Sauropod dinosaurs represent one of the most important components of Mesozoic terrestrial vertebrate faunas, yet their early evolution and diversification in the Jurassic is still poorly understood. Furthermore, most of the pertinent data so far comes from Early and Middle Jurassic rocks in eastern Asia. The only abundant basal sauropod material reported from the Western Hemisphere so far comes from the Middle Jurassic Cañadón Asfalto Formation of Chubut province, Argentina, from where two species, Patagosaurus fariasi and Volkheimeria chubutensis, have been described. Especially the first of these taxa has figured prominently in basal sauropod phylogenies. However, recent research suggests that more sauropods are represented in the original material referred to this species, and intensive fieldwork in the rocks that have yielded these materials has resulted in the recovery of a wealth of new material. Thus, the objective of this project is a revision of the original materials of Patagosaurus as well as an incorporation of new materials. The alpha taxonomy of the sauropods from the Cañadón Asfalto Formation will be established, detailed osteological descriptions of the different taxa provided and their significance for our understanding of early sauropod evolution will be evaluated.
In subsoils, organic matter (SOM) concentrations and microbial densities are much lower than in topsoils and most likely highly heterogeneously distributed. We therefore hypothesize, that the spatial separation between consumers (microorganisms) and their substrates (SOM) is an important limiting factor for carbon turnover in subsoils. Further, we expect microbial activity to occur mainly in few hot spots, such as the rhizosphere or flow paths where fresh substrate inputs are rapidly mineralized. In a first step, the spatial distribution of enzyme and microbial activities in top- and subsoils will be determined in order to identify hot spots and relate this to apparent 14C age, SOM composition, microbial community composition and soil properties, as determined by the other projects within the research unit. In a further step it will be determined, if microbial activity and SOM turnover is limited by substrate availability in spatially distinct soil microsites. By relating this data to root distribution and preferential flow paths we will contribute to the understanding of stabilizing and destabilizing processes of subsoil organic matter. As it is unclear, at which spatial scale these differentiating processes are effective, the analysis of spatial variability will cover the dm to the mm scale. As spatial segregation between consumers and substrates will depend on the pore and aggregate architecture of the soil, the role of the physical integrity of these structures on SOM turnover will also be investigated in laboratory experiments.
Outbreaks of foodborne illness linked to consumptions of fresh, or partially processed, agricultural products are a growing concern in industrialized and developing countries. The incidence of human pathogens on fresh fruits and vegetables is often related to the use of recycled wastewaster in surface irrigation as well as high amounts of animal manure in agricultural management practice. Thereby the soil inhabiting fauna plays an important role in the transport and dissemination of microorganisms. The focus of the proposed project is on nematodes, well known vectors for bacteria and viruses in soil. The major goals are to: (1) survey human pathogens in soil and on/in free-living and plant parasitic nematodes in agriculture field sites irrigated with recycled wastewater or fertilized with fresh animal manure in Israel and the Palestinian Authority, (2) assess the function of nematodes as vectors in transmitting bacteria from microbial hot spots to plants, and (3) localize bacteria on and/or within the nematode and identify bacterial factors required for survival in the nematode host. Understanding the mechanisms involved in dissemination of human pathogens by nematodes will enhance the ability to develop practical means to minimize contamination of fresh produce and increase safety in food production.
Flowering time (FTi) genes play a key role as regulators of complex gene expression networks, and the influence of these networks on other complex systems means that FTi gene expression triggers a cascade of regulatory effects with a broad global effect on plant development. Hence, allelic and expression differences in FTi genes can play a central role in phenotypic variation throughput the plant lifecycle. A prime example for this is found in Brassica napus, a phenotypically and genetically diverse species with enormous variation in vernalisation requirement and flowering traits. The species includes oilseed rape (canola), one of the most important oilseed crops worldwide. Previously we have identified QTL clusters related to plant development, seed yield and heterosis in winter oilseed rape that seem to be conserved in diverse genetic backgrounds. We suspect that these QTL are controlled by global regulatory genes that influence numerous traits at different developmental stages. Interestingly, many of the QTL clusters for yield and biomass heterosis appear to correspond to the positions of meta-QTL for FTi in spring-type and/or winter-type B. napus. Based on the hypothesis that diversity in FTi genes has a key influence on plant development and yield, the aim of this study is a detailed analysis of DNA sequence variation in regulatory FTi genes in B. napus, combined with an investigation of associations between FTi gene haplotypes, developmental traits, yield components and seed yield.
Chlorinated ethylenes are prevalent groundwater contaminants. Numerous studies have addressed the mechanism of their reductive dehalogenation during biodegradation and reaction with zero-valent iron. However, despite insight with purified enzymes and well-characterized chemical model systems, conclusive evidence has been missing that the same mechanisms do indeed prevail in real-world transformations. While dual kinetic isotope effect measurements can provide such lines of evidence, until now this approach has not been possible for chlorinated ethylenes because an adequate method for continuous flow compound specific chlorine isotope analysis has been missing. This study attempts to close this prevalent research gap by a combination of two complementary approaches. (1) A novel analytical method to measure isotope effects for carbon and chlorine. (2) A carefully chosen set of well-defined model reactants representing distinct dehalogenation mechanisms believed to be important in real-world systems. Isotope trends observed in biotic and abiotic environmental dehalogenation will be compared to these model reactions, and the respective mechanistic hypotheses will be confirmed or discarded. With this hypothesis-driven approach it is our goal to elucidate for the first timdehalogenation reactions.
It has been suggested that dying and decaying fine roots and root exudation represent important, if not the most important, sources of soil organic carbon (SOC) in forest soils. This may be especially true for deep-reaching roots in the subsoil, but precise data to prove this assumption are lacking. This subproject (1) examines the distribution and abundance of fine roots (greater than 2 mm diameter) and coarse roots (greater than 2 mm) in the subsoil to 240 cm depth of the three subsoil observatories in a mature European beech (Fagus sylvatica) stand, (2) quantifies the turnover of beech fine roots by direct observation (mini-rhizotron approach), (3) measures the decomposition of dead fine root mass in different soil depths, and (4) quantifies root exudation and the N-uptake potential with novel techniques under in situ conditions with the aim (i) to quantify the C flux to the SOC pool upon root death in the subsoil, (ii) to obtain a quantitative estimate of root exudation in the subsoil, and (iii) to assess the uptake activity of fine roots in the subsoil as compared to roots in the topsoil. Key methods applied are (a) the microscopic distinction between live and dead fine root mass, (b) the estimation of fine and coarse root age by the 14C bomb approach and annual ring counting in roots, (c) the direct observation of the formation and disappearance of fine roots in rhizotron tubes by sequential root imaging (CI-600 system, CID) and the calculation of root turnover, (d) the measurement of root litter decomposition using litter bags under field and controlled laboratory conditions, (e) the estimation of root N-uptake capacity by exposing intact fine roots to 15NH4+ and 15NO3- solutions, and (f) the measurement of root exudation by exposing intact fine root branches to trap solutions in cuvettes in the field and analysing for carbohydrates and amino acids by HPLC and Py-FIMS (cooperation with Prof. A. Fischer, University of Trier). The obtained data will be analysed for differences in root abundance and activity between subsoil (100-200 cm) and topsoil (0-20 cm) and will be related to soil chemical and soil biological data collected by the partner projects that may control root turnover and exudation in the subsoil. In a supplementary study, fine root biomass distribution and root turnover will also be studied at the four additional beech sites for examining root-borne C fluxes in the subsoil of beech forests under contrasting soil conditions of different geological substrates (Triassic limestone and sandstone, Quaternary sand and loess deposits).
Increasing population pressure is leading to unsustainable land use in North Vietnamese highlands and destruction of natural habitats. The resulting loss of biodiversity includes plant genetic resources - both wild (= non-cultivated) species and cultivated landraces - adapted to local conditions, and local knowledge concerning the plants. A particularly important group among endangered plants are the legumes (1) because Southeast Asia is a major centre of genetic diversity for this family, and (2) because the potential contribution of legumes to sustainable land use is, due to their multifunctionality (e.g., soil improvement, human and livestock nutrition), especially high. The project aims to contribute to the conservation and sustainable use of genetic resources of legumes with an integrated approach wherein a series of components are combined: (1) A participatory, indigenous knowledge survey complemented by information from the literature; (2) germplasm collection missions (for ex situ conservation) complemented by field evaluation and seed increase; (3) genetic diversity analysis of selected material by molecular markers; and (4) GIS based analysis of generated data to identify areas of particular genetic diversity as a basis for land area planning and in situ preservation recommendations. Project results are expected to be also applicable to similar highlands in Southeast Asia.
Soil structure determines a large part of the spatial heterogeneity in water storage and fluxes from the plot to the hillslope scale. In recent decades important progress in hydrological research has been achieved by including soil structure in hydrological models. One of the main problems herein remains the difficulty of measuring soil structure and quantifying its influence on hydrological processes. As soil structure is very often of biogenic origin (macropores), the main objective of this project is to use the influence of bioactivity and resulting soil structures to describe and support modelling of hydrological processes at different scales. Therefore, local scale bioactivity will be linked to local infiltration patterns under varying catchment conditions. At hillslope scale, the spatial distribution of bioactivity patterns will be linked to connectivity of subsurface structures to explain subsurface stormflow generation. Then we will apply species distribution modelling of key organisms in order to extrapolate the gained knowledge to the catchment scale. As on one hand, bioactivity influences the hydrological processes, but on the other hand the species distribution also depends on soil moisture contents, including the feedbacks between bioactivity and soil hydrology is pivotal for getting reliable predictions of catchment scale hydrological behavior under land use change and climate change.
Sekundäre Partikelneubildung ist eine Hauptquelle für atmosphärische Partikel mit wichtigen Folgen für das Klima und die menschliche Gesundheit. Dieses Vorhaben untersucht die Rolle von Luft Ionen bei der sekundären Partikelneubildung in Flussreaktor- und Aerosolkammer-Experimenten unter kontrollierten Laborbedingungen. Trotz beträchtlicher Fortschritte in der Messtechnik zur Untersuchung der atmosphärischen Nukleation und des Partikelwachstums bestehen weiterhin Verständnislücken hinsichtlich der grundlegenden physikalischen und chemischen Prozesse. Insbesondere die möglichen Effekte von Ionen-Partikel-Wechselwirkungen und von Ionenchemie auf die Partikelneubildung werden kontrovers diskutiert. In Ergänzung zu bestehenden Forschungsprogrammen hinsichtlich der Rolle von Ionen im initialen Nukleationsschritt wird vorgeschlagen, Ionen-Partikel-Wechselwirkungen während des anschließenden Partikelwachstums zu untersuchen und sich dabei auf direkte Messungen des Ladungszustands, der Wachstumsraten und der chemischen Zusammensetzung von sekundärem organischem Aerosol zu konzentrieren. Hierzu werden der Ladungszustand und die Wachstumsraten von Partikelpopulationen mit einem modifizierten Mobilitätspartikelspektrometer unter wohldefinierten Randbedingungen in Laborexperimenten quantifiziert. In einem nächsten Schritt werden die neuartigen Messmöglichkeiten unseres Aerosol-Massenspektrometers CAChUP voll ausgeschöpft, um den Beitrag verschiedener organischer Vorläufergase zur chemischen Zusammensetzung von sekundärem organischen Aerosol bei variierenden Ladungszuständen zu quantifizieren. Schließlich werden die Ergebnisse dieser Experimente durch Messungen zur sekundären organischen Partikelbildung bei wohldefinierten Ionenkonzentrationen an einer Aerosolkammer überprüft. Die vorgeschlagene Forschungsagenda ist somit darauf abgestimmt, mögliche ladungs-katalysierte chemische Mechanismen bei der sekundären Aerosolbildung besser einzuordnen.
Terrestrial green algae and cyanobacteria are typical and abundant components of biological soil crusts in the Polar Regions. These communities form water-stable aggregates that have important ecological roles in primary production, nitrogen fixation, nutrient cycling, water retention and stabilization of soils. Although available data on green algae and cyanobacteria are generally very limited for the Arctic and Antarctica, their functional importance as ecosystem developers in nutrient poor environments is regarded as high. Therefore, the main goal of the interdisciplinary project is, for the first time, a precise evaluation of their 1.) Biodiversity as well as of 2.) The infra-specific genetic diversity, 3.) ecophysiological performance and 4.) transcriptomics of the most abundant taxa in biological soil crusts isolated from the Antarctic Peninsula and Arctic Svalbard. Biodiversity will be investigated using a classical culture approach in combination with molecular-taxonomical methods as well as with metagenomics. The infra-specific genetic diversity of the most abundant green algae and cyanobacteria will be studied using fingerprinting techniques, and a range of selected populations characterized in relation to their physiological plasticity. Temperature and water availability, two key environmental factors for terrestrial organisms, are currently changing in Polar Regions due to global warming, and hence their effect on growth and photosynthesis response patterns will be comparatively investigated. The data will indicate whether and how global change influence population structure and ecological performance of key organisms in polar soil crusts, and help to make predictions on the future significance of the ecological functions of these pioneer communities. Such a multiphasic approach has never been applied before to soil algae and cyanobacteria in both Polar Regions, and hence represents one of the key innovations of this proposal.
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