In soils and sediments there is a strong coupling between local biogeochemical processes and the distribution of water, electron acceptors, acids, nutrients and pollutants. Both sides are closely related and affect each other from small scale to larger scale. Soil structures such as aggregates, roots, layers, macropores and wettability differences occurring in natural soils enhance the patchiness of these distributions. At the same time the spatial distribution and temporal dynamics of these important parameters is difficult to access. By applying non-destructive measurements it is possible to overcome these limitations. Our non-invasive fluorescence imaging technique can directly quantity distribution and changes of oxygen and pH. Similarly, the water content distribution can be visualized in situ also by optical imaging, but more precisely by neutron radiography. By applying a combined approach we will clarify the formation and architecture of interfaces induces by oxygen consumption, pH changes and water distribution. We will map and model the effects of microbial and plant root respiration for restricted oxygen supply due to locally high water saturation, in natural as well as artificial soils. Further aspects will be biologically induced pH changes, influence on fate of chemicals, and oxygen delivery from trapped gas phase.
Der Beginn der nordhemisphärischen Vereisung und die Entwicklung kontinuierlichen Permafrostes in Eurasien zwischen dem Ende des Miozäns und dem frühen Pleistozän zählt zu den bedeutendsten klimatischen Ereignissen des Känozoikums. Der Zeitpunkt extensiver Vereisung auf den Kontinenten und des Arktischen Ozeans und damit verbundene Veränderungen der klimatischen Bedingungen bleibt bislang ungenau bestimmt.Speläotheme (sekundäre Höhlenkarbonate) stellen ein wichtiges Archiv kontinentaler Umweltbedingungen dar, welches durch besonders genaue radiometrische Altersmodelle für eine grosse Bandbreite an Paläoklimaproxies charakterisiert ist.Wir konnten erfolgreich diagenetisch unveränderte und datierbare Proben aus Zentral- und Nordsibirien identifizieren und schlagen eine Multi-proxy-Studie an U/Pb-datierten Stalagmiten vor. Diese Studie wird Einblicke in die thermalen und hydrologischen Bedingungen zwischen 10.3 Ma und 8 Ma liefern. Wasser aus in den Speläothemen eingeschlossenen Fluidinklusionen wird auf seine Isotopenzusammensetzung hin untersucht. Zudem wird die in den Speläothemen beobachtete Lamination genutzt, um die Saisonalität während des Torton und Messiniums zu rekonstruieren. Wir suchen finanzielle Unterstützung für die parallele Analyse der Isotopie des Fluidinklusionswassers, der Sauerstoff- und Kohlenstoffisotopie des Karbonates, und der Elementkonzentration in den Speläothemen. Diese Kombination geochemischer Methoden wird Einblicke in regionale Umweltbedingungen, die Niederschlagshistorie und Temperaturen während des Miozäns und vor der Entwicklung kontinuierlichen Permafrostes geben. Zusätzliche Proben werden genutzt, um den Wechsel vom eisfreien zu einem durch Permafrost charakterisierten Sibirien zeitlich genauer einzugrenzen.Das vorgeschlagene Projekt wird unser Wissen zur atmosphärischen Zirkulation, und daran geknüpfter Veränderungen des Feuchte- und Temperaturregimes während eines saisonal eisfreien Arktischen Ozeans erweitern.
It has been suggested that dying and decaying fine roots and root exudation represent important, if not the most important, sources of soil organic carbon (SOC) in forest soils. This may be especially true for deep-reaching roots in the subsoil, but precise data to prove this assumption are lacking. This subproject (1) examines the distribution and abundance of fine roots (greater than 2 mm diameter) and coarse roots (greater than 2 mm) in the subsoil to 240 cm depth of the three subsoil observatories in a mature European beech (Fagus sylvatica) stand, (2) quantifies the turnover of beech fine roots by direct observation (mini-rhizotron approach), (3) measures the decomposition of dead fine root mass in different soil depths, and (4) quantifies root exudation and the N-uptake potential with novel techniques under in situ conditions with the aim (i) to quantify the C flux to the SOC pool upon root death in the subsoil, (ii) to obtain a quantitative estimate of root exudation in the subsoil, and (iii) to assess the uptake activity of fine roots in the subsoil as compared to roots in the topsoil. Key methods applied are (a) the microscopic distinction between live and dead fine root mass, (b) the estimation of fine and coarse root age by the 14C bomb approach and annual ring counting in roots, (c) the direct observation of the formation and disappearance of fine roots in rhizotron tubes by sequential root imaging (CI-600 system, CID) and the calculation of root turnover, (d) the measurement of root litter decomposition using litter bags under field and controlled laboratory conditions, (e) the estimation of root N-uptake capacity by exposing intact fine roots to 15NH4+ and 15NO3- solutions, and (f) the measurement of root exudation by exposing intact fine root branches to trap solutions in cuvettes in the field and analysing for carbohydrates and amino acids by HPLC and Py-FIMS (cooperation with Prof. A. Fischer, University of Trier). The obtained data will be analysed for differences in root abundance and activity between subsoil (100-200 cm) and topsoil (0-20 cm) and will be related to soil chemical and soil biological data collected by the partner projects that may control root turnover and exudation in the subsoil. In a supplementary study, fine root biomass distribution and root turnover will also be studied at the four additional beech sites for examining root-borne C fluxes in the subsoil of beech forests under contrasting soil conditions of different geological substrates (Triassic limestone and sandstone, Quaternary sand and loess deposits).
During the first project period we developed a general approach to quantify soil pore structure based on X-ray micro-tomography Vogel et al. (2010) which is applicable at various scales to cover soil pores larger that 0.05 mm in a representative way. Based on this method we generated equivalent network models to numerically simulate flow and transport of dissolved chemicals. The existing network model was extended to handle reactive transport and infiltration processes which are especially critical for matter flux in soil. The results were compared to experimental findings. The original research question 'what does a particle see on its way through soil' could be answered quantitatively for various boundary conditions including steady state flux and infiltration. However, we identified various critical aspects of the proposed modeling concept which will be in the focus of the second period. This includes 1) the spatial arrangement of interfaces having different quality which is crucial for chemical interactions and pore scale water dynamics, 2) the realistic multiphase dynamics at the pore scale which need to reflect the dynamic pressure and movement of trapped non-wetting phase and 3) the parametrization of structural complexity which need to be developed beyond the measurement of continuous Minkowski functions to allow the development of quantitative relations between structure and function. These aspects will be explored in a joint experiments in cooperation with partners within the SPP.
Selenium is a natural trace element that is of fundamental importance to human health. However, it is also an element with a small range between dietary deficiency (less than 40 micrograms per day) and toxic dosages (over 400 micrograms per day). The extreme geographical variation in environmental selenium concentrations has resulted in significant health problems. For example, in China, widespread serious diseases such as Kashin-Beck and Keshan disease have been related to the very low selenium contents of locally produced food. To deal with health problems related to deficient or excess levels of selenium in the environment, it is essential to get a better understanding of the processes that control the global distribution of selenium. This research project is aimed at investigating potentially important sources, pathways and sinks of natural selenium species. Two interdisciplinary work programs are planned that combine different scientific methodologies in the field of environmental biogeochemistry. One work program will focus on the production of volatile selenium species by marine phytoplankton, which could be an important source of selenium to the continent. Research methods involve microcosm studies with marine phytoplankton and subsequent trapping and characterization of produced volatile selenium species. Expected results will greatly contribute to an improved understanding of the role of marine phytoplankton in the global selenium cycle. Also, field experiments are planned to quantify fluxes of volatile selenium compounds from continental environments. The deposition of atmospherically transported selenium on the continent will be the main focus of the other work program. A key field site for this work program is the Chinese Loess Plateau, which has the potential to serve as environmental archive of atmospherically deposited selenium over the last 2.6 million years. The presence and mobility of trace elements will be studied in the loess sediments using different geochemical analytical techniques. Expected results will advance understanding of atmospheric selenium deposition and give insight in the role that climate plays on the continental abundance of selenium. These studies will pave the way for future predictions of selenium distribution patterns based on climate data. Knowledge on biogenic selenium production in the ocean and continental deposition of selenium is needed to understand the environmental fate of both natural and anthropogenic selenium emissions. This understanding is essential to prevent future selenium health hazards in a world that is increasingly affected by human activities.
Soil erosion and desertification, blowing and drifting snow, transport of pollen and seeds, dust entrainment and transport of (particulate) pollutants are some among a large number of processes governed by wind blowing on an erodible surface. The impact of these processes on the environment and both directly and indirectly on the human societies is huge, having implications for land surface geomorphology, human health, water resources, soil fertility and ecosystem biogeochemistry. In order to have full understanding of the physical mechanisms responsible for soil/snow entrainment, it is thus of crucial importance to investigate the very inner layer of the atmosphere, as close as possible to the ground. The interaction between the wind and the earth surface gives rise to a turbulent boundary layer which can lead to erosion of particles, often ranging from micron sized dust to millimeter sand grains. The action of the turbulent boundary layer essentially lead to a stress acting on the surface and ultimately a force acting on each single particle. In fluid mechanics the latter is referred to as the shear stress. In all surface transport models (from dust in deserts, to gravel in rivers, to PM10 particles in an industrial area) the shear stress is the key parameter. The amount of particles transported has almost always been described as a function of the difference between the shear stress and a threshold. Therefore, the prediction of the shear stress acting on the surface is a crucial pre-requisite to estimate mass transport rates. Very often, erodible soil or snow surfaces are covered by vegetation. It has long been known that vegetated surfaces prevent soil erosion by means of mainly three mechanisms. Firstly vegetation shelters the soil by simply reducing the surface exposed to the wind. Secondly, vegetation can trap particles in motion hence acting like a sink for sediments. Finally, vegetation decreases the shear stress acting on the erodible ground by absorbing the momentum flux from the airflow above, therefore weakening the erosive power of the wind. In this project we are concerned with quantifying this last effect for a selected variety of plants species and plant cover densities. The long term application of such study will be to develop a model which, for a given wind velocity and vegetation cover is able to predict the shear stress acting on the bottom surface. Such information can then be used as an input for sediment/snow transport models.
Small molecule natural products are a prolific source of inspiration for the development of new drugs, and essential tools in basic biomedical research as probes of biological functions. The contribution of academic laboratories in natural products discovery has been essential. The limiting factor of traditional approaches in bioactivity-directed natural product research has been the tedious process of purification and identification of active molecules from a highly complex extract matrix. Recent technological advances enable substantial improvements in efficiency via a consequential miniaturization of the screening and discovery process, and automation of certain process steps. The aim of the project is to discover small molecule natural products leads from plants and fungi acting against clinically relevant and/or emerging targets in important disease areas. The targets have been selected on the basis of specific criteria, such as (i) novelty and importance of target; (ii) lack of specific/selective inhibitors; (iii) need for enhancement of structural diversity of ligands; (iv) difficulty/impossibility to use rational drug discovery approaches; (v) access to animal models. Indications include CNS (selective GABA-A receptor agonists), inflammation and cancer (modulation of angiogenesis and lymphangiogenesis, inhibition of PI3 kinases). In addition, a screening for hERG channel inhibition will be carried out as the currently most critical anti-target in drug discovery & development. An extract library and a technology platform for the miniaturized discovery of natural products will be used. The library consists of currently 1000 plant and fungal extracts. An ethnomedicine-based focussed sub-library will be specifically tested for GABAA receptor agonistic properties. All process steps in the screening and consecutive lead identification are miniaturized, in part automated, and based on the 96-well microtiter footprint. Most of the assays are via external collaborations, and some assays involving cell signalling are established in-house. Prioritized extracts are submitted to HPLC-based activity profiling with microtiter-based fractionation of column effluent, and simultaneous on-line spectroscopic (PDA, ion-trap ESI and APCI-MS, and ESI-TOF) analysis. Compound dereplication and identification is supported by off-line microprobe NMR spectroscopy. Around the active target molecules, structurally related compounds will be characterized to generate small 'virtual' libraries for preliminary structure activity relationships. Calculation of physico-chemical data and secondary bioassays will characterize leads, and shortlisted compounds will be tested in vivo for proof of concept. For this purpose, compounds of interest are isolated in a targeted manner in amounts of up to several hundred mg.
Global biodiversity is declining at an alarming rate and traditional conservation areas are no longer sufficient to slow this decline, so the potential contribution of managed land for conservation is increasingly acknowledged. This includes a broadening of the perspective from the field and farm to the landscape level, considering the often neglected spatial and temporal turnover in anthropogenic mosaic landscapes. Here we will use a highly replicated study design with the experimental exposure of standardized nesting resources to examine the relative importance of habitat type to landscape diversity using trap-nesting bees, wasps and their natural enemies. We will analyze the scale-dependence of partitioned biodiversity and quantify host-parasitoid and prey-predator interactions, as well as make food web statistics with a fully quantified interaction web (following Tylianakis et al. 2007, Nature 445: 2002-5). We will show how the major habitat types in our mosaic landscapes (and different years) contribute to overall species richness, comparing wheat, oilseed rape, grassland, field margin strips, fallows and forest margins, which represent a gradient of anthropogenic disturbance. We will examine how landscape composition influences the relative contribution of the six habitat types to species richness by focusing on a gradient of simple to complex structured landscapes. Further, we expect enemy richness to be related to host/prey mortality, so we will contribute to this highly debated topic. The mosaic structure of agricultural landscapes allow to study little known effects of landscape configuration, including spillover effects across habitats, inhibition of dispersal (by hostile cereal fields) and facilitation (by grassy corridors). Experiments with marked bee and wasp individuals allow to describe foraging behaviour and resource use across habitats.
The aim of CH-HALOMED is to install a measurement equipment to analyse halogenated greenhouse gases in the laboratory of Empa in addition to the continuously running identical system at Jungfraujoch (MEDUSA). This measurement equipment has been developeed by SIO in La Jolla (California) and is the main instrumentation used world-wide to perform state-of-the art measurements of halogenated greenhouse gases. The scientific goals of CH-HALOMED are to developing analytical methods for new halocarbons used in the industry and in consumer products and advance the sample trapping technology within the MEDUSA. Furthermore, the new system will allow sustaining the intercomparability within the European network: System for Observation of Halogenated Greenhouse Gases in Europe (SOGE) and its extension to China (SOGE-A) and linking of standards and scales at Jungfraujoch to those of AGAGE/NOAA. The instrumentation of CH-HALOMED will be used to analyse atmospheric halocarbons from international projects such as CARIBIC (air sampled by commercial aircrafts) and Antarctic samples by KOPRI (Korea Polar Research Institute) and NILU (Norwegian Institute for Air Research). Finally the MEDUSA system will be used for quantification of Swiss emissions of halogenated greenhouse gases by analysing air samples from the suburban station of Duebendorf (near Zurich). The context of CH-HALOMED is the global effort to assess the contribution of halogenated greenhouse gases to global warming. This is achieved by estimating global emissions of halogenated greenhouse gases (i.e. CFCs, HFCs, SF6) uisng their behaviour in the background air masses and to assess regional sources, using pollution events occuring at measurement sites in different continents. Furthermore, the MEDUSA system is extremely well-suited for detection of newly released industrial compounds in the atmosphere. The applicability of this concept has already been shown by Empa using existing equipments. With the new MEDUSA Empa has the possibility to advance in this field to faster reacting hydrofluorcarbons, which will be produced by industry in the next years. Although these compounds do have a minor influence on the global warming, their degradation products (i.e. fluorinated organic acids) could potentially affect aquatic bio-organisms.
| Origin | Count |
|---|---|
| Bund | 20 |
| Type | Count |
|---|---|
| Förderprogramm | 20 |
| License | Count |
|---|---|
| offen | 20 |
| Language | Count |
|---|---|
| Deutsch | 4 |
| Englisch | 19 |
| Resource type | Count |
|---|---|
| Keine | 18 |
| Webseite | 2 |
| Topic | Count |
|---|---|
| Boden | 18 |
| Lebewesen & Lebensräume | 20 |
| Luft | 17 |
| Mensch & Umwelt | 20 |
| Wasser | 16 |
| Weitere | 20 |