Fusarium species of the Gibberella fujikuroi species complex cause serious diseases on different crops such as rice, wheat and maize. An important group of plant pathogens is the Gibberella fujikuroi species complex (GFC) of closely related Fusarium species which are associated with specific hosts; F. verticillioides and F. proliferatum are particularly associated with maize where they can cause serious ear-, root-, and stalk rot diseases. Two other closely related species of the GFC, F. mangiferae and F. fujikuroi, which share about 90Prozent sequence identity with F. verticillioides, are pathogens on mango and rice, respectively. All of these species produce a broad spectrum of secondary metabolites such as phytohormones (gibberellins, auxins, and cytokinins), and harmful mycotoxins, such as fumonisin, fusarin C, or fusaric acid in large quantities. However, the spectrum of those mycotoxins might differ between closely related species suggesting that secondary metabolites might be determinants for host specificity. In this project, we will study the potential impact of secondary metabolites (i.e. phytohormones and certain mycotoxins) and some other species-specific factors (e.g. species-specific transcription factors) on host specificity. The recently sequenced genomes of F. mangiferae and F. fujikuroi by our groups and the planned sequencing of F. proliferatum will help to identify such determinants by genetic manipulation of the appropriate metabolic pathway(s).
Cydia pomonella granulovirus (CpGV, Baculoviridae) is one of the most important agents for the control of codling moth (CM, Cydia pomonella, L.) in both biological and integrated pest management. The rapid emergence of resistance against CpGV-M, which was observed in about 40 European CM field populations from 2003 on, could be traced back to a single, dominant, sex-linked gene. Since then, resistance management has been based on mixtures of new CpGV isolates (CpGV-I12, -S), which are able to overcome this resistance. Recently, resistance even to these novel isolates was observed in CM field populations. This resistance does not follow the described dominant, sex-linked inheritance trait. At the same time, another isolate CpGV-V15 was identified showing high virulence against these resistant populations. To elucidate this novel resistance mechanism and to identify the resistance gene(s) involved, we propose a comprehensive analysis of this resistance on the cellular and genomic level of codling moth. Because of the lack of previous knowledge of the molecular mechanisms of virus resistance in insects, several different and complementary approaches will be pursued. This study will not only give an in-depth insight into the genetic possibilities for development of baculovirus resistance in CM field populations and how the virus overcomes it, but can also serve as an important model for other baculovirus-host interaction systems.
Cherry leaf roll virus (CLRV) is a plant pathogen of economic and ecologic importance. It is globally distributed in a wide range of forest, fruit, and ornamental trees and shrubs. In several areas of cherry and walnut production CLRV causes severe losses in yield and quality. With current reference to the rapid dissemination and strong symptom expression in Finnish birches and the Germany-wide distribution of CLRV in birches and elderberry, we continuously investigate and gradually reveal CLRV transmission pathways as by pollen, seeds or water. However, modes and interactions responsible for the wide intergeneric host transmission as well as for the exceptional CLRV epidemic in Fennoscandia still remain unknown. In this project systematic studies shall investigate biological vectors as a causal agent to finally derive control mechanisms and strategies to avoid new epidemics in different hosts and geographic regions. Detailed monitoring of the invertebrate fauna of birch stands/forests and elderberry plantations in Germany and Finland shall reveal potential vectors to subsequently study them in detail by approved virus detection methods and transmission experiments. Molecular analyses of the CLRV coat protein shall prove its role as a viral determinant for a virus/vector interaction. Consequently, this project essentially will contribute important answers on the CLRV epidemiology, and this will be a key element within the first network of research on plant viral pathogens in forest trees.
Im letzten Jahrzehnt war der grönländische Eisschild mehreren Extremereignissen ausgesetzt, mit teils unerwartet starken Auswirkungen auf die Oberflächenmassebilanz und den Eisfluss, insbesondere in den Jahren 2010, 2012 und 2015. Einige dieser Schmelzereignisse prägten sich eher lokal aus (wie in 2015), während andere fast die gesamte Eisfläche bedeckten (wie in 2010).Mit fortschreitendem Klimawandel ist zu erwarten, dass extreme Schmelzereignisse häufiger auftreten und sich verstärken bzw. länger anhalten. Bisherige Projektionen des Eisverlustes von Grönland basieren jedoch typischerweise auf Szenarien, die nur allmähliche Veränderungen des Klimas berücksichtigen, z.B. in den Representative Concentration Pathways (RCPs), wie sie im letzten IPCC-Bericht genutzt wurden. In aktuellen Projektionen werden extreme Schmelzereignisse im Allgemeinen unterschätzt - und welche Konsequenzen dies für den zukünftigen Meeresspiegelanstieg hat, bleibt eine offene Forschungsfrage.Ziel des vorgeschlagenen Projektes ist es, die Auswirkungen extremer Schmelzereignisse auf die zukünftige Entwicklung des grönländischen Eisschildes zu untersuchen. Dabei werden die unmittelbaren und dauerhaften Auswirkungen auf die Oberflächenmassenbilanz und die Eisdynamik bestimmt und somit die Beiträge zum Meeresspiegelanstieg quantifiziert. In dem Forschungsprojekt planen wir zudem, kritische Schwellenwerte in der Häufigkeit, Intensität sowie Dauer von Extremereignissen zu identifizieren, die - sobald sie einmal überschritten sind - eine großräumige Änderung in der Eisdynamik auslösen könnten.Zu diesem Zweck werden wir die dynamische Reaktion des grönländischen Eisschilds in einer Reihe von Klimaszenarien untersuchen, in denen extreme Schmelzereignisse mit unterschiedlicher Wahrscheinlichkeit zu bestimmten Zeitpunkten auftreten, und die Dauer und Stärke prognostisch variiert werden. Um indirekte Effekte durch verstärktes submarines Schmelzen hierbei berücksichtigen zu können, werden wir das etablierte Parallel Ice Sheet Model (PISM) mit dem Linearen Plume-Modell (LPM) koppeln. Das LPM berechnet das turbulente submarine Schmelzen aufgrund von Veränderungen der Meerestemperatur und des subglazialen Ausflusses. Es ist numerisch sehr effizient, so dass das gekoppelte PISM-LPM Modell Ensemble-Läufe mit hoher Auflösung ermöglicht. Folglich kann eine breite Palette von Modellparametern und Klimaszenarien in Zukunftsprojektionen in Betracht gezogen werden.Mit dem interaktiv gekoppelten Modell PISM-LPM werden wir den Beitrag Grönlands zum Meeresspiegelanstieg im 21. Jahrhundert bestimmen, unter Berücksichtigung regionaler Veränderungen von Niederschlag, Oberflächen- und Meerestemperaturen, und insbesondere der Auswirkungen von Extremereignissen. Ein Hauptergebnis wird eine Risikokarte sein, die aufzeigt, in welchen kritischen Regionen Grönlands zukünftige extreme Schmelzereignisse den stärksten Eisverlust zur Folge hätten.
Boron (B) is an essential microelement for plants. Despite the use of modern fertilization methods, B deficiency still causes losses in agricultural plant production. Even though many positive effects of B on plant growth and physiology have been reported, a large majority of B functions and the regulatory mechanisms controlling the B nutritional status remain unknown. The main objective of this project is to elucidate how the greatly B deficiency-sensitive Brassica crop plants process and regulate their B status during vegetative and reproductive growth. In this context, the project aims at identifying the mode of action of B in mechanisms regulating the B status itself and uncovering those mechanisms contributing to B efficiency in different genotypes. Plant species subjected to investigation will be the agronomically important oilseed and vegetable plant Brassica napus (rapeseed) and its close relative the genetic and molecular model plant Arabidopsis thaliana. Questions addressed within the scope of this project should lead to a detailed understanding of mechanisms controlling B uptake and allocation from the level of the whole plant down to the cellular level. B transport routes and rates will be determined in sink- and source tissues and in developmental periods with a particularly high B demand. A special focus will be on the identification of B transport bottlenecks and the analysis of B deficiency-sensitive transport processes to and within the highly B-demanding reproductive organs. Recent studies in Arabidopsis suggest that Nodulin26-like Intrinsic Proteins (NIPs), which belong to the aquaporin channel protein family, are essential for plant B uptake and distribution. The systematic focus on the molecular and physiological characterization of B. napus NIPs will clarify their role in B transport and will identify novel NIP-associated mechanisms playing key roles in the B response network.To further resolve the mostly unknown impact of the B nutritional status on gene regulation and metabolism, a transcript and metabolite profile of B-sufficient and B-deficient rapeseed plants will be generated. Additionally, an Arabidopsis transcription factor knockout collection (greater 300 lines) will be screened for abnormalities in responses to the B nutritional status. This will identify yet unknown B-responsive genes (transcription factors and their targets) and gene products (enzymes or metabolite variations) playing key roles in signalling pathways and mechanisms regulating the B homeostasis. Boron (in form of boric acid) and arsenite (As) share in all likelihood the same NIP-mediated transport pathways. To assess the consequences of this dual transport pathway the so far unstudied impact of the plants B nutritional status on the accumulation and distribution of As will be investigated in B. napus. Moreover, the current dimension of the As contamination of Brassica-based food products, to which consumers are exposed to, will be analyzed. usw.
BACKGROUND: The Kingdom of Jordan belongs to the ten water scarcest countries in the world, and climate change is likely to increase the frequency of future droughts. Jordan is considered among the 10 most water impoverished countries in the world, with per capita water availability estimated at 170 m per annum, compared to an average of 1,000 m per annum in other countries. Jordan Government has taken the strategic decision to develop a conveyor system including a 325 km pipe to pump 100 million cubic meters per year of potable water from Disi-Mudawwara close to the Saudi Border in the south, to the Greater Amman area in the north. The construction of the water pipeline has started end of 2009 and shall be finished in 2013. Later on, the pipeline could serve as a major part of a national water carrier in order to convey desalinated water from the Red Sea to the economically most important central region of the country. The conveyor project will not only significantly increase water supplies to the capital, but also provide for the re-allocation of current supplies to other governorates, and for the conservation of aquifers. In the context of the Disi project that is co-funded by EIB two Environmental and Social Management Plans have been prepared: one for the private project partners and one for the Jordan Government. The latter includes the Governments obligation to re-balance water allocations to irrigation and to gradually restore the protected wetlands of Azraq (Ramsar site) east of Amman that has been depleted due to over-abstraction by re-directing discharge of highland aquifers after the Disi pipeline becomes operational. The Water Strategy recognizes that groundwater extraction for irrigation is beyond acceptable limits. Since the source is finite and priority should be given to human consumption it proposes to tackle the demand for irrigation through tariff adjustments, improved irrigation technology and disincentive to water intensive crops. The Disi aquifer is currently used for irrigation by farms producing all kinds of fruits and vegetables on a large scale and exporting most of their products to the Saudi and European markets and it is almost a third of Jordan's total consumption. The licenses for that commercial irrigation were finished by 2011/12. Whilst the licenses will be not renewed the difficulty will be the enforcement and satellite based information become an important supporting tool for monitoring. OUTLOOK: The ESA funded project Water management had the objective to support the South-North conveyor project and the activities of EIB together with the MWI in Jordan to ensure the supply of water for the increasing demand. EO Information provides a baseline for land cover and elevation and support the monitoring of further stages. usw.
Although global pesticide use increases steadily, our field-data based knowledge regarding exposure of non-target ecosystems is very restricted. Consequently, this meta-analysis will for the first time evaluate the worldwide available peer-reviewed information on agricultural insecticide concentrations in surface water or sediment and test the following two hypotheses: I) Insecticide concentrations in the field largely exceed regulatory threshold levels and II) Additional factors important for threshold level exceedances can be quantified using retrospective meta-analysis. A feasibility study using a restricted dataset (n = 377) suggested the significance of the expected results, i.e. an threshold level exceedance rate of more than 50Prozent of the detected concentrations. Subsequent to a comprehensive database search in the peer-reviewed literature of the past 60 years, analysis of covariance with the relevant threshold level exceedance as the continuous dependent variable (about 10,000 cases) will be performed and the impact of significant predictor variables will be quantified. Parameters not yet considered in pesticide exposure assessment will be included as independent variables, such as compound class, environmental regulatory quality, and sampling design. The simultaneous presence of several insecticide compounds as a well as their metabolites will also be considered in the evaluation. The present approach may provide an innovative and integrated view on the potential environmental side effects of global high-intensity agriculture and in particular of pesticides use.
The Tropical Glaciology Group's research on Kilimanjaro started in 2002 and is in progress. Central aspects of our research plan are: 1) Development of the working hypothesis: From a synopsis of (i) proxy data indicating changes in East African climate since ca. 1850, (ii) 20th century instrumental data (temperature and precipitation), and (iii) the observations and interpretations made during two periods of fieldwork (June 2001 and July 2002) a scenario of modern glacier retreat on Kibo is reconstructed. This scenario offers the working hypothesis for our project. 2) Impact of local climate on the glaciers: This goal involves micrometeorological measurements on the glaciers, and the application of collected data to full glacier energy and mass balance models. These models quantify the impact of local climate on a glacier, based on pure physical system knowledge. Our models are validated by measured mass loss and surface temperature. 3) Latest Extent of the Kilimanjaro glaciers: Here, a satellite image was analyzed to derive the surface area and spatial distribution of glaciers on Kilimanjaro in February 2003. To validate this approach, an aerial flight was conducted in July 2005. 4) Linking local climate to large-scale circulation: As glacier behavior on Kilimanjaro, a totally free-standing mountain, is likely to reflect changes in larger-scale climate, this goal explores the large-scale climate mechanisms driving local Kilimanjaro climate. Well known large-scale forcings of east African climate are sea surface temperature variations in the Pacific and, more important, in the Indian Ocean. 5) Regional modification of large-scale circulation: The regional precipitation response in East Africa due to large-scale forcing is not adequately resolved in a global climate model as used in 4). Thus, mesoscale model experiments with the numerical atmospheric model RAMS will be conducted within this goal. They are thought to reveal the modification of atmospheric flow by the Kilimanjaro massif on a regional scale. 6) Practical aspects: Based on micro- and mesoscale results, (i) how much water is provided by glaciers, (ii) providing future projections of glacier behavior as basis for economic and societal studies (practical part), e.g., for studies on the impact of vanishing glaciers on Kibo's touristic appeal, and (iii) which impact does deforestation on the Kilimanjaro slopes have on summit climate? Referring to item 2), two new automatic weather stations have been installed in February 2005. They complete a station operated by Massachusetts University on the surface of the Northern Icefield since 2000.
Durum wheat is mainly grown as a summer crop. An introduction of a winter form failed until now due to the difficulty to combine winter hardiness with required process quality. Winter hardiness is a complex trait, but in most regions the frost tolerance is decisive. Thereby a major QTL, which was found in T. monococcum, T.aestivum, H. vulgare and S.cereale on chromosome 5, seems especially important. With genotyping by sequencing it is now possible to make association mapping based on very high dense marker maps, which delivers new possibilities to detect main and epistatic effects. Furthermore, new sequencing techniques allow candidate gene based association mapping. The main aim of the project is to unravel the genetic architecture of frost tolerance and quality traits in durum. Thereby, the objectives are to (1) determine the genetic variance, heritability and correlations among frost tolerance and quality traits, (2) examine linkage disequilibrium and population structure, (3) investigate sequence polymorphism at candidate genes for frost tolerance, and (4) perform candidate gene based and genome wide association mapping.
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