprozesse schaffen, welche der Anfälligkeit polarer Fische gegenüber Umweltstressoren zugrundeliegen. Als Maß für evolutionäre Anpassungsfähigkeit sollen die Akklimationskapazitäten der verschiedenen Lebensstadien polarer Fische untersucht werden.Für einen Breitengraden-Vergleich von Toleranzen gegenüber Umweltfaktoren konzentriert sich der Antrag auf ökologisch und biologisch vergleichbare stenotherme Arten. Somit wird eine Datengrundlage geschaffen, um die evolutionär verschiedenen aber gleichermaßen stenothermen arktische und antarktische Fische vergleichen zu können.Die in diesem Antrag eruierte physiologische Empflindlichkeit polarer Fische gegenüber Klimawandel sollen abschließend dazu dienen, die zukünftigen Risiken menschengemachter Umweltrisiken für diese Tiere abgeschätzen zu können. Schließlich wird das Projekt eine Grundlage für Management- und Schutzmaßnahmen polarer Ökosysteme gegenüber fortschreitendem globalen Wandel bilden.

Development of a modelling system for prediction and regulation of livestock waste pollution in the humid tropics

Introduction: In Malaysia, excessive nutrients from livestock waste management systems are currently released to the environment. Particularly, large amounts of manure from intensive pig production areas are being excreted daily and are not being fully utilised. Alternatively, the excess manure can be applied as an organic fertiliser source in neighbouring cropping systems on the small landholdings of the pig farms to improve soil fertility so that its nutrients will be available for crop uptake instead of being discharged into water streams. Thus, there is a need for better tools to analyse the present situation, to evaluate and monitor alternative livestock production systems and manure management scenarios, and to support farmers in the proper management of manure and fertiliser application. Such tools are essential to quantify, and assess nutrient fluxes, manure quality and content, manure storage and application rate to the land as well as its environmental effects. Several computer models of animal waste management systems to assist producers and authorities are now available. However, it is felt that more development is needed to adopt such models to the humid tropics and conditions of Malaysia and other developing countries in the region. Objectives: The aim is to develop a novel model to evaluate nutrient emission scenarios and the impact of livestock waste at the landscape or regional level in humid tropics. The study will link and improve existing models to evaluate emission of N to the atmosphere, and leaching of nutrients to groundwater and surface water. The simulation outputs of the models will be integrated with a GIS spatial analysis to model the distribution of nutrient emission, leaching and appropriate manure application on neighbouring crop lands and as an information and decision support tool for the relevant users.

Biogenic formation of non-extractable residues from pesticides in soil

During microbial turnover of organic chemicals in soil, non-extractable residues (NER) are formed frequently. Studies on NER formation usually performed with radioisotope labelled tracer compounds are limited to localisation and quantitative analyses but their chemical composition is left unknown. Recently, we could show for 2,4-dichlorophenoxyacetic acid and ibuprofen that during microbial turnover in soil nearly all NER were derived from microbial biomass, since degrading bacteria use the pollutant carbon for their biomass synthesis. Their cell debris is subsequently stabilised within soil organic matter (SOM) forming biogenic NER (bioNER). It is still unknown whether bioNER are also formed during biodegradation of other, structurally different compound classes of organic contaminants. Therefore, agricultural soil will be incubated with labelled compounds of five classes of commonly used and emerging pesticides: organophosphate, phenylurea, triazinone, benzothiadiazine and aryloxyphenoxypropionic acid. The fate of the label will be monitored in both living and non-living SOM pools and the formation of bioNER will be quantified for each compound over extended periods of time. In addition, soil samples from long-term lysimeter studies with 14C-labelled pesticide residues (e.g. triazine, benzothiazole and phenoxypropionic acid group) will be also analysed for bioNER formation. The results will be summarised to identify the metabolic conditions of microorganisms needed for bioNER formation and to develop an extended concept of risk assessment including bioNER formation in soils.

Ecotoxicology of Organotin compounds

Organotin and especially butyltin compounds are used for a variety of applications, e.g. as biocides, stabilizers, catalysts and intermediates in chemical syntheses. Tributyltin (TBT) compounds exhibit the greatest toxicity of all organotins and have even been characterized as one of the most toxic groups of xenobiotics ever produced and deliberately introduced into the environment. TBT is not only used as an active biocidal compound in antifouling paints, which are designed to prevent marine and freshwater biota from settlement on ship hulls, harbour and offshore installations, but also as a biocide in wood preservatives, textiles, dispersion paints and agricultural pesticides. Additionally, it occurs as a by-product of mono- (MBT) and dibutyltin (DBT) compounds, which are used as UV stabilizer in many plastics and for other applications. Triphenyltin (TPT) compounds are also used as the active biocide in antifouling paints outside Europe and furthermore as an agricultural fungicide since the early 1960s to combat a range of fungal diseases in various crops, particularly potato blight, leaf spot and powdery mildew on sugar beet, peanuts and celery, other fungi on hop, brown rust on beans, grey moulds on onions, rice blast and coffee leaf rust. Although the use of TBT and TPT was regulated in many countries world-wide from restrictions for certain applications to a total ban, these compounds are still present in the environment. In the early 1970s the impact of TBT on nontarget organisms became apparent. Among the broad variety of malformations caused by TBT in aquatic animals, molluscs have been found to be an extremely sensitive group of invertebrates and no other pathological condition produced by TBT at relative low concentrations rivals that of the imposex phenomenon in prosobranch gastropods speaking in terms of sensitivity. TBT induces imposex in marine prosobranchs at concentrations as low as 0,5 ng TBT-Sn/L. Since 1993, for the littorinid snail Littorina littorea a second virilisation phenomenon, termed intersex, is known. In female specimens affected by intersex the pallial oviduct is transformed of towards a male morphology with a final supplanting of female organs by the corresponding male formations. Imposex and intersex are morphological alterations caused by a chronic exposure to ultra-trace concentrations of TBT. A biological effect monitoring offers the possibility to determine the degree of contamination with organotin compounds in the aquatic environment and especially in coastal waters without using any expensive analytical methods. Furthermore, the biological effect monitoring allows an assessment of the existing TBT pollution on the basis of biological effects. Such results are normally more relevant for the ecosystem than pure analytical data. usw.

Forschergruppe (FOR) 1525: INUIT - Ice Nuclei research UnIT, In-situ Messungen von eiskeimbildenden Partikeln (INP) und quantitative Bestimmung von biologischen INP

Die Bildung der Eis Phase in der Troposphäre stellt einen wichtigen Fokus der aktuellen Atmosphärenforschung dar. Durch heterogene Nukleation entstehen bei Temperaturen oberhalb von -37°C primäre Eiskristalle an sogenannten eiskeimbildenden Partikeln (INP, engl, ice nucleating particles). Die räumliche Verteilung der INP und deren Quellen variieren stark. In der Atmosphäre finden sich INP nur in sehr geringer Anzahlkonzentration, oft weniger als ein Partikel pro Liter, und sie stellen nur eine kleine Untergruppe des gesamten atmosphärischen Aerosols dar. Ziel dieses Antrages ist es die Anzahlkonzentrationen von eiskeimbildenden Partikeln und deren Variabilität in der Atmosphäre zu messen. Außerdem sind Laborstudien geplant, in denen unser Verständnis über die chemischen und biologischen Eigenschaften der Partikel, die die Eisbildung initiieren, verbessert werden soll. Mit dem von unserer Arbeitsgruppe entwickelten Eiskeimzahler FINCH (Fast Ice Nucleaus CHamber) sollen die atmosphärischen Anzahlkonzentrationen von INP bei verschiedenen Gefriertemperaturen und Übersättigungen an mehreren Standorten gemessen werden. Die Kopplung von FINCH mit einem virtuellen Gegenstromimpaktor (CVI, engl, counter-flow virtual impactor, Kooperation mit RP2), die während lNUIT-1 entwickelt und getestet wurde, soll nun weiter charakterisiert und Messungen damit fortgesetzt werden. Bei dieser Methode werden die Eispartikel, die in FINCH gebildet werden, von den unterkühlten Tröpfchen und inaktivierten Partikeln separiert und mit weiteren Messmethoden untersucht. In Kooperation mit RP2 und RP8 planen wir hierbei die Charakterisierung der INP mittels Größen- und Aerosolmassenspektrometer sowie die Sammlung der INP auf Filtern oder Impaktorplatten zur anschließenden Analyse mit einem Elektronenmikroskop (ESEM, engl. DFG fomi 54.011 -04/14 page 3 of 6 Environmental Scanning Electron Microscopy). Die Feldmessdaten werden von umfangreichen Laborstudien an den Forschungseinrichtungen AIDA (RP6) und LACIS (RP7) ergänzt. Dort soll das Immersionsgefrieren von verschiedenen Testpartikeln aus biologischem Material (z.B. Zellulose), porösem Material (z.B. Zeolith) und Mineralstaub mit geringem organischem Anteil im Detail untersucht werden. Des Weiteren planen wir Labormessungen, bei denen eine verbesserte Charakterisierung der Messunsicherheiten von FINCH erarbeitet werden soll. Außerdem werden regelmäßige Tests und Kalibrierungen mit FINCH durchgeführt, für die Standardroutinen festgelegt werden sollen. Um die Rolle der INP bei der Wolken- und Niederschlagsbildung sowie bei den Wolkeneigenschaften abzuschätzen, werden die gewonnenen Messergebnisse am Ende als Eingabeparameter für erweiterte Wolkenmodelle (Kooperation mit WP-M) dienen.

Spatial heterogeneity and substrate availability as limiting factors for subsoil C-turnover

In subsoils, organic matter (SOM) concentrations and microbial densities are much lower than in topsoils and most likely highly heterogeneously distributed. We therefore hypothesize, that the spatial separation between consumers (microorganisms) and their substrates (SOM) is an important limiting factor for carbon turnover in subsoils. Further, we expect microbial activity to occur mainly in few hot spots, such as the rhizosphere or flow paths where fresh substrate inputs are rapidly mineralized. In a first step, the spatial distribution of enzyme and microbial activities in top- and subsoils will be determined in order to identify hot spots and relate this to apparent 14C age, SOM composition, microbial community composition and soil properties, as determined by the other projects within the research unit. In a further step it will be determined, if microbial activity and SOM turnover is limited by substrate availability in spatially distinct soil microsites. By relating this data to root distribution and preferential flow paths we will contribute to the understanding of stabilizing and destabilizing processes of subsoil organic matter. As it is unclear, at which spatial scale these differentiating processes are effective, the analysis of spatial variability will cover the dm to the mm scale. As spatial segregation between consumers and substrates will depend on the pore and aggregate architecture of the soil, the role of the physical integrity of these structures on SOM turnover will also be investigated in laboratory experiments.

Klassifizierung ausgewählter Mesofauna-Taxozönosen (Collembola, Gamasina) von Feldrainen

Ziel der Forschungsarbeit ist die Klassifizierung von Boden-Biozönosen in ausgewählten Feldrainen. In drei Naturräumen (Lössböden der Jülicher Börde, Muschelkalkböden in Mainfranken und pleistozäne Sande bei Leipzig) werden typische Lebensgemeinschaften von Collembola und Gamasina (Taxozönosen) beschrieben. Der wesentliche Unterschied zu anderen Klassifikations-Ansätzen liegt in der induktiven Vorgehensweise: Biozönosen werden allein aufgrund der Artenzusammensetzung an den Standorten typisiert. Vegetationskundliche Kriterien dienen als entscheidendes Hilfsmittel zur Vorauswahl von Flächen mit ähnlichen Standortbedingungen. Hierbei wird gleichzeitig die aufgenommene Vegetation als ein weiteres Taxon der zu beschreibenden Biozönose angesehen. Die typische Artenzusammensetzung ist das integrierte Ergebnis aller denkbaren ökologischen Vorgänge. Ein Ziel der Arbeit ist somit die prospektive Formulierung von Erwartungswerten für Collembolen und Raubmilben auf der Basis vegetationskundlicher Daten. Es sollte daher möglich sein, dieses Mehrarten-System mit hoher Sensibilität zur Bioindikation von Standortveränderungen einzusetzen. Die Kenntnis der Artenstruktur wiederkehrender Lebensgemeinschaften kann der funktionellen Ökosystemforschung hilfreiche Hinweise bieten.

The parent material as major factor for the properties of the biogeochemical interface: Integrative analysis

The formation of biogeochemical interfaces in soils is controlled, among other factors, by the type of particle surfaces present and the assemblage of organic matter and mineral particles. Therefore, the formation and maturation of interfaces is studied with artificial soils which are produced in long-term biogeochemical laboratory incubation experiments (3, 6, 12, 18 months. Clay minerals, iron oxides and charcoal are used as major model components controlling the formation of interfaces because they exhibit high surface area and microporosity. Soil interface characteristics have been analyzed by several groups involved in the priority program for formation of organo-mineral interfaces, sorptive and thermal interface properties, microbial community structure and function. Already after 6 months of incubation, the artificial soils exhibited different properties in relation to their composition. A unique dataset evolves on the development and the dynamics of interfaces in soil in the different projects contributing to this experiment. An integrated analysis based on a conceptual model and multivariate statistics will help to understand overall processes leading to the biogeochemical properties of interfaces in soil, that are the basis for their functions in ecosystems. Therefore, we propose to establish an integrative project for the evaluation of data obtained and for publication of synergistic work, which will bring the results to a higher level of understanding.

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