Fusarium species of the Gibberella fujikuroi species complex cause serious diseases on different crops such as rice, wheat and maize. An important group of plant pathogens is the Gibberella fujikuroi species complex (GFC) of closely related Fusarium species which are associated with specific hosts; F. verticillioides and F. proliferatum are particularly associated with maize where they can cause serious ear-, root-, and stalk rot diseases. Two other closely related species of the GFC, F. mangiferae and F. fujikuroi, which share about 90Prozent sequence identity with F. verticillioides, are pathogens on mango and rice, respectively. All of these species produce a broad spectrum of secondary metabolites such as phytohormones (gibberellins, auxins, and cytokinins), and harmful mycotoxins, such as fumonisin, fusarin C, or fusaric acid in large quantities. However, the spectrum of those mycotoxins might differ between closely related species suggesting that secondary metabolites might be determinants for host specificity. In this project, we will study the potential impact of secondary metabolites (i.e. phytohormones and certain mycotoxins) and some other species-specific factors (e.g. species-specific transcription factors) on host specificity. The recently sequenced genomes of F. mangiferae and F. fujikuroi by our groups and the planned sequencing of F. proliferatum will help to identify such determinants by genetic manipulation of the appropriate metabolic pathway(s).
In my project I aim at a better understanding of the evolution of malacostracan crustaceans, which includes very different groups such as mantis shrimps, krill and lobsters. Previous studies on Malacostraca, on extant as well as on fossil representatives, focussed on adult morphology.In contrast to such approaches, I will apply a Palaeo-Evo-Devo approach to shed new light on the evolution of Malacostraca. Palaeo-Evo-Devo uses data of different developmental stages of fossil malacostracan crustaceans, such as larval and juvenile stages. With this approach I aim at bridging morphological gaps between the different diverse lineages of modern malacostracans by providing new insights into the character evolution in these lineages.An extensive number of larval and juvenile malacostracans is present in the fossil record, but which have only scarcely been studied. The backbone of this project will be on malacostracans from the Solnhofen Lithographic Limestones (ca. 150 million years old), which are especially well preserved and exhibit minute details. During previous studies, I developed new documentation methods for tiny fossils from these deposits, e.g., fluorescence composite microscopy, and also discovered the first fossil mantis shrimp larvae. For malcostracan groups that do not occur in Solnhofen, I will investigate fossils from other lagerstätten, e.g., Mazon Creek and Bear Gulch (USA), or Montceaules- Mines and La-Voulte-sur-Rhône (France). The main groups in focus are mantis shrimps and certain other shrimps (e.g., mysids, caridoids), as well as the bottom-living ten-footed crustaceans (reptantians). Examples for studied structures are leg details, including the feeding apparatus, but also eyes. The results will contribute to the reconstruction of 3D computer models.The data collected in this project will be used for evaluating the relationships within Malacostraca, but mainly for providing plausible evolutionary scenarios, how the modern malacostracan diversity evolved. With the Palaeo-Evo-Devo approach, I am also able to detect shifts in developmental timing, called heterochrony, which is interpreted as one of the major driving forces of evolution. Finally, the reconstructed evolutionary patterns can be compared between the different lineages for convergencies. These comparisons might help to explain the convergent adaptation to similar ecological niches in different malacostracan groups, e.g., life in the deep sea, life on the sea bottom, evolution of metamorphosis or of predatory larvae.As the project requires the investigation of a large number of specimens in different groups, I will assign distinct sub-projects to three doctoral researchers. The results of this project will not only be published in peer-reviewed journals, but will also be presented to the non-scientific public, e.g., during fossil fairs or museum exhibitions with 3D models engraved in glass blocks.
Organotin and especially butyltin compounds are used for a variety of applications, e.g. as biocides, stabilizers, catalysts and intermediates in chemical syntheses. Tributyltin (TBT) compounds exhibit the greatest toxicity of all organotins and have even been characterized as one of the most toxic groups of xenobiotics ever produced and deliberately introduced into the environment. TBT is not only used as an active biocidal compound in antifouling paints, which are designed to prevent marine and freshwater biota from settlement on ship hulls, harbour and offshore installations, but also as a biocide in wood preservatives, textiles, dispersion paints and agricultural pesticides. Additionally, it occurs as a by-product of mono- (MBT) and dibutyltin (DBT) compounds, which are used as UV stabilizer in many plastics and for other applications. Triphenyltin (TPT) compounds are also used as the active biocide in antifouling paints outside Europe and furthermore as an agricultural fungicide since the early 1960s to combat a range of fungal diseases in various crops, particularly potato blight, leaf spot and powdery mildew on sugar beet, peanuts and celery, other fungi on hop, brown rust on beans, grey moulds on onions, rice blast and coffee leaf rust. Although the use of TBT and TPT was regulated in many countries world-wide from restrictions for certain applications to a total ban, these compounds are still present in the environment. In the early 1970s the impact of TBT on nontarget organisms became apparent. Among the broad variety of malformations caused by TBT in aquatic animals, molluscs have been found to be an extremely sensitive group of invertebrates and no other pathological condition produced by TBT at relative low concentrations rivals that of the imposex phenomenon in prosobranch gastropods speaking in terms of sensitivity. TBT induces imposex in marine prosobranchs at concentrations as low as 0,5 ng TBT-Sn/L. Since 1993, for the littorinid snail Littorina littorea a second virilisation phenomenon, termed intersex, is known. In female specimens affected by intersex the pallial oviduct is transformed of towards a male morphology with a final supplanting of female organs by the corresponding male formations. Imposex and intersex are morphological alterations caused by a chronic exposure to ultra-trace concentrations of TBT. A biological effect monitoring offers the possibility to determine the degree of contamination with organotin compounds in the aquatic environment and especially in coastal waters without using any expensive analytical methods. Furthermore, the biological effect monitoring allows an assessment of the existing TBT pollution on the basis of biological effects. Such results are normally more relevant for the ecosystem than pure analytical data. usw.
Die Bildung der Eis Phase in der Troposphäre stellt einen wichtigen Fokus der aktuellen Atmosphärenforschung dar. Durch heterogene Nukleation entstehen bei Temperaturen oberhalb von -37°C primäre Eiskristalle an sogenannten eiskeimbildenden Partikeln (INP, engl, ice nucleating particles). Die räumliche Verteilung der INP und deren Quellen variieren stark. In der Atmosphäre finden sich INP nur in sehr geringer Anzahlkonzentration, oft weniger als ein Partikel pro Liter, und sie stellen nur eine kleine Untergruppe des gesamten atmosphärischen Aerosols dar. Ziel dieses Antrages ist es die Anzahlkonzentrationen von eiskeimbildenden Partikeln und deren Variabilität in der Atmosphäre zu messen. Außerdem sind Laborstudien geplant, in denen unser Verständnis über die chemischen und biologischen Eigenschaften der Partikel, die die Eisbildung initiieren, verbessert werden soll. Mit dem von unserer Arbeitsgruppe entwickelten Eiskeimzahler FINCH (Fast Ice Nucleaus CHamber) sollen die atmosphärischen Anzahlkonzentrationen von INP bei verschiedenen Gefriertemperaturen und Übersättigungen an mehreren Standorten gemessen werden. Die Kopplung von FINCH mit einem virtuellen Gegenstromimpaktor (CVI, engl, counter-flow virtual impactor, Kooperation mit RP2), die während lNUIT-1 entwickelt und getestet wurde, soll nun weiter charakterisiert und Messungen damit fortgesetzt werden. Bei dieser Methode werden die Eispartikel, die in FINCH gebildet werden, von den unterkühlten Tröpfchen und inaktivierten Partikeln separiert und mit weiteren Messmethoden untersucht. In Kooperation mit RP2 und RP8 planen wir hierbei die Charakterisierung der INP mittels Größen- und Aerosolmassenspektrometer sowie die Sammlung der INP auf Filtern oder Impaktorplatten zur anschließenden Analyse mit einem Elektronenmikroskop (ESEM, engl. DFG fomi 54.011 -04/14 page 3 of 6 Environmental Scanning Electron Microscopy). Die Feldmessdaten werden von umfangreichen Laborstudien an den Forschungseinrichtungen AIDA (RP6) und LACIS (RP7) ergänzt. Dort soll das Immersionsgefrieren von verschiedenen Testpartikeln aus biologischem Material (z.B. Zellulose), porösem Material (z.B. Zeolith) und Mineralstaub mit geringem organischem Anteil im Detail untersucht werden. Des Weiteren planen wir Labormessungen, bei denen eine verbesserte Charakterisierung der Messunsicherheiten von FINCH erarbeitet werden soll. Außerdem werden regelmäßige Tests und Kalibrierungen mit FINCH durchgeführt, für die Standardroutinen festgelegt werden sollen. Um die Rolle der INP bei der Wolken- und Niederschlagsbildung sowie bei den Wolkeneigenschaften abzuschätzen, werden die gewonnenen Messergebnisse am Ende als Eingabeparameter für erweiterte Wolkenmodelle (Kooperation mit WP-M) dienen.
Rain-cracking limits the production of many soft and fleshy fruit including sweet cherries world wide. Cracking is thought to result from increased water uptake through surface and pedicel. Water uptake increases fruit volume, and hence, turgor of cells (Pcell) and the pressure inside the fruit (Pfruit) and subjects the skin to tangential stress and hence, strain. When the strain exceeds the limits of extensibility the fruit cracks. This hypothesis is referred to as the Pfruit driven strain cracking. Based on this hypothesis cracking is related to two independent groups of factors: (1) water transport characteristics and (2) the intrinsic cracking susceptibility of the fruit defined as the amount of cracking per unit water uptake. The intrinsic cracking susceptibility thus reflects the mechanical constitution of the fruit. Most studies focussed on water transport through the fruit surface (factors 1), but only little information is available on the mechanical constitution (i.e., Pfruit and Pcell, tensile properties such as fracture strain, fracture pressure and modulus of elasticity of the exocarp; factors 2). The few published estimates of Pfruit in sweet cherry are all obtained indirectly (calculated from fruit water potential and osmotic potentials of juice extracts) and unrealistically high. They exceed those measured by pressure probe techniques in mature grape berry by several orders of magnitude. The objective of the proposed project is to test the hypothesis of the Pfruit driven strain cracking. Initially we will focus on establishing systems of widely differing intrinsic cracking susceptibility by varying species (sweet and sour cherry, Ribes and Vaccinium berries, plum, tomato), genotype (within sweet cherry), stage of development and temperature. These systems will then be used for testing the hypothesis of Pfruit driven strain cracking. We will quantify Pfruit und Pcell by pressure probe techniques and compression tests and the mechanical properties of the exocarp using biaxial tensile tests. When the presence of high Pfruit and Pcell is confirmed by direct measurements, subsequent studies will focus on the mode of failure of the exocarp (fracture along vs. across cell walls) and the relationship between failure thresholds and morphometric characteristics of the exocarp. However, when Pfruit und Pcell are low, the hypothesis of Pfruit driven strain cracking must be rejected and the mechanistic basis for low pressures (presence of apoplastic solutes) clarified on a temporal (in the course of development) and a spatial scale (exocarp vs. mesocarp). We focus on sweet cherry, because detailed information on this species and experience in extending the short harvest period is available. Where appropriate, other cracking susceptible species (sour cherry, plum, Vaccinium, Ribes, tomato) will be included to further extend the experimental period and to maximize the range in intrinsic cracking susceptibility.
In subsoils, organic matter (SOM) concentrations and microbial densities are much lower than in topsoils and most likely highly heterogeneously distributed. We therefore hypothesize, that the spatial separation between consumers (microorganisms) and their substrates (SOM) is an important limiting factor for carbon turnover in subsoils. Further, we expect microbial activity to occur mainly in few hot spots, such as the rhizosphere or flow paths where fresh substrate inputs are rapidly mineralized. In a first step, the spatial distribution of enzyme and microbial activities in top- and subsoils will be determined in order to identify hot spots and relate this to apparent 14C age, SOM composition, microbial community composition and soil properties, as determined by the other projects within the research unit. In a further step it will be determined, if microbial activity and SOM turnover is limited by substrate availability in spatially distinct soil microsites. By relating this data to root distribution and preferential flow paths we will contribute to the understanding of stabilizing and destabilizing processes of subsoil organic matter. As it is unclear, at which spatial scale these differentiating processes are effective, the analysis of spatial variability will cover the dm to the mm scale. As spatial segregation between consumers and substrates will depend on the pore and aggregate architecture of the soil, the role of the physical integrity of these structures on SOM turnover will also be investigated in laboratory experiments.
The vegetation of East and South African savannahs has been shaped by the complex interaction of geo-biophysical processes and human impact. For both regions a controversial discussion is pertinent, as to whether massive degradation threatens the sustainability of livelihoods in these regions. Rangeland vegetation is mainly affected by environmental conditions (soil and climate) and by livestock management. Extent and interaction of these drivers are not well understood but have profound impacts on the resilience and vulnerability of these systems to be shifted toward unfavourable degraded or bush encroached states. The project aims to analyse and model rangeland vegetation in response to range management including livestock, soil quality and climatic conditions and to assess the impacts of changes in these conditions on the resilience and vulnerability of rangeland systems. Field measurements, remote sensing of vegetation patterns and dynamics and simulation modelling will be used to understand the dynamics of rangeland vegetation. We will use the 'fast' or 'state' variables potential of pastures to produce palatable biomass, the variability of this production, and the system's potential to recover from disturbance impact as indicators of resilience. 'slow' variables that control (or drive) the 'fast' variables such as management, climate and soil variables are recorded in cooperation with other subprojects as with A1 for soil variables. Results of the project will show which management activities are most favourable for individual regions to sustain plant production in the long term.
In freshwater sediments, iron oxidation is dominated by phototrophic and chemotrophic (aerobic and nitrate-reducing) Fe(ll)-oxidizing microorganisms. Although these biogeochemical processes have been investigated in detail in laboratory studies, not much is known about their spatial distribution, interactions (e.g. competition) amongst each other, as well as their response towards environmental perturbations (i.e. temperature, geochemical variations (nutrient, organic matter input)). This research proposal aims to investigate the activity, abundance and resource competition between different chemotrophic (aerobic and (autotrophic/mixotrophic) anaerobic nitrate-reducing) and phototrophic ironoxidizing microorganisms. In order to better understand the spatial distribution of nitrate-reducing iron oxidizing bacteria, microbial nitrate-producing and competing, nitrate-depletion processes will also be studied throughout the sedimentary redox gradient. In addition, the activity and abundance of the ironoxidizing processes will be quantified with (geo)microbiological, molecular and novel spectral imaging techniques. Using high resolution geochemical measurements (microsensors) we will characterize the environmental conditions these bacteria experience in order to determine the role of spatial and functional niche competition in microbial iron oxidation and the interconnection to the N-cycle. Iron mineral formation will be investigated as a function of the microbial spatial and temporal activity, depending on environmental perturbations. The proposed research study will strongly improve the understanding of iron cycling, the interconnection to the N-cycle, as well as interactions and competition between phototrophic and chemotrophic metabolisms in aquatic environments.
SP0 is conceived for coordination of the ICON research, for internal and external scientific exchange as well as for investigating development pathways of land use on the Philippines. The SP0 team will supervise the project activities as a whole, including reporting and final synthesis. It will design the ICON homepage, establish and maintain a web-based database and present the project and its results in scientific forums and public media. It will organize collaboration and scientific exchange with international networks dealing with atmospheric processes, global carbon, nitrogen, water and energy cycles, and long-term ecological research. Specifically, SP0 is devoted to ensuring a sound integration of the ICON project within the scientific communities of Germany and SE Asia. Supported by the ICON local research coordinator based at and employed by IRRI, it will coordinate with the IRRI farm management to assist other ICON subprojects with field setup, routine data collection and technical backstopping.
The formation of biogeochemical interfaces in soils is controlled, among other factors, by the type of particle surfaces present and the assemblage of organic matter and mineral particles. Therefore, the formation and maturation of interfaces is studied with artificial soils which are produced in long-term biogeochemical laboratory incubation experiments (3, 6, 12, 18 months. Clay minerals, iron oxides and charcoal are used as major model components controlling the formation of interfaces because they exhibit high surface area and microporosity. Soil interface characteristics have been analyzed by several groups involved in the priority program for formation of organo-mineral interfaces, sorptive and thermal interface properties, microbial community structure and function. Already after 6 months of incubation, the artificial soils exhibited different properties in relation to their composition. A unique dataset evolves on the development and the dynamics of interfaces in soil in the different projects contributing to this experiment. An integrated analysis based on a conceptual model and multivariate statistics will help to understand overall processes leading to the biogeochemical properties of interfaces in soil, that are the basis for their functions in ecosystems. Therefore, we propose to establish an integrative project for the evaluation of data obtained and for publication of synergistic work, which will bring the results to a higher level of understanding.
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