Increasing population pressure is leading to unsustainable land use in North Vietnamese highlands and destruction of natural habitats. The resulting loss of biodiversity includes plant genetic resources - both wild (= non-cultivated) species and cultivated landraces - adapted to local conditions, and local knowledge concerning the plants. A particularly important group among endangered plants are the legumes (1) because Southeast Asia is a major centre of genetic diversity for this family, and (2) because the potential contribution of legumes to sustainable land use is, due to their multifunctionality (e.g., soil improvement, human and livestock nutrition), especially high. The project aims to contribute to the conservation and sustainable use of genetic resources of legumes with an integrated approach wherein a series of components are combined: (1) A participatory, indigenous knowledge survey complemented by information from the literature; (2) germplasm collection missions (for ex situ conservation) complemented by field evaluation and seed increase; (3) genetic diversity analysis of selected material by molecular markers; and (4) GIS based analysis of generated data to identify areas of particular genetic diversity as a basis for land area planning and in situ preservation recommendations. Project results are expected to be also applicable to similar highlands in Southeast Asia.
Cherry leaf roll virus (CLRV) is a plant pathogen of economic and ecologic importance. It is globally distributed in a wide range of forest, fruit, and ornamental trees and shrubs. In several areas of cherry and walnut production CLRV causes severe losses in yield and quality. With current reference to the rapid dissemination and strong symptom expression in Finnish birches and the Germany-wide distribution of CLRV in birches and elderberry, we continuously investigate and gradually reveal CLRV transmission pathways as by pollen, seeds or water. However, modes and interactions responsible for the wide intergeneric host transmission as well as for the exceptional CLRV epidemic in Fennoscandia still remain unknown. In this project systematic studies shall investigate biological vectors as a causal agent to finally derive control mechanisms and strategies to avoid new epidemics in different hosts and geographic regions. Detailed monitoring of the invertebrate fauna of birch stands/forests and elderberry plantations in Germany and Finland shall reveal potential vectors to subsequently study them in detail by approved virus detection methods and transmission experiments. Molecular analyses of the CLRV coat protein shall prove its role as a viral determinant for a virus/vector interaction. Consequently, this project essentially will contribute important answers on the CLRV epidemiology, and this will be a key element within the first network of research on plant viral pathogens in forest trees.
Chlorinated ethylenes are prevalent groundwater contaminants. Numerous studies have addressed the mechanism of their reductive dehalogenation during biodegradation and reaction with zero-valent iron. However, despite insight with purified enzymes and well-characterized chemical model systems, conclusive evidence has been missing that the same mechanisms do indeed prevail in real-world transformations. While dual kinetic isotope effect measurements can provide such lines of evidence, until now this approach has not been possible for chlorinated ethylenes because an adequate method for continuous flow compound specific chlorine isotope analysis has been missing. This study attempts to close this prevalent research gap by a combination of two complementary approaches. (1) A novel analytical method to measure isotope effects for carbon and chlorine. (2) A carefully chosen set of well-defined model reactants representing distinct dehalogenation mechanisms believed to be important in real-world systems. Isotope trends observed in biotic and abiotic environmental dehalogenation will be compared to these model reactions, and the respective mechanistic hypotheses will be confirmed or discarded. With this hypothesis-driven approach it is our goal to elucidate for the first timdehalogenation reactions.
Recent discussions on the path eco-hydromorphic research has followed in the past decades highlight the need for greater ecological input into this field. Traditional approaches have been criticized for being largely correlation-based (Vaughan et al., 2009) ecological black boxes (Leclerc, 2005) and strongly relying on weak, disproven and/or outdated assumptions about the dynamics of stream biota (Lancaster & Downes, 2010). In recognition of this, process-oriented research aiming at elucidating and quantifying causal mechanisms has been proposed as a promising approach, though challenging, to study the relations between flow, morphodynamics and biological populations in running waters. In terms of levels of biological organization, it has been recognized that processes determining the response of aquatic biota to hydromorphological alteration occur mainly at the population level. In this sense, relating demographic rates to flow and morphology seems to offer great potential for progress (Lancaster & Downes, 2010). Thus, tapping into existing ecological knowledge (e.g., key patch approach for habitat networks, Verboom et al. 2001; metapopulation theory, Levins 1970; Hanski & Gaggiotti 2004, landscape-scale estimations of habitat suitability and carrying capacity, Reijnen et al. 1995; Duel et al. 1995 2003; population-level viability estimations; Akçakaya 2001; resource utilization scales, ONeill et al. 1988; habitat-use patterns, Milne et al. 1989) in order to link ecology to hydromorphology at a more fundamental level constitutes an important path towards better science and management.
Der Oberflächenfilm (SML) ist die oberste dünne Schicht des Ozeans und Teil jeglicher Wechselwirkung zwischen Luft und Meer, wie Gasaustausch, atmosphärische Deposition und Aerosolemission. Die Anreicherung von organischer Materie (OM) in der SML modifiziert die Luft-Meer-Austauschprozesse, aber welche OM-Komponenten selektiv angereichert werden, sowie warum und wann sie dies tun, ist weitgehend unbekannt (Engel et al., 2017). Unsere bisherige Forschung hat gezeigt, dass Biopolymere aus photoautotropher Produktion wichtige Komponenten der SML sind und den Luft-Meer-Austausch beeinflussen, indem sie als Biotenside (Galgani et al., 2016; Engel et al., 2018) und als Quelle primärer organischer Aerosole (Trueblood et al., 2021) wirken. Die Motivation unseres Projektes ist es daher, die dynamischen Anreicherungsprozesse von OM in der SML aufzuklären und zu beschreiben, wobei ein besonderer Schwerpunkt auf der Auflösung der OM-Quellen liegt. Mit unserem Modellierungsansatz ist es das Ziel, unser mechanistisches Verständnis der Zusammenhänge zwischen den Wachstumsbedingungen des Planktons, der Produktion und der Freisetzung von Biomolekülen, einschließlich potentieller Tenside, und der Akkumulation von OM in der SML zu konsolidieren. Eine solche Modellentwicklung wird in hohem Maße von den Ergebnissen und Erkenntnissen der verschiedenen Teilprojekte des BASS-Konsortiums profitieren. Umgekehrt ist es unsere Motivation, ein Modell zu etablieren, das als Synthesewerkzeug für die Interpretation und Integration von Feld-, Mesokosmen- und Labormessungen der OM-Anreicherung in der SML anwendbar wird.Relevanz für die Forschungsgruppe BASS - SP1.1 wird die Quellen, die Menge und die biochemische Zusammensetzung von OM in der SML entschlüsseln und damit wichtige Informationen für alle BASS-Teilprojekte liefern. Der primäre Ursprung von OM im Oberflächenozean ist die photosynthetische Produktion und die wichtigsten biochemischen Komponenten von frisch produzierter OM, d.h. Kohlenhydrate, Aminosäuren und Lipide, unterliegen der mikrobiellen Verarbeitung (SP1.2) und Photoreaktionen innerhalb der SML (SP1.3, SP1.4) und füllen auch den Pool der gelösten organischen Substanz (DOM) auf (SP1.5). Die Modellentwicklung in SP1.1 stellt eine Verbindung zwischen der Produktion von OM und ihrer Anreicherung innerhalb der SML her und zielt darauf ab, die entsprechenden Auswirkungen auf den Luft-Meer-Gasaustausch (SP2.1) zu bestimmen, indem Änderungen des Impulsflusses auf den Ozeanoberflächenschichten (SP2.2) sowie des Auftriebs (SP2.3) berücksichtigt werden. Das vorgeschlagene SML-Submodell wird auf der Grundlage der Ergebnisse aus SP1.4 und SP2.3 verfeinert. Ergebnisse aus den Modellsensitivitätsanalysen werden ergänzende Informationen über oberflächenaktive Eigenschaften verschiedener OM Komponenten und deren Auswirkungen auf Luft-Meer-Austauschprozesse liefern, die innerhalb von BASS ausgewertet werden.
The basidiomycete Armillaria mellea s.l. is one of the most important root rot pathogens of forest trees and comprises several species. The aim of the project is to identify the taxa occurring inSwitzerland and to understand their ecological behaviour. Root, butt and stem rots caused by different fungi are important tree diseases responsible for significant economic losses. Armillaria spp. occur world-wide and are important components of many natural and managed forest ecosystems. Armillaria spp. are known saprothrophs as well as primary and secondary pathogens causing root and butt rot on a large number of woody plants, including forest and orchard trees as well as grape vine and ornamentals. The identification of several Armillaria species in Europe warrants research in the biology and ecology of the different species. We propose to study A. cepistipes for the following reasons. First, A. cepistipes is dominating the rhizomorph populations in most forest types in Switzerland. This widespread occurrence contrasts with the current knowledge about A. cepistipes, which is very limited. Second, because the pathogenicity of A. cepistipes is considered low this fungus has the potential for using as an antagonist to control stump colonising pathogenic fungi, such as A. ostoyae and Heterobasidion annosum. This project aims to provide a better understanding of the ecology of A. cepistipes in mountainous Norway spruce (Picea abies) forests. Special emphasis will be given to interactions of A. cepistipes with A. ostoyae, which is a very common facultative pathogen and which often co-occurs with A. cepistipes. The populations of A. cepistipes and A. ostoyae will be investigated in mountainous spruce forests were both species coexist. The fungi will be sampled from the soil, from stumps and dead wood, and from the root system of infected trees to determine the main niches occupied by the two species. Somatic incompatibility will be used to characterise the populations of each species. The knowledge of the spatial distribution of individual genets will allow us to gain insights into the mode of competition and the mode of spreading. Inoculation experiments will be used to determine the variation in virulence expression of A. cepistipes towards Norway spruce and to investigate its interactions with A. ostoyae.
Organische Aerosole (OA) sind wichtige Bestandteile atmosphärischer Partikel. Je nach Region können sie zwischen 20 und 90% der gesamten Submikron-Partikelmasse betragen. Dennoch sind organische Aerosolquellen, atmosphärische Prozesse und Ableitung sehr ungewiss. Vorrangiges Ziel dieses Antrages ist es, die Auswirkungen organischer Aerosole auf Luftqualität und Klima zu untersuchen. Dazu soll die Darstellung des Aerosolaufbaus und die Weiterentwicklung in einem globalen Klima-Chemie-Modell verbessert werden. Das geplante Vorhaben basiert auf einem rechnerisch effizienten Modul zur Beschreibung der Zusammensetzung und Entwicklung atmosphärischer Aerosole in der Atmosphäre (ORACLE), ein Teil des ECHAM5/MESSy (EMAC) Klima-Chemie-Modells. ORACLE wird unter Berücksichtigung aller auf Labor- und Feldmessungen basierenden neuesten Erkenntnissen und Entwicklungen aktualisiert werden, um den zunehmend oxidierenden, weniger flüchtigen und stärker hygroskopischen Charakter des organischen Aerosols während der atmosphärischen Alterung mittels Nachverfolgung ihrer beiden wichtigsten Parameter, Sättigungskonzentration und Sauerstoffgehalt, genauer darzustellen. Dieses Modellsystem soll eingesetzt werden, um die Unsicherheit hinsichtlich der Einflüsse organischer Aerosole auf die globale Luftqualität und den Strahlungsantrieb zu verringern, und zwar durch: i) Quantifizierung des relativen Beitrags der Bildung sekundärer organischer Aerosole (SOA) sowie Emissionen primärer organischer Aerosole (POA) auf den Gesamthaushalt organischer Aerosole in unterschiedlichen Umgebungen; ii) Quantifizierung des Beitrags von Biomasseverbrennung und Schadstoffemissionen sowie chemische Alterung und weiträumige Übertragung auf den Gesamthaushalt organischer Aerosole; iii) Ermittlung, inwieweit SOA Konzentrationen durch biogene und anthropogene Emissionen sowie photochemische Alterungsprozesse beeinträchtigt werden; iv) Untersuchung der Weiterentwicklung von SOA-Bildung aus natürlichen Quellen durch deren Interaktion mit anthropogenen Emissionen; v) Abschätzung der Auswirkungen photochemischer Alterungsprozesse auf die physikalisch-chemischen Eigenschaften organischer Aerosole (z.B. Hygroskopizität, Volatilität) und vi) Einschätzung der indirekten Auswirkungen organischer Aerosole auf das Klima. Vor allem aber wird der vorliegende Antrag der kommenden Generation von Chemie-Klimamodellen eine realistische Beschreibung der chemischen Entwicklung organischer Aerosole in der Atmosphäre liefern, was für die Reduzierung der Aerosol-Unsicherheiten in der Luftqualität und bei Klimasimulationen von wesentlicher Bedeutung ist. Es ist auch davon auszugehen, dass das Forschungsvorhaben wertvolle Informationen zu den Quellen und der Produktion von OA weltweit liefert, was derzeitige CCMs nicht leisten können und welche von Politikern zur Entwicklung zukünftiger wirksamer Emissionsminderungsstrategien genutzt werden können.
Research question: Agri-environment schemes play an increasingly important role in European CAP (Common Agricultural Policy) to support biodiversity and environment in agricultural landscapes. They have been implemented since 1992 and now cost a yearly 1.7 billion Euro. Still, there is no conclusive evidence that these schemes actually do contribute to the conservation of particularly biodiversity. The primary objective of this project is to evaluate the (cost-) effectiveness of European agri-environment schemes in protecting biodiversity and to determine the primary processes that determine their effectiveness. This project furthermore aims to determine how CAP may be introduced in candidate EU-members without unacceptable loss of biodiversity. It will provide simple guidelines how researchers, governmental authorities may efficiently evaluate agri-environmental measures. Aim: Agri-environment schemes have been used to protect biodiversity and environment in agricultural areas since 1992. Their effectiveness has never been reliably evaluated. This project aims to evaluate the (cost-)effectiveness of agri-environment schemes with respect to biodiversity conservation in five European countries. It will determine the proper scales that have to be addressed for conservation efforts for a range of species groups. It will determine the most important environmental factors that influence the effectiveness of the schemes. Based on this, recommendations will be made how the effectiveness of schemes may be improved and simple guidelines will be produced how ecological effects of agri-environment schemes can be evaluated efficiently by governmental authorities or other institutions. The ecological effects of the introduction of CAP in a candidate EU-member will be investigated to reduce negative side effects of anticipated land-use changes Scientific methods: We will examine the effectiveness of agri-environment schemes by surveying pairs of fields: a field with an agri-environment scheme and a nearby field that is conventionally managed. In five countries, in each country in three areas, and in each area on seven pairs of fields the species richness of birds, plants and three insect groups (pollinators, herbivores, predators) will be determined. Effects of schemes on pollination efficiency and pest control will be examined using indicator communities. Correlative studies will examine the effects of landscape structure, land-use intensity and species pool on the effectiveness of agri-environmental measures. The spatial scale that is relevant to nature conservation efforts will be investigated via the spatial distribution of species groups. The results will be used to formulate recommendations how to improve the effectiveness of agri-environment schemes and to construct a set of simple guidelines how schemes can be evaluated efficiently yet reliably.
Durum wheat is mainly grown as a summer crop. An introduction of a winter form failed until now due to the difficulty to combine winter hardiness with required process quality. Winter hardiness is a complex trait, but in most regions the frost tolerance is decisive. Thereby a major QTL, which was found in T. monococcum, T.aestivum, H. vulgare and S.cereale on chromosome 5, seems especially important. With genotyping by sequencing it is now possible to make association mapping based on very high dense marker maps, which delivers new possibilities to detect main and epistatic effects. Furthermore, new sequencing techniques allow candidate gene based association mapping. The main aim of the project is to unravel the genetic architecture of frost tolerance and quality traits in durum. Thereby, the objectives are to (1) determine the genetic variance, heritability and correlations among frost tolerance and quality traits, (2) examine linkage disequilibrium and population structure, (3) investigate sequence polymorphism at candidate genes for frost tolerance, and (4) perform candidate gene based and genome wide association mapping.
Cydia pomonella granulovirus (CpGV, Baculoviridae) is one of the most important agents for the control of codling moth (CM, Cydia pomonella, L.) in both biological and integrated pest management. The rapid emergence of resistance against CpGV-M, which was observed in about 40 European CM field populations from 2003 on, could be traced back to a single, dominant, sex-linked gene. Since then, resistance management has been based on mixtures of new CpGV isolates (CpGV-I12, -S), which are able to overcome this resistance. Recently, resistance even to these novel isolates was observed in CM field populations. This resistance does not follow the described dominant, sex-linked inheritance trait. At the same time, another isolate CpGV-V15 was identified showing high virulence against these resistant populations. To elucidate this novel resistance mechanism and to identify the resistance gene(s) involved, we propose a comprehensive analysis of this resistance on the cellular and genomic level of codling moth. Because of the lack of previous knowledge of the molecular mechanisms of virus resistance in insects, several different and complementary approaches will be pursued. This study will not only give an in-depth insight into the genetic possibilities for development of baculovirus resistance in CM field populations and how the virus overcomes it, but can also serve as an important model for other baculovirus-host interaction systems.
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