Introduction: In Malaysia, excessive nutrients from livestock waste management systems are currently released to the environment. Particularly, large amounts of manure from intensive pig production areas are being excreted daily and are not being fully utilised. Alternatively, the excess manure can be applied as an organic fertiliser source in neighbouring cropping systems on the small landholdings of the pig farms to improve soil fertility so that its nutrients will be available for crop uptake instead of being discharged into water streams. Thus, there is a need for better tools to analyse the present situation, to evaluate and monitor alternative livestock production systems and manure management scenarios, and to support farmers in the proper management of manure and fertiliser application. Such tools are essential to quantify, and assess nutrient fluxes, manure quality and content, manure storage and application rate to the land as well as its environmental effects. Several computer models of animal waste management systems to assist producers and authorities are now available. However, it is felt that more development is needed to adopt such models to the humid tropics and conditions of Malaysia and other developing countries in the region. Objectives: The aim is to develop a novel model to evaluate nutrient emission scenarios and the impact of livestock waste at the landscape or regional level in humid tropics. The study will link and improve existing models to evaluate emission of N to the atmosphere, and leaching of nutrients to groundwater and surface water. The simulation outputs of the models will be integrated with a GIS spatial analysis to model the distribution of nutrient emission, leaching and appropriate manure application on neighbouring crop lands and as an information and decision support tool for the relevant users.
Outbreaks of foodborne illness linked to consumptions of fresh, or partially processed, agricultural products are a growing concern in industrialized and developing countries. The incidence of human pathogens on fresh fruits and vegetables is often related to the use of recycled wastewaster in surface irrigation as well as high amounts of animal manure in agricultural management practice. Thereby the soil inhabiting fauna plays an important role in the transport and dissemination of microorganisms. The focus of the proposed project is on nematodes, well known vectors for bacteria and viruses in soil. The major goals are to: (1) survey human pathogens in soil and on/in free-living and plant parasitic nematodes in agriculture field sites irrigated with recycled wastewater or fertilized with fresh animal manure in Israel and the Palestinian Authority, (2) assess the function of nematodes as vectors in transmitting bacteria from microbial hot spots to plants, and (3) localize bacteria on and/or within the nematode and identify bacterial factors required for survival in the nematode host. Understanding the mechanisms involved in dissemination of human pathogens by nematodes will enhance the ability to develop practical means to minimize contamination of fresh produce and increase safety in food production.
We consider clay minerals, iron oxides and charcoal as major components controlling the formation of interfaces relevant for sorption of organic chemicals, as they control the assemblage of organic matter and mineral particles. We studied the formation of interfaces in batch incubation experiments with inoculated artificial soils consisting of model compounds (clay minerals, iron oxide, char) and natural soil samples. Results show a relevant contribution of both iron oxides and clay minerals to the formation of organic matter as sorptive interfaces for hydrophobic compounds. Thus, we intend to focus our work in the second phase on the characterization of the interface as formed by organic matter associated with clay minerals and iron oxides. The interfaces will be characterized by the BET-N2 and ethylene glycol monoethyl ether (EGME) methods and 129Xe and 13C NMR spectroscopy for determination of specific surface area, sorptive domains in the organic matter and microporosity. A major step forward is expected by the analysis of the composition of the interface at different resolution by reflected-light microscopy (mm scale), SEM (scanning electron microscopy, micrometer scale) and secondary ion mass spectrometry at the nanometer scale (nanoSIMS). The outcomes obtained in combination with findings from cooperation partners will help to unravel the contribution of different types of soil components on the formation and characteristics of the biogeochemical interfaces and their effect on organic chemical sorption.
It is well established that reduced supply of fresh organic matter, interactions of organic matter with mineral phases and spatial inaccessibility affect C stocks in subsoils. However, quantitative information required for a better understanding of the contribution of each of the different processes to C sequestration in subsoils and for improvements of subsoil C models is scarce. The same is true for the main controlling factors of the decomposition rates of soil organic matter in subsoils. Moreover, information on spatial variabilities of different properties in the subsoil is rare. The few studies available which couple near and middle infrared spectroscopy (NIRS/MIRS) with geostatistical approaches indicate a potential for the creation of spatial maps which may show hot spots with increased biological activities in the soil profile and their effects on the distribution of C contents. Objectives are (i) to determine the mean residence time of subsoil C in different fractions by applying fractionation procedures in combination with 14C measurements; (ii) to study the effects of water content, input of 13C-labelled roots and dissolved organic matter and spatial inaccessibility on C turnover in an automatic microcosm system; (iii) to determine general soil properties and soil biological and chemical characteristics using NIRS and MIRS, and (iv) to extrapolate the measured and estimated soil properties to the vertical profiles by using different spatial interpolation techniques. For the NIRS/MIRS applications, sample pretreatment (air-dried vs. freeze-dried samples) and calibration procedures (a modified partial least square (MPLS) approach vs. a genetic algorithm coupled with MPLS or PLS) will be optimized. We hypothesize that the combined application of chemical fractionation in combination with 14C measurements and the results of the incubation experiments will give the pool sizes of passive, intermediate, labile and very labile C and N and the mean residence times of labile and very labile C and N. These results will make it possible to initialize the new quantitative model to be developed by subproject PC. Additionally, we hypothesize that the sample pretreatment 'freeze-drying' will be more useful for the estimation of soil biological characteristics than air-drying. The GA-MPLS and GA-PLS approaches are expected to give better estimates of the soil characteristics than the MPLS and PLS approaches. The spatial maps for the different subsoil characteristics in combination with the spatial maps of temperature and water contents will presumably enable us to explain the spatial heterogeneity of C contents.
Rain-cracking limits the production of many soft and fleshy fruit including sweet cherries world wide. Cracking is thought to result from increased water uptake through surface and pedicel. Water uptake increases fruit volume, and hence, turgor of cells (Pcell) and the pressure inside the fruit (Pfruit) and subjects the skin to tangential stress and hence, strain. When the strain exceeds the limits of extensibility the fruit cracks. This hypothesis is referred to as the Pfruit driven strain cracking. Based on this hypothesis cracking is related to two independent groups of factors: (1) water transport characteristics and (2) the intrinsic cracking susceptibility of the fruit defined as the amount of cracking per unit water uptake. The intrinsic cracking susceptibility thus reflects the mechanical constitution of the fruit. Most studies focussed on water transport through the fruit surface (factors 1), but only little information is available on the mechanical constitution (i.e., Pfruit and Pcell, tensile properties such as fracture strain, fracture pressure and modulus of elasticity of the exocarp; factors 2). The few published estimates of Pfruit in sweet cherry are all obtained indirectly (calculated from fruit water potential and osmotic potentials of juice extracts) and unrealistically high. They exceed those measured by pressure probe techniques in mature grape berry by several orders of magnitude. The objective of the proposed project is to test the hypothesis of the Pfruit driven strain cracking. Initially we will focus on establishing systems of widely differing intrinsic cracking susceptibility by varying species (sweet and sour cherry, Ribes and Vaccinium berries, plum, tomato), genotype (within sweet cherry), stage of development and temperature. These systems will then be used for testing the hypothesis of Pfruit driven strain cracking. We will quantify Pfruit und Pcell by pressure probe techniques and compression tests and the mechanical properties of the exocarp using biaxial tensile tests. When the presence of high Pfruit and Pcell is confirmed by direct measurements, subsequent studies will focus on the mode of failure of the exocarp (fracture along vs. across cell walls) and the relationship between failure thresholds and morphometric characteristics of the exocarp. However, when Pfruit und Pcell are low, the hypothesis of Pfruit driven strain cracking must be rejected and the mechanistic basis for low pressures (presence of apoplastic solutes) clarified on a temporal (in the course of development) and a spatial scale (exocarp vs. mesocarp). We focus on sweet cherry, because detailed information on this species and experience in extending the short harvest period is available. Where appropriate, other cracking susceptible species (sour cherry, plum, Vaccinium, Ribes, tomato) will be included to further extend the experimental period and to maximize the range in intrinsic cracking susceptibility.
In many plant species, FLOWERING LOCUS T and related proteins are the mobile signal that communicates information on photoperiod from the leaves to the shoots, where the transition to flowering is realized. FT expression is tightly controlled at the transcriptional level so that it is restricted to leaves, occurs only in appropriate photoperiods, and integrates ambient temperature and developmental cues, as well as information on biotic and abiotic stress. We previously established that FT transcription in the model plant Arabidopsis thaliana requires proximal promoter cis-elements and a distal enhancer, both evolutionary conserved among Brassicacea species. In addition, FT transcription is blocked prior vernalization in biannual accessions and vernalization-dependency of FT is controlled through a CArG-box located in the first intron that binds the transcriptional repressor FLOWERING LOCUS C (FLC). Chromatin-mediated repression by the Polycomb Group (PcG) pathway is required for photoperiod-dependent FT regulation and participates in FT expression level modulation in response to other cues.In this project, I propose to explore the available sequence data from the 1001 genome project in Arabidopsis to evaluate how often changes in regulatory cis-elements at FT have occurred and how these translate into an adaptive value. Allele-specific FT expression pattern will be measured in F1 hybrids of different accessions in response to varying environmental conditions. FT alleles that show cis-regulatory variation will be further analyzed to pinpoint the causal regulatory changes and study their effect in more detail. The allotetrapolyploid species Brassica napus is a hybrid of two Brassiceae species belonging to the A- and C-type genome, which are in turn mesopolyploid due to a genome triplication that occurred ca. 10x106 years ago. We will determine allele-specific expression of FT paralogs from both genomes of a collection of B. napus accessions. The plants will be grown in the field in changing environmental conditions to maximize the chance to detect expression variation of the paralogs. We will compare the contribution of the founder genomes to the regulation of flowering time and asses variation in this contribution. A particular focus will be to study the impact of chromatin-mediated repression on allele selection in B. napus.
Das hier vorgeschlagene Projekt, RP6 in INUIT-2, zielt darauf hin, fundamentales Prozessverständnis in Bezug auf heterogene Eisnukleation zu erzielen, und hier besonders auf die Rolle von biogenen Eiskeimen und von Eiskeimen die aus Mischungen von biogenem und mineralischem Material bestehen. Der Leipzig Aerosol Cloud Interaction Simulator (LACIS) wird dazu verwendet werden, das Immersionsgefrierverhalten einer Reihe von verschiedenen Eiskeimen zu untersuchen, darunter biogene (von Pilzen stammende) Eiskeime, solche die aus einer Mischung von biogenem und mineralischem Material bestehen wie Bodenstäube und Proben die innerhalb von INUIT-2 als Test-Materialen verwendet werden. Letztere werden von verschiedenen Gruppen von innerhalb und außerhalb von INUIT vermessen werden, und die Ergebnisse werden Vergleichen unterzogen werden, ähnlich denen, die bereits für einfachere Test-Materialien in INUIT-1 erfolgreich durchgeführt worden sind. Für die Eiskeime, die zur Untersuchung in RP6 vorgeschlagen werden, wird in sinnvollen und machbaren Fallen eine Oberflächenbehandlung durchgeführt werden, mit reaktiven und mit chemisch inerten Substanzen, deren Einfluss auf die Eiskeimfähigkeit dann untersucht wird. Wie bereits in früheren LACISStudien dokumentiert, sind kontrollierte Oberflächenbehandlungen ein ausgezeichnetes Instrument um zu ermitteln, was dazu führt, dass ein Partikel ein effektiver Eiskeim ist. Zusätzlich erhellen diese Untersuchungen den Effekt der Alterung auf die Eiskeime. Es ist auch geplant, die Messungen auszuweiten, hin zu Bedingungen unter denen eine Untersättigung bezüglich Wasserdampf vorliegt. Es soll untersucht werden in wie weit sich die Eiskeimbildung unter diesen Bedingungen verhält wie es im Fall von Immersionsgefrieren in konzentrierten Lösungen zu erwarten wäre. Von all den experimentell erhaltenen Daten werden verschiedene Parametrisierungen abgeleitet, sowohl zeit-abhängige als auch zeit-unabhängige, die dann der Wissenschaftsgemeinschaft für die weitere Verwendung in Modellen zur Verfügung gestellt werden. Die hier vorgeschlagenen Studien werden die bereits erfolgreich an LACIS während INUIT-1 durchgeführten Arbeiten ergänzen, da die Arbeiten in INUIT-1 stärker auf die Untersuchung reiner Mineralstäube und reiner biogener Substanzen hinzielten. Die Untersuchung von komplexeren und entsprechend mehr atmosphärenrelevanten Eiskeimen wird signifikant dazu beisteuern, atmosphärische Eiskeimbildung generell besser zu verstehen, und die entsprechenden Beiträge von mineralischen und biogenen Substanzen zu quantifizieren.
Whether primordial bodies in the solar system possessed internally-generated dynamos is a fundamental constraint to understand the dynamics and timing of early planetary formation. Paleointensity studies on several meteorites reveal that their host planets possessed magnetic fields within an order-of magnitude of the present Earths field. Interpretation of paleointensity data relies heavily on fundamental knowledge of the magnetic properties of the magnetic carriers, such as the single to multidomain size threshold or how the saturation magnetization varies as a function of grain size, yet very little knowledge exists about these key parameters for some of the main magnetic recorders in meteorites: the iron-nickel alloys. Moreover, most meteorites have experienced some amount of shock during their histories, yet the consequence of even very small stresses on paleointensity data is poorly known.We wish to fill these gaps by magnetically characterizing Fe-Ni alloys as a function of grain size and by determining how absolute and relative paleointensity data are biased by strain levels lower than those petrologically observable (less than 4-5 GPa). For example, our preliminary work shows that an imposed stress of 0.6 GPa will reduce absolute paleointensity estimates by 46Prozent for single domain magnetite-bearing rocks. In general, paleointensity determinations possess inherent disadvantages regarding measurement precision and the inordinate amount of human time investment. We intend to overcome these limitations by extending and improving our fully automated magnetic workstation known as the SushiBar.
Aktuelle wissenschaftliche Studien legen nahe, dass die aktuelle Erderwärmung durch Treibhausgasemissionen hervorgerufen wird, die vom Menschen verursacht sind. Um gegen diese Entwicklung geeignete Maßnahmen ergreifen zu können bzw. um zu überprüfen, ob solche Maßnahmen von Erfolg gekrönt sind, ist es notwendig, die Schadstoffkonzentrationen inklusive der zugehörigen Emissionsquellen genau zu kennen. Diese Informationen sind bisher jedoch sehr lückenhaft und beruhen auf sogenannten 'bottom-up' Berechnungen. Da diese Kalkulationen nicht auf direkten Messungen beruhen, weisen sie große Ungenauigkeiten auf und sind außerdem nicht in der Lage, bisher unbekannte Emissionsquellen zu identifizieren. In dem hier vorgestellten Projekt soll ein mesoskaliges Netzwerk für die Überwachung von Luftschadstoffen wie CO2, CH4, CO, NO2 und O3 aufgebaut werden, das auf dem neuartigen Konzept der differentiellen Säulenmessung beruht. Bei diesem Ansatz wird die Differenz zwischen den Luftsäulen luv- und leewärts einer Stadt gebildet. Diese Differenz ist proportional zu den emittierten Schadstoffen und somit eine Maßzahl für die Emissionen, welche in der Stadt generiert werden.Mithilfe dieser Methode wird es in Zukunft möglich sein, städtische Emissionen über lange Zeiträume hinweg zu überwachen. Damit können neue Informationen über die Generierung und Umverteilung von Luftschadstoffen gewonnen werden. Wir werden u.a. folgende zentrale Fragen beantworten: Wie verhält sich der tatsächliche Trend der CO2, CH4 und NO2 Emissionen in München über mehrere Jahre? Wo sind die Emissions-Hotspots? Wie akkurat sind die bisherigen 'bottom-up' Abschätzungen? Wie effektiv sind die Maßnahmen zur Emissionsreduzierung tatsächlich? Sind vor allem für Methan weitere Maßnahmen zur Reduzierung der Emissionen notwendig? Zu diesem Zweck werden wir ein vollautomatisiertes Messnetzwerk aufbauen und passende Methoden zur Modellierung entwickeln, welche u.a. auf STILT (Stochastic Time-Inverted Lagrangian Transport) und CFD (Computational Fluid Dynamics) basieren. Mithilfe der Modellierungsresultate werden wir eine Strategie entwerfen, wie städtische Netzwerke zur Überwachung von Luftschadstoffen aufgebaut werden müssen, um repräsentative Ergebnisse zu erhalten. Außerdem können mit den so gewonnenen städtischen Emissionszahlen z.B. dem Stadtreferat, den Stadtwerken München oder der Bayerischen Staatsregierung Möglichkeiten zur Beurteilung der Effektivität der angewandten Klimaschutzmaßnahmen an die Hand gegeben werden. Das hier vorgestellte Messnetzwerk dient somit als Prototyp, um die grundlegenden Fragen zum Aufbau eines solchen Sensornetzwerks zu klären, damit objektive Aussagen zu städtischen Emissionen möglich werden. Dieses Projekt ist weltweit einmalig und wird zukunftsweisende Ergebnisse liefern.
The goal of this project is to capture and analyse fluctuations of the fresh water in the western Nordic Seas and to understand the related processes. The East Greenland Current in the Nordic Seas constitutes an important conduit for fresh water exiting the Arctic Ocean towards the North Atlantic. The Arctic Ocean receives huge amounts of fresh water by continental runoff and by import from the Pacific Ocean. Within the Arctic Ocean fresh water is concentrated at the surface through sea ice formation. The East Greenland Current carries this fresh water in variable fractions as sea ice and in liquid form; part of it enters the central Nordic Seas, via branching of the current and through eddies. It controls the intensity of deep water formation and dilutes the water masses which result from convection. The last decades showed significant changes of the fresh water yield and distribution in the Nordic Seas and such anomalies were found to circulate through the North Atlantic. In this project the fresh water inventory, its spatial distribution and its pathways between the East Greenland Current and the interior Greenland and Icelandic seas shall be captured by autonomous glider missions. The new measurements and existing data will, in combination with the modeling work of the research group, serve as basis for understanding the causes of the fresh water variability and their consequences for the North Atlantic circulation and deep water formation.
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