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Ecosystem Engineering: Sediment entrainment and flocculation mediated by microbial produced extracellular polymeric substances (EPS)

Sediment erosion and transport is critical to the ecological and commercial health of aquatic habitats from watershed to sea. There is now a consensus that microorganisms inhabiting the system mediate the erosive response of natural sediments ('ecosystem engineers') along with physicochemical properties. The biological mechanism is through secretion of a microbial organic glue (EPS: extracellular polymeric substances) that enhances binding forces between sediment grains to impact sediment stability and post-entrainment flocculation. The proposed work will elucidate the functional capability of heterotrophic bacteria, cyanobacteria and eukaryotic microalgae for mediating freshwater sediments to influence sediment erosion and transport. The potential and relevance of natural biofilms to provide this important 'ecosystem service' will be investigated for different niches in a freshwater habitat. Thereby, variations of the EPS 'quality' and 'quantity' to influence cohesion within sediments and flocs will be related to shifts in biofilm composition, sediment characteristics (e.g. organic background) and varying abiotic conditions (e.g. light, hydrodynamic regime) in the water body. Thus, the proposed interdisciplinary work will contribute to a conceptual understanding of microbial sediment engineering that represents an important ecosystem function in freshwater habitats. The research has wide implications for the water framework directive and sediment management strategies.

Untersuchungen des Tagesgangs verschiedener Spurengase mit Hilfe der solaren Absorptionsspektroskopie im infraroten Spektralbereich im tropischen Westpazifik (TROPAC)

Der Ozean im Westpazifik ist mit Temperaturen von ganzjährig 30°C der wärmste Ozean der Welt. Im tropischen Westpazifik ist die Lufttemperatur der Grenzschicht weltweit am höchsten und die Ozonkonzentration am niedrigsten. Aufgrund der allgemeinen Advektion der Luftmassen in der unteren und mittleren Troposphäre aus dem Osten durch die Walker-Zirkulation über den Pazifik befindet sich die Luft über dem tropischen Westpazifik für längere Zeit in einer sauberen, warmen und feuchten Umgebung. Der Abbau von reaktiven Sauerstoff- und Ozonvorläufern wie NOx findet daher länger als anderswo in den Tropen, was zu sehr niedrigen Ozonkonzentrationen führte. Dies erhöht die Lebensdauer von kurzlebigen biogenen und anthropogenen Spurengasen. Darüber hinaus begünstigen hohe Meeresoberflächentemperaturen eine starke Konvektion im tropischen Westpazifik, was zu niedrigen Ozonmischungsverhältnissen in den konvektiven Ausflussgebieten in der oberen Troposphäre führen kann. Der Warmpool im Westpazifik ist auch eine wichtige Quellregion für stratosphärische Luft. Daher fallen die Region, in der die Lebensdauer kurzlebiger Spurengase erhöht ist, und die Quellregion der stratosphärischen Luft zusammen. Somit bestimmt die Zusammensetzung der troposphärischen Atmosphäre in dieser Region in hohem Maße auch die globale stratosphärische Zusammensetzung.Ozon ist aufgrund von Rückkopplungsprozessen zwischen Temperatur, Dynamik und Ozon ein wichtiges Spurengas in der Klimaforschung. Da der Warmpool im Westpazifik die Hauptquellenregion für stratosphärische Luft ist, ist die Kenntnis von Ozon und anderen kurzlebigen Spurengasen auch wichtig, um den Transport von Spurengasen in die Stratosphäre zu verstehen.Ziel unseres Projektes ist die Messung des Tagesgangs von Ozon und anderen Spurengasen mit Hilfe der hochauflösenden solaren Absorptions-FTIR-Spektroskopie. Die Messungen liefern die Gesamtsäulendichten von bis zu 20 Spurengasen. Für einige Spurengase erlaubt die Analyse der Spektrallinienform die Ableitung der Konzentrationsprofile in bis zu etwa vier atmosphärischen Höhenschichten. Ergänzt werden die Beobachtungen durch Ozonballonsondierungen, kontinuierliche Messungen der UV-Strahlung, und Modellrechnungen mit einem Chemie-Transport-Modell. Die Messungen sind für den Zeitraum August bis Oktober 2022 geplant, die Auswertung und Interpretation von November 2022 bis Januar 2023.

Ecological valuation of crop pollination in traditional Indonesian homegardens

Traditional Indonesian homegardens harbour often high crop diversity, which appears to be an important basis for a sustainable food-first strategy. Crop pollination by insects is a key ecosystem service but threatened by agricultural intensification and land conversion. Gaps in knowledge of actual benefits from pollination services limit effective management planning. Using an integrative and agronomic framework for the assessment of functional pollination services, we will conduct ecological experiments and surveys in Central Sulawesi, Indonesia. We propose to study pollination services and net revenues of the locally important crop species cucumber, carrot, and eggplant in traditional homegardens in a forest distance gradient, which is hypothesized to affect bee community structure and diversity. We will assess pollination services and interactions with environmental variables limiting fruit maturation, based on pollination experiments in a split-plot design of the following factors: drought, nutrient deficiency, weed pressure, and herbivory. The overall goal of this project is the development of 'biodiversity-friendly' land-use management, balancing human and ecological needs for local smallholders.

Evaluating current European agri-environment schemes to quantify and improve nature conservation efforts in agricultural landscapes (EASY)

Research question: Agri-environment schemes play an increasingly important role in European CAP (Common Agricultural Policy) to support biodiversity and environment in agricultural landscapes. They have been implemented since 1992 and now cost a yearly 1.7 billion Euro. Still, there is no conclusive evidence that these schemes actually do contribute to the conservation of particularly biodiversity. The primary objective of this project is to evaluate the (cost-) effectiveness of European agri-environment schemes in protecting biodiversity and to determine the primary processes that determine their effectiveness. This project furthermore aims to determine how CAP may be introduced in candidate EU-members without unacceptable loss of biodiversity. It will provide simple guidelines how researchers, governmental authorities may efficiently evaluate agri-environmental measures. Aim: Agri-environment schemes have been used to protect biodiversity and environment in agricultural areas since 1992. Their effectiveness has never been reliably evaluated. This project aims to evaluate the (cost-)effectiveness of agri-environment schemes with respect to biodiversity conservation in five European countries. It will determine the proper scales that have to be addressed for conservation efforts for a range of species groups. It will determine the most important environmental factors that influence the effectiveness of the schemes. Based on this, recommendations will be made how the effectiveness of schemes may be improved and simple guidelines will be produced how ecological effects of agri-environment schemes can be evaluated efficiently by governmental authorities or other institutions. The ecological effects of the introduction of CAP in a candidate EU-member will be investigated to reduce negative side effects of anticipated land-use changes Scientific methods: We will examine the effectiveness of agri-environment schemes by surveying pairs of fields: a field with an agri-environment scheme and a nearby field that is conventionally managed. In five countries, in each country in three areas, and in each area on seven pairs of fields the species richness of birds, plants and three insect groups (pollinators, herbivores, predators) will be determined. Effects of schemes on pollination efficiency and pest control will be examined using indicator communities. Correlative studies will examine the effects of landscape structure, land-use intensity and species pool on the effectiveness of agri-environmental measures. The spatial scale that is relevant to nature conservation efforts will be investigated via the spatial distribution of species groups. The results will be used to formulate recommendations how to improve the effectiveness of agri-environment schemes and to construct a set of simple guidelines how schemes can be evaluated efficiently yet reliably.

Drivers and mechanisms of 13C discrimination in Cleistogenes squarrosa (C4) - reducing uncertainties on bundle sheath leakiness

The energetic efficiency of C4 photosynthesis is strongly affected by bundle sheath leakiness, which is commonly assessed with the 'linear version' of the Farquhar model of 13C discrimination, and leaf gas exchange and 13C composition data. But, the linear Farquhar model is a simplification of the full mechanistic theory of ? in C4 plants, potentially generating errors in the estimation of leakiness. In particular, post-photosynthetic C isotope fractionation could cause large errors, but has not been studied in any detail. The present project aims to improve the understanding of the ecological and developmental/physiological factors controlling discrimination and leakiness of the perennial grass Cleistogenes squarrosa. C. squarrosa is the most important member of the C4 community which has spread significantly in the Mongolia grasslands in the last decades. It has an unusually high and variable discrimination, which suggests very high (and potentially highly variable) leakiness. Specifically, we will conduct the first systematic study of respiratory 13C fractionation in light and dark at leaf- and stand-scale in this C4 species, and assess its effect on discrimination and estimates of leakiness. These experiments are conducted in specialized 13CO2/12CO2 gas exchange mesocosms using ecologically relevant scenarios, testing specific hypotheses on effects of environmental drivers and plant and leaf developmental stage on discrimination and leakiness.

Ecological-physical linkages in fluvial eco-hydromorphology

Recent discussions on the path eco-hydromorphic research has followed in the past decades highlight the need for greater ecological input into this field. Traditional approaches have been criticized for being largely correlation-based (Vaughan et al., 2009) ecological black boxes (Leclerc, 2005) and strongly relying on weak, disproven and/or outdated assumptions about the dynamics of stream biota (Lancaster & Downes, 2010). In recognition of this, process-oriented research aiming at elucidating and quantifying causal mechanisms has been proposed as a promising approach, though challenging, to study the relations between flow, morphodynamics and biological populations in running waters. In terms of levels of biological organization, it has been recognized that processes determining the response of aquatic biota to hydromorphological alteration occur mainly at the population level. In this sense, relating demographic rates to flow and morphology seems to offer great potential for progress (Lancaster & Downes, 2010). Thus, tapping into existing ecological knowledge (e.g., key patch approach for habitat networks, Verboom et al. 2001; metapopulation theory, Levins 1970; Hanski & Gaggiotti 2004, landscape-scale estimations of habitat suitability and carrying capacity, Reijnen et al. 1995; Duel et al. 1995 2003; population-level viability estimations; Akçakaya 2001; resource utilization scales, ONeill et al. 1988; habitat-use patterns, Milne et al. 1989) in order to link ecology to hydromorphology at a more fundamental level constitutes an important path towards better science and management.

Native plants and mycorrhizal fungi in wind erosion control in the Kailash-Manasarovar region (Tibet, China)

We study the effects of plants and root-associated fungi on wind erosion within the alpine environment of Tibet. China is one of the countries most affected by desertification processes and Tibet, in particular, a key region in desertification combat. The presented project focuses on the Barkha Plain surrounded by Mount Kailash and the Lake of Manasarovar (Ngari Prefecture). This Western Tibet region experienced little scientific attention but, nowadays, faces rapidly increasing touristic activities and expanding local settlements associated with socio-economic changes that are serious threats to the delicate ecological balance and potential triggers of desertification. It exists almost unanimous agreement that revegetation is the most efficient and promising strategy to combat wind erosion and desertification in the long term. However, re-colonising success is often poor, mainly under extreme environmental conditions. Compared to conventional practices, the approach of the presented project attains better accordance with natural succession processes and promises acceleration of both plant and soil development and, conclusively, more efficient desertification control. The project assesses the potential of native plants and symbiotic fungi to control wind erosion and desertification processes. It aims to identify key plants and fungi that increase soil aggregate stability and efficiently drive succession into a natural and self-maintaining cycle of the ecosystem. Furthermore, it provides crucial information for implementing environmentally compatible and cost-effective measures to protect high-elevation ecosystems against desertification. Within three successional stages (early, intermediate, late), field investigations are performed on the basis of Modified-Whittaker plots. Classic methods of vegetation analysis and myco-sociology are combined with analysis of distribution patterns at different scales (patchiness, connectivity). Comprehensive soil analysis is performed comprising grain size distribution, aggregate stability, pH as well as water and nutrient contents. Additionally, important parameters of wind erosion are measured concurrently and continuously to assess their magnitude and variability with respect to vegetation and soil at different levels of development. The parameters addressed, include sediment transport, air temperature, radiation, precipitation, relative humidity as well as speed and direction of wind. Surface moisture is recorded periodically and roughness described. Species and environmental parameters are checked for spatial correlation. Cutting edge technologies are applied in laboratory work, comprising molecular methods for fungal species identification and micro-tomography to analyse soil structure. Furthermore, successfully cultivated fungi and plants are subject of synthesis experiments and industrial propagation in view of practical implementation in restoration measures.

Der Einfluss der SML auf die Spurengasbiogeochemie und den Ozean-Atmosphäre-Gasaustausch

Labor- und Feldstudien zeigen, dass die Oberflächengrenzschicht des Ozeans (â€Ìsurface microlayerâ€Ì, kurz SML) die biogeochemischen Kreisläufe von klimaaktiven und atmosphärisch wichtigen Spurengasen wie Kohlenstoffdioxid (CO2), Kohlenstoffmonoxid (CO), Methan (CH4), Lachgas (N2O) und Dimethylsulfid (DMS) stark beeinflusst: (i) Jüngste Studien aus den PASSME- und SOPRAN-Projekten haben hervorgehoben, dass Anreicherungen von oberflächenaktiven Substanzen (d.h. Tensiden) einen starken (dämpfenden) Effekt sowohl auf die CO2- als auch auf die N2O-Flüsse über die SML/Atmosphären-Grenzfläche hinweg haben und (ii) Spurengase können durch (mikro)biologische oder (photo)chemische Prozesse in der SML produziert und verbraucht werden. Daher kann der oberste Teil des Ozeans, einschließlich der SML, verglichen mit dem Wasser, das in der Mischungsschicht unterhalb der SML zu finden ist, eine bedeutende Quelle oder Senke für diese Gase sein, was von sehr großer Relevanz für die Forschungseinheit BASS ist. Die Konzentrationen von CO2, N2O und anderen gelösten Gasen in der SML (oder den oberen Zentimetern des Ozeans) unterscheiden sich nachweislich von ihren Konzentrationen unterhalb der SML. Typischerweise werden die Nettoquellen und -senken wichtiger atmosphärischer Spurengase mit Konzentrationen berechnet, die in der Mischungsschicht gemessen wurden und mit Gasaustauschgeschwindigkeiten, die die SML nicht berücksichtigen. Diese Diskrepanzen führen zu falsch berechneten Austauschflüssen, die in der Folge zu großen Unsicherheiten in den Berechnungen der Klima-Antrieben und der Luftqualität in Erdsystemmodellen führen können. Durch die Verknüpfung unserer Spurengasmessungen mit Messungen von (i) der Dynamik und den molekularen Eigenschaften der organischen Materie und speziell des organischen Kohlenstoffs (SP1.1; SP1.5), (ii) der biologischen Diversität und der Stoffwechselaktivität (SP1.2), (iii) den optischen Eigenschaften der organischen Materie (SP1.3), (iv) der photochemischen Umwandlung der organischen Materie (SP1.4) und (v) den physikalischen Transportprozessen (SP2.3) werden wir ein umfassendes Verständnis darüber erlangen, wie die SML die Variabilität der Spurengasflüsse beeinflusst.

Emmy Noether-Nachwuchsgruppen, Mechanisms regulating the boron nutritional status in rapeseed and Arabidopsis and their implications for the development of boron-efficient genotypes

Boron (B) is an essential microelement for plants. Despite the use of modern fertilization methods, B deficiency still causes losses in agricultural plant production. Even though many positive effects of B on plant growth and physiology have been reported, a large majority of B functions and the regulatory mechanisms controlling the B nutritional status remain unknown. The main objective of this project is to elucidate how the greatly B deficiency-sensitive Brassica crop plants process and regulate their B status during vegetative and reproductive growth. In this context, the project aims at identifying the mode of action of B in mechanisms regulating the B status itself and uncovering those mechanisms contributing to B efficiency in different genotypes. Plant species subjected to investigation will be the agronomically important oilseed and vegetable plant Brassica napus (rapeseed) and its close relative the genetic and molecular model plant Arabidopsis thaliana. Questions addressed within the scope of this project should lead to a detailed understanding of mechanisms controlling B uptake and allocation from the level of the whole plant down to the cellular level. B transport routes and rates will be determined in sink- and source tissues and in developmental periods with a particularly high B demand. A special focus will be on the identification of B transport bottlenecks and the analysis of B deficiency-sensitive transport processes to and within the highly B-demanding reproductive organs. Recent studies in Arabidopsis suggest that Nodulin26-like Intrinsic Proteins (NIPs), which belong to the aquaporin channel protein family, are essential for plant B uptake and distribution. The systematic focus on the molecular and physiological characterization of B. napus NIPs will clarify their role in B transport and will identify novel NIP-associated mechanisms playing key roles in the B response network.To further resolve the mostly unknown impact of the B nutritional status on gene regulation and metabolism, a transcript and metabolite profile of B-sufficient and B-deficient rapeseed plants will be generated. Additionally, an Arabidopsis transcription factor knockout collection (greater 300 lines) will be screened for abnormalities in responses to the B nutritional status. This will identify yet unknown B-responsive genes (transcription factors and their targets) and gene products (enzymes or metabolite variations) playing key roles in signalling pathways and mechanisms regulating the B homeostasis. Boron (in form of boric acid) and arsenite (As) share in all likelihood the same NIP-mediated transport pathways. To assess the consequences of this dual transport pathway the so far unstudied impact of the plants B nutritional status on the accumulation and distribution of As will be investigated in B. napus. Moreover, the current dimension of the As contamination of Brassica-based food products, to which consumers are exposed to, will be analyzed. usw.

Natural Forest Management in Caracarai, Roraima, Brazil

Objectives: Sustainable management of tropical moist forests through private forest owners will become increasingly important. Media report that in Brazil, particularly in Amazonia, approx. 80 percent of the timber harvested is from illegal sources. Private management of forests according to internationally acknowledged standards offers an opportunity to significantly lower the portion of illegally cut timber. Moreover, it contributes significantly to the conservation of the Amazon forest. Private forest owners show a clear long-term commitment towards the implementation of management standards according that is ecologically compatible, socially acceptable and economically viable. The project area, a pristine forest in legal Amazonia in the transition zone between moist tropical forests and savannas (cerrado), is extremely diverse in floristic and faunistic terms. The institute cooperates with the private forest owner. Main tasks are to document the faunistic and floristic diversity, to calculate the Annual Allowable Cut and to elaborate concepts for site-specific silviculture. Results: To date (Oct. 2006) the following activities were started: - a comprehensive inventory system for planning at the FMU-level has been successfully introduced; - the inventory system for the annual coupe area has been designed and data for the first coupe are being processed; - the annual allowable cut is currently calculated based on the results of the above described inventories; - two fauna surveys are completed; one focusing on large mammals and one on the avi-fauna. A long-term monitoring concept to assess the influence of forest management on the faunistic diversity is currently under development; - forest zoning is completed applying terrestrial surveys and interpreting high-resolution satellite images; - a study on the use of Bethollethia excelsa-fruits (Brazil nuts) is currently implemented; - a study on timber properties of lesser known species is currently implemented.

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