Boron (B) is an essential microelement for plants. Despite the use of modern fertilization methods, B deficiency still causes losses in agricultural plant production. Even though many positive effects of B on plant growth and physiology have been reported, a large majority of B functions and the regulatory mechanisms controlling the B nutritional status remain unknown. The main objective of this project is to elucidate how the greatly B deficiency-sensitive Brassica crop plants process and regulate their B status during vegetative and reproductive growth. In this context, the project aims at identifying the mode of action of B in mechanisms regulating the B status itself and uncovering those mechanisms contributing to B efficiency in different genotypes. Plant species subjected to investigation will be the agronomically important oilseed and vegetable plant Brassica napus (rapeseed) and its close relative the genetic and molecular model plant Arabidopsis thaliana. Questions addressed within the scope of this project should lead to a detailed understanding of mechanisms controlling B uptake and allocation from the level of the whole plant down to the cellular level. B transport routes and rates will be determined in sink- and source tissues and in developmental periods with a particularly high B demand. A special focus will be on the identification of B transport bottlenecks and the analysis of B deficiency-sensitive transport processes to and within the highly B-demanding reproductive organs. Recent studies in Arabidopsis suggest that Nodulin26-like Intrinsic Proteins (NIPs), which belong to the aquaporin channel protein family, are essential for plant B uptake and distribution. The systematic focus on the molecular and physiological characterization of B. napus NIPs will clarify their role in B transport and will identify novel NIP-associated mechanisms playing key roles in the B response network.To further resolve the mostly unknown impact of the B nutritional status on gene regulation and metabolism, a transcript and metabolite profile of B-sufficient and B-deficient rapeseed plants will be generated. Additionally, an Arabidopsis transcription factor knockout collection (greater 300 lines) will be screened for abnormalities in responses to the B nutritional status. This will identify yet unknown B-responsive genes (transcription factors and their targets) and gene products (enzymes or metabolite variations) playing key roles in signalling pathways and mechanisms regulating the B homeostasis. Boron (in form of boric acid) and arsenite (As) share in all likelihood the same NIP-mediated transport pathways. To assess the consequences of this dual transport pathway the so far unstudied impact of the plants B nutritional status on the accumulation and distribution of As will be investigated in B. napus. Moreover, the current dimension of the As contamination of Brassica-based food products, to which consumers are exposed to, will be analyzed. usw.
Outbreaks of foodborne illness linked to consumptions of fresh, or partially processed, agricultural products are a growing concern in industrialized and developing countries. The incidence of human pathogens on fresh fruits and vegetables is often related to the use of recycled wastewaster in surface irrigation as well as high amounts of animal manure in agricultural management practice. Thereby the soil inhabiting fauna plays an important role in the transport and dissemination of microorganisms. The focus of the proposed project is on nematodes, well known vectors for bacteria and viruses in soil. The major goals are to: (1) survey human pathogens in soil and on/in free-living and plant parasitic nematodes in agriculture field sites irrigated with recycled wastewater or fertilized with fresh animal manure in Israel and the Palestinian Authority, (2) assess the function of nematodes as vectors in transmitting bacteria from microbial hot spots to plants, and (3) localize bacteria on and/or within the nematode and identify bacterial factors required for survival in the nematode host. Understanding the mechanisms involved in dissemination of human pathogens by nematodes will enhance the ability to develop practical means to minimize contamination of fresh produce and increase safety in food production.
The project aims at achieving a better understanding of the processes that drive or limit the response of grassland systems in a world of increasing atmospheric pCO2. We will test the hypothesis that the previously shown increase in below-ground allocation of C under elevated pCO2 provides the necessary energy excess and will stimulate free-living N2 fixers in a low N grassland environment. The project thus aims at assessing the occurrence and importance of free-living N2 fixers under elevated pCO2 and identify the associated microbial communities involved in order to better understand ecosystems response and sustainability of grassland systems. This project had the last opportunity to obtain soil samples from a grassland ecosystem adapted to long-term (10 year) elevated atmospheric pCO2 as the Swiss FACE experiment. The project aims to identify the relevant components of free-living diazotrophs of the microbial community using 15N stable isotope - DNA probing.
To overcome the limitation in spatial and temporal resolution of methane oceanic measurements, sensors are needed that can autonomously detect CH4-concentrations over longer periods of time. The proposed project is aimed at:- Designing molecular receptors for methane recognition (cryptophane-A and -111) and synthesizing new compounds allowing their introduction in polymeric structure (Task 1; LC, France); - Adapting, calibrating and validating the 2 available optical technologies, one of which serves as the reference sensor, for the in-situ detection and measurements of CH4 in the marine environments (Task 2 and 3; GET, LAAS-OSE, IOW) Boulart et al. (2008) showed that a polymeric filmchanges its bulk refractive index when methane docks on to cryptophane-A supra-molecules that are mixed in to the polymeric film. It is the occurrence of methane in solution, which changes either the refractive index measured with high resolution Surface Plasmon Resonance (SPR; Chinowsky et al., 2003; Boulart et al, 2012b) or the transmitted power measured with differential fiber-optic refractometer (Boulart et al., 2012a; Aouba et al., 2012).- Using the developed sensors for the study of the CH4 cycle in relevant oceanic environment (the GODESS station in the Baltic Sea, Task 4 and 5; IOW, GET); GODESS registers a number of parameters with high temporal and vertical resolution by conducting up to 200 vertical profiles over 3 months deployment with a profiling platform hosting the sensor suite. - Quantifying methane fluxes to the atmosphere (Task 6); clearly, the current project, which aims at developing in-situ aqueous gas sensors, provides the technological tool to achieve the implementation of ocean observatories for CH4. The aim is to bring the fiber-optic methane sensor on the TRL (Technology Readiness Level) from their current Level 3 (Analytical and laboratory studies to validate analytical predictions) - to the Levels 5 and 6 (Component and/or basic sub-system technology validation in relevant sensing environments) and compare it to the SPR methane sensor, taken as the reference sensor (current TRL 5). This would lead to potential patent applications before further tests and commercialization. This will be achieved by the ensemble competences and contributions from the proposed consortium in this project.
Ozeanerwärmung, -versauerung und die Umweltverschmutzung, nehmen zunehmend Einfluss auf die arktische und antarktische Umwelt. Antarktische, stenothermen Fische haben sich evolutionär an die dortigen stabilen Umweltbedingungen angepasst, welche z.B. genetische und funktionellen Veränderungen beinhalten. Diese könnten u.a. die Anpassungsmöglichkeiten antarktischer Fische gegenüber Umweltveränderungen beeinträchtigen. Vergleichsweise dazu leben arktische, gadoide Fische in einem Gebiet mir größeren Umweltschwankungen. In Anbetracht desen wird sich die Klimaveränderung wahrscheinlich unterschiedlich auf Arktische und Antarktische Fische auswirken.Das Herz-Kreislaufsystems stenothermer Fischarten ist prinzipiell nur geringfügig auf Umweltveränderungen zu reagieren. Hierbei stellt die Herzfunktion einen Schlüsselfaktor dar. Studien deuten des Weiteren auf negative und interagierende Einflüsse von Ozeanerwärmung- und versauerung auf Embryos und Larvalen polarer Fischarten hin. Die Exposition der Fische gegenüber mehreren, kombinierten Umweltstressoren kann zudem zu Verschiebungen im Energiehaushalt führen. Diese können eine verringerte Energieverfügbarkeit für andere, lebensnotwendige Funktionen zur Folge haben.Der Antrag befasst sich mit der Frage, wie sich die Umweltstressoren anthropogene Umweltverschmutzung, Klimaerwärmung und Ozeanversauerung auf den Energiestoffwechsel verschiedener Lebensstadien arktischer und antarktischer Fische auswirkt. Die Kernfragen lauten:Beeinträchtigt das Zusammenspiel multipler Stressoren den Schadstoffstoffwechsel polarer Fische? Verursachen multiple Stressoren eine Verschiebung im Energiehaushalt arktischer und antarktischer Fische? Wie beeinflussen Schadstoffe die aerobe und Herzfunktion der verschiedenen Entwicklungsstadien polarer Fische?Was für negative Folgen könnten aus ökologischer Sicht für arktische Gadoiden und antarktische Notothenioiden draus resultieren?Der Antrag soll ein grundsätzliches Verständnis für molekulare, mitochondriale, zellulare und Stoffwechselprozesse schaffen, welche der Anfälligkeit polarer Fische gegenüber Umweltstressoren zugrundeliegen. Als Maß für evolutionäre Anpassungsfähigkeit sollen die Akklimationskapazitäten der verschiedenen Lebensstadien polarer Fische untersucht werden.Für einen Breitengraden-Vergleich von Toleranzen gegenüber Umweltfaktoren konzentriert sich der Antrag auf ökologisch und biologisch vergleichbare stenotherme Arten. Somit wird eine Datengrundlage geschaffen, um die evolutionär verschiedenen aber gleichermaßen stenothermen arktische und antarktische Fische vergleichen zu können.Die in diesem Antrag eruierte physiologische Empflindlichkeit polarer Fische gegenüber Klimawandel sollen abschließend dazu dienen, die zukünftigen Risiken menschengemachter Umweltrisiken für diese Tiere abgeschätzen zu können. Schließlich wird das Projekt eine Grundlage für Management- und Schutzmaßnahmen polarer Ökosysteme gegenüber fortschreitendem globalen Wandel bilden.
In the Earth, the dynamo action is strongly linked to core freezing. There is a solid inner core, the growth of which provides a buoyancy flux that drives the dynamo. The buoyancy in this case derives from a difference in composition between the solid inner core and the fluid outer core. In planetary bodies smaller than the Earth, however, this core differentiation process may differ - Fe may precipitate at the core-mantle boundary (CMB) rather than in the center and may fall as iron snow and initially remelt with greater depth. A chemical stable sedimentation zone develops that comprises with time the entire core - at that time a solid inner core starts to grow. The dynamics of this system is not well understood and also whether it can generate a magnetic field or not. The Jovian moon Ganymede, which shows a present-day magnetic dipole field, is a candidate for which such a scenario has been suggested. We plan to study this Fe-snow regime with both a numerical and experimental approach. In the numerical study, we use a 2D/3D thermo-chemical convection model that considers crystallization and sinking of iron crystals together with the dynamics of the liquid core phase (for the 3D case the influence of the rotation of the Fe snow process is further studied).The numerical calculations will be complemented by two series of experiments: (1) investigations in metal alloys by means of X-ray radioscopy, and (2) measurements in transparent analogues by optical techniques. The experiments will examine typical features of the iron snow regime. On the one hand they will serve as a tool to validate the numerical approach and on the other hand they will yield important insight into sub-processes of the iron snow regime, which cannot be accessed within the numerical approach due to their complexity.
The present-day configuration of Indonesia and SE Asia is the results of a long history of tectonic movements, volcanisms and global eustatic sea-level changes. Not indifferent to these dynamics, fauna and flora have been evolving and dispersing following a complicate pattern of continent-sea changes to form what are today defined as Sundaland and Wallacea biogeographical regions. The modern intraannual climate of Indonesia is generally described as tropical, seasonally wet with seasonal reversals of prevailing low-level winds (Asian-Australian monsoon). However at the interannual scale a range of influences operating over varying time scales affect the local climate in respect of temporal and spatial distribution of rainfall. Vegetation generally reflects climate and to simplify it is possible to distinguish three main ecological elements in the flora of Malaysia: everwet tropical, seasonally dry tropical (monsoon) and montane. Within those major ecological groups, a wide range of specific local conditions caused a complex biogeography which has and still attract the attention of botanists and biogeographers worldwide. Being one of the richest regions in the Worlds in terms of species endemism and biodiversity, Indonesia has recently gone through intensive transformation of previously rural/natural lands for intensive agriculture (oil palm, rubber, cocoa plantations and rice fields). Climate change represents an additional stress. Projected climate changes in the region include strengthening of monsoon circulation and increase in the frequency and magnitude of extreme rainfall and drought events. The ecological consequences of these scenarios are hard to predict. Within the context of sustainable management of conservation areas and agro-landscapes, Holocene palaeoecological and palynological studies provide a valuable contribution by showing how the natural vegetation present at the location has changed as a consequence of climate variability in the long-term (e.g. the Mid-Holocene moisture maximum, the modern ENSO onset, Little Ice Age etc.). The final aim of my PhD research is to compare the Holocene history of Jambi province and Central Sulawesi. In particular: - Reconstructing past vegetation, plant diversity and climate dynamics in the two study areas Jambi (Sumatra) and Lore Lindu National Park (Sulawesi) - Comparing the ecological responses of lowland monsoon swampy rainforest (Sumatra) and everwet montane rainforests (Sulawesi) to environmental variability (vulnerability/resilience) - Investigating the history of human impact on the landscape (shifting cultivation, slash and burn, crop cultivation, rubber and palm oil plantation) - Assessing the impact and role of droughts (El Niño) and fires - Adding a historical perspective to the evaluation of current and future changes.
Der asiatische Sommermonsun ist charakterisiert durch hohe Konvektion über Südasien, die mit der asiatischen Monsun-Antizyklone (AMA) zusammenhängt, der sich von der oberen Troposphäre bis in die untere Stratosphäre (UTLS) erstreckt. Diese Antizyclone ist das ausgeprägteste Zirkulationsmuster in diesen Höhen während des borealen Sommer. Es ist bekannt, dass der Export von Monsunluft quasi-isentropisch aus der AMA sowohl im Osten als auch im Westen, einen großen Einfluss auf die Zusammensetzung der außertropischen unteren Stratosphäre hat. Jedoch sind die relative Stärken der beiden Wege bisher unbekannt. Der Transport von Luftmassen aus der AMA in die nördliche außertropische UTLS wirkt sich entscheidend auf die Chemie der Stratosphäre und ihrenStrahlungshaushalt (z.B. durch Transport von H2O, Aerosol oder ozonschädigende Stoffe) aus. Im Rahmen dieses Projekts AirExam wird der quasi-isentropischer Luftmassenexport aus der AMA durch verschiedene Wegen und seine Auswirkungen auf Chemie und Strahlung der außertropische UTLS quantifiziert durch u.a. HALO-Flugzeugmessungen (insbesondere aus die für Sommer 2023 geplanten PHILEAS-Kampagne), Simulationen mit dem Chemischen Transportmodell CLaMS und Strahlungsberechnungen. Unser Projekt AirExam wird sich mit den folgenden offenen Schlüsselfragen befassen:1) Welchen relativen Beitrag leisten die beiden quasi-horizontalen Transportwege (nach Westen und Osten) aus dem asiatischen Monsun-Antizyklon zur Zusammensetzung der außertropischen unteren Stratosphäre?2) Wie groß ist die jährliche Variabilität des Transports aus der asiatischen Monsun-Antizyklone in die außertropische untere Stratosphäre und was sind die Hauptquellenregionen auf der Erde Oberfläche?3) Was ist die Auswirkung des Wasserdampftransports aus der asiatischen Monsun-Antizyklone zum H2O-Budget der außertropischen UTLS und seine Strahlungswirkung?In unserem Projekt werden wir HALO-Messungen (insbesondere H2O) mit globalen 3-dimensionalen CLaMS-Simulationen kombinieren, die von neuen hochaufgelösten ERA-5-Reanalyse des ECMWF angetrieben werden. CLaMS-Simulationen auf der Grundlage von ERA-5 sind ein neues Instrument zur zuverlässigen Beschreibung von Transportprozessen in der Region des asiatischen Monsuns und seiner globalen Auswirkungen. Die Strahlungswirkung des durch den asiatischen Monsun verursachten H2O-Anstiegs im Sommer und Herbst wird mit Hilfe des Strahlungs-Transfercodes Edwards und Slingo berechnet. H2O ist das wichtigste Treibhausgas, und die Befeuchtung der Stratosphäre ist eine wichtige Triebkraft des Klimawandels. Unser Projekt AirExam wird die Auswirkungen des verstärkten H2O-Transports in die untere Stratosphäre quantifizieren und kann daher dazu beitragen, die potenziellen Risiken des Luftmassentransports aus der asiatischen Monsunregion auf die globale Stratosphäre zu bewerten.
Magnetic resonance tomography (MRT) on microcosm soil cores (200 mm Ø) used for CeMiX, comprising naturally stacked subsoil down to 700 mm plus topsoil from CeFiT, will be implemented at a laterally partially open Split 1.5 T magnet, with intended final in-plane spatial resolution of 200 Micro m. Three-dimensional biopore distributions and dynamics of their formation within the cores will be determined non-invasively and compared to complementing CT analyses of SP 2. One major aim is a non-invasive differentiation of the biopores into earthworm- and root system-originating ones and currently air-, water-, root- and earthwormfilled ones, based on NMR relaxation parameters. Attempts will additionally be made to classify different wall coatings of the biopores with regard to their water affinity. Dynamics of water distribution within the microcosm core and its biopore structures, starting from initial values taken from CeFiT (SP 3), will be documented with an in-plane resolution of 5 mm, in parallel to measurements of root growth dynamics for calculation of biomass and root surface area. Special emphasis will be put on the role of the plant root system for a re-distribution of water/D2O (and solutes) between different soil layers. Finally we will attempt MRT-controlled sample collection from the microcosm cores, to get - together with our research unit partners of SPs 4-8 - repeated access to minimally invasively acquired data on nutrient and microorganism distributions in concert with non-invasively collected water and root distribution data as a basis for dynamic modelling of water and solute circuits in SP 10. Beside the microcosm cores, flat rhizotrons as used in SP 3 will be employed to enable measurements of root and shoot hydrostatic pressure profiles with pressure probes, in addition to MRT measurements. In this way water distributions and corresponding driving forces and growth dynamics will be measured altogether in a minimally invasive manner.
It has been suggested that dying and decaying fine roots and root exudation represent important, if not the most important, sources of soil organic carbon (SOC) in forest soils. This may be especially true for deep-reaching roots in the subsoil, but precise data to prove this assumption are lacking. This subproject (1) examines the distribution and abundance of fine roots (greater than 2 mm diameter) and coarse roots (greater than 2 mm) in the subsoil to 240 cm depth of the three subsoil observatories in a mature European beech (Fagus sylvatica) stand, (2) quantifies the turnover of beech fine roots by direct observation (mini-rhizotron approach), (3) measures the decomposition of dead fine root mass in different soil depths, and (4) quantifies root exudation and the N-uptake potential with novel techniques under in situ conditions with the aim (i) to quantify the C flux to the SOC pool upon root death in the subsoil, (ii) to obtain a quantitative estimate of root exudation in the subsoil, and (iii) to assess the uptake activity of fine roots in the subsoil as compared to roots in the topsoil. Key methods applied are (a) the microscopic distinction between live and dead fine root mass, (b) the estimation of fine and coarse root age by the 14C bomb approach and annual ring counting in roots, (c) the direct observation of the formation and disappearance of fine roots in rhizotron tubes by sequential root imaging (CI-600 system, CID) and the calculation of root turnover, (d) the measurement of root litter decomposition using litter bags under field and controlled laboratory conditions, (e) the estimation of root N-uptake capacity by exposing intact fine roots to 15NH4+ and 15NO3- solutions, and (f) the measurement of root exudation by exposing intact fine root branches to trap solutions in cuvettes in the field and analysing for carbohydrates and amino acids by HPLC and Py-FIMS (cooperation with Prof. A. Fischer, University of Trier). The obtained data will be analysed for differences in root abundance and activity between subsoil (100-200 cm) and topsoil (0-20 cm) and will be related to soil chemical and soil biological data collected by the partner projects that may control root turnover and exudation in the subsoil. In a supplementary study, fine root biomass distribution and root turnover will also be studied at the four additional beech sites for examining root-borne C fluxes in the subsoil of beech forests under contrasting soil conditions of different geological substrates (Triassic limestone and sandstone, Quaternary sand and loess deposits).
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