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Found 460 results.

Flowering time, development and yield in oilseed rape (Brassica napus): Sequence diversity in regulatory genes

Flowering time (FTi) genes play a key role as regulators of complex gene expression networks, and the influence of these networks on other complex systems means that FTi gene expression triggers a cascade of regulatory effects with a broad global effect on plant development. Hence, allelic and expression differences in FTi genes can play a central role in phenotypic variation throughput the plant lifecycle. A prime example for this is found in Brassica napus, a phenotypically and genetically diverse species with enormous variation in vernalisation requirement and flowering traits. The species includes oilseed rape (canola), one of the most important oilseed crops worldwide. Previously we have identified QTL clusters related to plant development, seed yield and heterosis in winter oilseed rape that seem to be conserved in diverse genetic backgrounds. We suspect that these QTL are controlled by global regulatory genes that influence numerous traits at different developmental stages. Interestingly, many of the QTL clusters for yield and biomass heterosis appear to correspond to the positions of meta-QTL for FTi in spring-type and/or winter-type B. napus. Based on the hypothesis that diversity in FTi genes has a key influence on plant development and yield, the aim of this study is a detailed analysis of DNA sequence variation in regulatory FTi genes in B. napus, combined with an investigation of associations between FTi gene haplotypes, developmental traits, yield components and seed yield.

Biology and Control of Stereum sanguinolentum

We investigate the biology of the economically important and wood colonizing fungus Stereum sanguinolentum. The basidiomycete Stereum sanguinolentum is a primary coloniser of fresh wounds of conifers where it causes white rot. Population structure, genetics and ecology of S. sanguinolentumare studied the ultimate goal beeing biological control of this pathogen. So far, the spatial population structure has been recorded in a windthrow and amphitallsim has been detected this reproductively very versatile species. For the future we envisage to characterize metabolites which are involved in wood discolouration and to compare strains from heartrot with wound colonizeres. Moreover, interactions with the mycoparasite Tremella encephala will be studied. The study is performed as a series of diploma/master and term papers.

Schwerpunktprogramm (SPP) 1488: Planetary Magnetism (PlanetMag), Probing the Earth's subdecadal core-mantle dynamics based on satellite geomagnetic field models

The CHAMP mission provided a great amount of geomagnetic data all over the globe from 2000 to 2010. Its dense data coverage has allowed us to build GRIMM - GFZ Reference Internal Magnetic Model - which has the highest ever resolution for the core field in both space and time. We have already modeled the fluid flow in the Earth's outer core by applying the diffusionless magnetic induction equation to the latest version of GRIMM, to find that the flow evolves on subdecadal timescales, with a remarkable correlation to the observed fluctuation of Earth rotation. These flow models corroborated the presence of six-year torsional oscillations in the outer core fluid. Torsional oscillation (TO) is a type of hydromagnetic wave, theoretically considered to form the most important element of decadal or subdecadal core dynamics. It consists of relative azimuthal rotations of rigid fluid annuli coaxial with the mantle's rotation and dynamically coupled with the mantle and inner core. In preceding works, the TOs have been studied by numerical simulations, either with full numerical dynamos, or solving eigenvalue problems ideally representing the TO system. While these studies drew insights about dynamical aspects of the modeled TOs, they did not directly take into account the observations of geomagnetic field and Earth rotation. Particularly, there have been no observation-based studies for the TO using satellite magnetic data or models. In the proposed project, we aim at revealing the subdecadal dynamics and energetics of the Earth's core-mantle system on the basis of satellite magnetic observations. To that end, we will carry out four work packages (1) to (4), for all of which we use GRIMM. (1) We perform timeseries analyses of core field and flow models, to carefully extract the signals from TOs at different latitudes. (2) We refine the conventional flow modeling scheme by parameterizing the magnetic diffusion at the core surface. Here, the diffusion term is reinstated in the magnetic induction equation, which is dynamically constrained by relating it to the Lorentz term in the Navier-stokes equation. (3) We develop a method to compute the electromagnetic core-mantle coupling torque on the core fluid annuli, whereby the energy dissipation due to the Joule heating is evaluated for each annulus. This analysis would provide insights on whether the Earth's TOs are free or forced oscillations. (4) Bringing together physical implications and computational tools obtained by (1) to (3), we finally construct a dynamical model for the Earth's TOs and core-mantle coupling such that they are consistent with GRIMM and Earth rotation observation. This modeling is unique in that the force balances concerning the TOs are investigated in time domain, as well as that the modeling also aims at improving the observation-based core flow model by considering the core dynamics.

Die Auswirkung extremer Schmelzereignisse auf die zukünftige Massenbilanz des grönländischen Eisschildes

Im letzten Jahrzehnt war der grönländische Eisschild mehreren Extremereignissen ausgesetzt, mit teils unerwartet starken Auswirkungen auf die Oberflächenmassebilanz und den Eisfluss, insbesondere in den Jahren 2010, 2012 und 2015. Einige dieser Schmelzereignisse prägten sich eher lokal aus (wie in 2015), während andere fast die gesamte Eisfläche bedeckten (wie in 2010).Mit fortschreitendem Klimawandel ist zu erwarten, dass extreme Schmelzereignisse häufiger auftreten und sich verstärken bzw. länger anhalten. Bisherige Projektionen des Eisverlustes von Grönland basieren jedoch typischerweise auf Szenarien, die nur allmähliche Veränderungen des Klimas berücksichtigen, z.B. in den Representative Concentration Pathways (RCPs), wie sie im letzten IPCC-Bericht genutzt wurden. In aktuellen Projektionen werden extreme Schmelzereignisse im Allgemeinen unterschätzt - und welche Konsequenzen dies für den zukünftigen Meeresspiegelanstieg hat, bleibt eine offene Forschungsfrage.Ziel des vorgeschlagenen Projektes ist es, die Auswirkungen extremer Schmelzereignisse auf die zukünftige Entwicklung des grönländischen Eisschildes zu untersuchen. Dabei werden die unmittelbaren und dauerhaften Auswirkungen auf die Oberflächenmassenbilanz und die Eisdynamik bestimmt und somit die Beiträge zum Meeresspiegelanstieg quantifiziert. In dem Forschungsprojekt planen wir zudem, kritische Schwellenwerte in der Häufigkeit, Intensität sowie Dauer von Extremereignissen zu identifizieren, die - sobald sie einmal überschritten sind - eine großräumige Änderung in der Eisdynamik auslösen könnten.Zu diesem Zweck werden wir die dynamische Reaktion des grönländischen Eisschilds in einer Reihe von Klimaszenarien untersuchen, in denen extreme Schmelzereignisse mit unterschiedlicher Wahrscheinlichkeit zu bestimmten Zeitpunkten auftreten, und die Dauer und Stärke prognostisch variiert werden. Um indirekte Effekte durch verstärktes submarines Schmelzen hierbei berücksichtigen zu können, werden wir das etablierte Parallel Ice Sheet Model (PISM) mit dem Linearen Plume-Modell (LPM) koppeln. Das LPM berechnet das turbulente submarine Schmelzen aufgrund von Veränderungen der Meerestemperatur und des subglazialen Ausflusses. Es ist numerisch sehr effizient, so dass das gekoppelte PISM-LPM Modell Ensemble-Läufe mit hoher Auflösung ermöglicht. Folglich kann eine breite Palette von Modellparametern und Klimaszenarien in Zukunftsprojektionen in Betracht gezogen werden.Mit dem interaktiv gekoppelten Modell PISM-LPM werden wir den Beitrag Grönlands zum Meeresspiegelanstieg im 21. Jahrhundert bestimmen, unter Berücksichtigung regionaler Veränderungen von Niederschlag, Oberflächen- und Meerestemperaturen, und insbesondere der Auswirkungen von Extremereignissen. Ein Hauptergebnis wird eine Risikokarte sein, die aufzeigt, in welchen kritischen Regionen Grönlands zukünftige extreme Schmelzereignisse den stärksten Eisverlust zur Folge hätten.

Ecological-physical linkages in fluvial eco-hydromorphology

Recent discussions on the path eco-hydromorphic research has followed in the past decades highlight the need for greater ecological input into this field. Traditional approaches have been criticized for being largely correlation-based (Vaughan et al., 2009) ecological black boxes (Leclerc, 2005) and strongly relying on weak, disproven and/or outdated assumptions about the dynamics of stream biota (Lancaster & Downes, 2010). In recognition of this, process-oriented research aiming at elucidating and quantifying causal mechanisms has been proposed as a promising approach, though challenging, to study the relations between flow, morphodynamics and biological populations in running waters. In terms of levels of biological organization, it has been recognized that processes determining the response of aquatic biota to hydromorphological alteration occur mainly at the population level. In this sense, relating demographic rates to flow and morphology seems to offer great potential for progress (Lancaster & Downes, 2010). Thus, tapping into existing ecological knowledge (e.g., key patch approach for habitat networks, Verboom et al. 2001; metapopulation theory, Levins 1970; Hanski & Gaggiotti 2004, landscape-scale estimations of habitat suitability and carrying capacity, Reijnen et al. 1995; Duel et al. 1995 2003; population-level viability estimations; Akçakaya 2001; resource utilization scales, ONeill et al. 1988; habitat-use patterns, Milne et al. 1989) in order to link ecology to hydromorphology at a more fundamental level constitutes an important path towards better science and management.

AZV Project West Greenland

The AZV (Altitudinal Zonation of Vegetation) Project was initiated in the year 2002. On the basis of a detailed regional study in continental West Greenland the knowledge about altitudinal vegetation zonation in the Arctic is aimed to be enhanced. The main objectives of the project are: a) considering the regional study: characterize mountain vegetation with regard to flora, vegetation types, vegetation pattern and habitat conditions, investigate the differentiation of these vegetation characteristics along the altitudinal gradient, develop concepts about altitudinal indicator values of species and plant communities, extract suitable characteristics for the distinction and delimitation of vegetation belts, assess altitudinal borderlines of vegetation belts in the study area. b) considering generalizations: test the validity of the altitudinal zonation hypothesis of the Circumpolar Arctic Vegetation Map ( CAVM Team 2003), find important determinants of altitudinal vegetation zonation in the Arctic, develop a first small scale vegetation map of entire continental West Greenland. Field work consists of vegetational surveys according to the Braun-Blanquet approach, transect studies, soil analyses, long-time-measurements of temperature on the soil surface and vegetation mapping in three different altitudinal vegetation belts (up to 1070 m a.s.l.).

Schwerpunktprogramm (SPP) 1315: Biogeochemische Grenzflächen in Böden; Biogeochemical Interfaces in Soil, The detritusphere as the biogeochemical interface for bacterial and fungal degradation of MCPA

The detritusphere is an excellent model to study microbial-physicochemical interactions during degradation of the herbicide MCPA. Whereas during the first phase of SPP 1315 we focused on bacterial and fungal abundance at the soil litter interface and carbon flow between different compartments, the second phase will be devoted to elucidating complex regulation mechanisms of MCPA degradation in the detritusphere: (1) At the cellular level, co-substrate availability and laccase abundance might be important regulators, (2) at the community level, bacteria harbouring different classes of tfdA genes might control degradation of MCPA and (3) at the microhabitat level, interaction between MCPA degraders and organo-mineral surfaces as well as transport processes might be important regulators. The concept of hierarchical regulation of MCPA degradation will be included into the modelling of small-scale microbial growth, MCPA transport and MCPA degradation near the soil-litter interface.

Kilimanjaro Glaciers (East Africa)

The Tropical Glaciology Group's research on Kilimanjaro started in 2002 and is in progress. Central aspects of our research plan are: 1) Development of the working hypothesis: From a synopsis of (i) proxy data indicating changes in East African climate since ca. 1850, (ii) 20th century instrumental data (temperature and precipitation), and (iii) the observations and interpretations made during two periods of fieldwork (June 2001 and July 2002) a scenario of modern glacier retreat on Kibo is reconstructed. This scenario offers the working hypothesis for our project. 2) Impact of local climate on the glaciers: This goal involves micrometeorological measurements on the glaciers, and the application of collected data to full glacier energy and mass balance models. These models quantify the impact of local climate on a glacier, based on pure physical system knowledge. Our models are validated by measured mass loss and surface temperature. 3) Latest Extent of the Kilimanjaro glaciers: Here, a satellite image was analyzed to derive the surface area and spatial distribution of glaciers on Kilimanjaro in February 2003. To validate this approach, an aerial flight was conducted in July 2005. 4) Linking local climate to large-scale circulation: As glacier behavior on Kilimanjaro, a totally free-standing mountain, is likely to reflect changes in larger-scale climate, this goal explores the large-scale climate mechanisms driving local Kilimanjaro climate. Well known large-scale forcings of east African climate are sea surface temperature variations in the Pacific and, more important, in the Indian Ocean. 5) Regional modification of large-scale circulation: The regional precipitation response in East Africa due to large-scale forcing is not adequately resolved in a global climate model as used in 4). Thus, mesoscale model experiments with the numerical atmospheric model RAMS will be conducted within this goal. They are thought to reveal the modification of atmospheric flow by the Kilimanjaro massif on a regional scale. 6) Practical aspects: Based on micro- and mesoscale results, (i) how much water is provided by glaciers, (ii) providing future projections of glacier behavior as basis for economic and societal studies (practical part), e.g., for studies on the impact of vanishing glaciers on Kibo's touristic appeal, and (iii) which impact does deforestation on the Kilimanjaro slopes have on summit climate? Referring to item 2), two new automatic weather stations have been installed in February 2005. They complete a station operated by Massachusetts University on the surface of the Northern Icefield since 2000.

Adaptations and counter-adaptations in the coevolutionary arms race of a baculovirus and its insect host

Cydia pomonella granulovirus (CpGV, Baculoviridae) is one of the most important agents for the control of codling moth (CM, Cydia pomonella, L.) in both biological and integrated pest management. The rapid emergence of resistance against CpGV-M, which was observed in about 40 European CM field populations from 2003 on, could be traced back to a single, dominant, sex-linked gene. Since then, resistance management has been based on mixtures of new CpGV isolates (CpGV-I12, -S), which are able to overcome this resistance. Recently, resistance even to these novel isolates was observed in CM field populations. This resistance does not follow the described dominant, sex-linked inheritance trait. At the same time, another isolate CpGV-V15 was identified showing high virulence against these resistant populations. To elucidate this novel resistance mechanism and to identify the resistance gene(s) involved, we propose a comprehensive analysis of this resistance on the cellular and genomic level of codling moth. Because of the lack of previous knowledge of the molecular mechanisms of virus resistance in insects, several different and complementary approaches will be pursued. This study will not only give an in-depth insight into the genetic possibilities for development of baculovirus resistance in CM field populations and how the virus overcomes it, but can also serve as an important model for other baculovirus-host interaction systems.

Unraveling the genetic architecture of winter hardiness and quality traits in durum by genome wide and canidate gene based association mapping

Durum wheat is mainly grown as a summer crop. An introduction of a winter form failed until now due to the difficulty to combine winter hardiness with required process quality. Winter hardiness is a complex trait, but in most regions the frost tolerance is decisive. Thereby a major QTL, which was found in T. monococcum, T.aestivum, H. vulgare and S.cereale on chromosome 5, seems especially important. With genotyping by sequencing it is now possible to make association mapping based on very high dense marker maps, which delivers new possibilities to detect main and epistatic effects. Furthermore, new sequencing techniques allow candidate gene based association mapping. The main aim of the project is to unravel the genetic architecture of frost tolerance and quality traits in durum. Thereby, the objectives are to (1) determine the genetic variance, heritability and correlations among frost tolerance and quality traits, (2) examine linkage disequilibrium and population structure, (3) investigate sequence polymorphism at candidate genes for frost tolerance, and (4) perform candidate gene based and genome wide association mapping.

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