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Forschergruppe (FOR) 1320: Crop Sequence and Nutrient Acquisition from the Subsoil, Plant induced weathering of minerals in the subsoil - release of 'non-exchangeable' potassium from 2:1 layer minerals (TransMinK)

The proposal addresses the potential of subsoil to contribute to K nutrition of crops. More specifically we will address the processes controlling release of K from interlayer of 2:1 clay minerals as this is expected to be the dominant K fraction in the subsoil. While it has been shown in the past that this so called 'non-exchangeable' K can be released due to root activity, there are controversial results concerning the role of soil solution K concentration in the rhizosphere required to trigger the process. Likewise little information is available about the concentration dynamics of other cations (NH4, Ca) in the rhizosphere and their impact on K release and vermiculitization supposed to be associated with this process. Model studies with substrate from the central field trial will be conducted in compartment systems equipped with micro suction cups. The measurement of dynamic changes of soil solution composition with increasing distance from the root surface will be combined with investigations of changes in mineralogy by XRD, TEM and SEM-EDX. Changes of mineralogy as a result of plant induced K release from interlayer will also be studied on bulk soil and rhizosphere samples collected within the central field and the central microcosm experiment and with mineral bags exposed in the field during a cropping cycle. Finally, X-ray CT will be used to access changes in soil texture, i.e. clay distribution around roots and the temporal spread of roots in biopores which is a prerequisite for K uptake from such structures.

Modes of vector transmission of Cherry leaf roll virus (CLRV) - molecular basis and potential arthropod vector species

Cherry leaf roll virus (CLRV) is a plant pathogen of economic and ecologic importance. It is globally distributed in a wide range of forest, fruit, and ornamental trees and shrubs. In several areas of cherry and walnut production CLRV causes severe losses in yield and quality. With current reference to the rapid dissemination and strong symptom expression in Finnish birches and the Germany-wide distribution of CLRV in birches and elderberry, we continuously investigate and gradually reveal CLRV transmission pathways as by pollen, seeds or water. However, modes and interactions responsible for the wide intergeneric host transmission as well as for the exceptional CLRV epidemic in Fennoscandia still remain unknown. In this project systematic studies shall investigate biological vectors as a causal agent to finally derive control mechanisms and strategies to avoid new epidemics in different hosts and geographic regions. Detailed monitoring of the invertebrate fauna of birch stands/forests and elderberry plantations in Germany and Finland shall reveal potential vectors to subsequently study them in detail by approved virus detection methods and transmission experiments. Molecular analyses of the CLRV coat protein shall prove its role as a viral determinant for a virus/vector interaction. Consequently, this project essentially will contribute important answers on the CLRV epidemiology, and this will be a key element within the first network of research on plant viral pathogens in forest trees.

Effects of canopy structure on salinity stress in cucumber (Cucumis sativus L.)

Salinity reduces the productivity of cucumber (Cucumis sativus L.) through osmotic and ionic effects. For given atmospheric conditions we hypothesize the existence of an optimal canopy structure at which water use efficiency is maximal and salt accumulation per unit of dry matter production is minimal. This canopy structure optimum can be predicted by integrating physiological processes over the canopy using a functional-structural plant model (FSPM). This model needs to represent the influence of osmotic stress on plant morphology and stomatal conductance, the accumulation of toxic ions and their dynamics in the different compartments of the system, and their toxic effects in the leaf. Experiments will be conducted to parameterize an extended cucumber FSPM. In in-silico experiments with the FSPM we attempt to identify which canopy structure could lead to maximum long-term water use efficiency with minimum ionic stress. The results from in-silico experiments will be evaluated by comparing different canopy structures in greenhouses. Finally, the FSPM will be used to investigate to which extent the improvement of individual mechanisms of salt tolerance like reduced sensitivity of stomatal conductance or leaf expansion can contribute to whole-plant salt tolerance.

Forschergruppe (FOR) 1806: The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM), Biological Regulation of Subsoil C-cycling under Field Conditions

The nature of the microbial communities inhabiting the deeper soil horizons is largely unknown. It is also not clear why subsurface microorganisms do not make faster use of organic compounds under field conditions. The answer could be provided by a reciprocal soil transfer experiment studying the response of transferred soils to fluctuations in microclimate, organic inputs, and soil biota. The subproject P9 will be responsible for the establishment of reciprocal transfer experiments offering a strong link between subgroups interested in organic matter quality, transport of organic substances, as well as functions of the soil microbial community. A single, high molecular weight substrate (13C labelled cellulose) will be applied at two different levels in the pre-experiment to understand the dose-dependent reaction of soil microorganisms in transferred surface and sub-soils. Uniformly 13C labelled beech roots - representing complex substrates - will be used for the main reciprocal soil transfer experiment. We hypothesize that transferring soil cores between subsoil and surface soil as well as addition of labelled cellulose or roots will allow us to evaluate the relative impact of surface/subsurface habitat conditions and resource availability on abundance, function, and diversity of the soil microbial community. The second objective of the subproject is to understand whether minerals buried within different soil compartments (topsoil vs. subsoil) in the field contribute to creation of hot spots of microbial abundance and activity within a period of two to five years. We hypothesize that soil microorganisms colonize organo-mineral complexes depending on their nutritional composition and substrate availability. The existence of micro-habitat specific microbial communities could be important for short term carbon storage (1 to 6 years). The third objective is to understand the biogeography and function of soil microorganisms in different subsoils. Parent material as well as mineral composition might control niche differentiation during soil development. Depending on size and interconnectedness of niches, colonization and survival of soil microbial communities might be different in soils derived from loess, sand, terra fusca, or sandstone. From the methodological point of view, our specific interest is to place community composition into context with soil microbial functions in subsoils. Our subgroup will be responsible for determining the abundance, diversity, und function of soil microorganisms (13C microbial biomass, 13C PLFA, enzyme activities, DNA extraction followed by quantitative PCR). Quantitative PCR will be used to estimate total abundances of bacteria, archaea and fungi as well as abundances of specific groups of bacteria at high taxonomic levels. We will apply taxa specific bacterial primers because classes or phyla might be differentiated into ecological categories on the basis of their life strategies.

Drivers and mechanisms of 13C discrimination in Cleistogenes squarrosa (C4) - reducing uncertainties on bundle sheath leakiness

The energetic efficiency of C4 photosynthesis is strongly affected by bundle sheath leakiness, which is commonly assessed with the 'linear version' of the Farquhar model of 13C discrimination, and leaf gas exchange and 13C composition data. But, the linear Farquhar model is a simplification of the full mechanistic theory of ? in C4 plants, potentially generating errors in the estimation of leakiness. In particular, post-photosynthetic C isotope fractionation could cause large errors, but has not been studied in any detail. The present project aims to improve the understanding of the ecological and developmental/physiological factors controlling discrimination and leakiness of the perennial grass Cleistogenes squarrosa. C. squarrosa is the most important member of the C4 community which has spread significantly in the Mongolia grasslands in the last decades. It has an unusually high and variable discrimination, which suggests very high (and potentially highly variable) leakiness. Specifically, we will conduct the first systematic study of respiratory 13C fractionation in light and dark at leaf- and stand-scale in this C4 species, and assess its effect on discrimination and estimates of leakiness. These experiments are conducted in specialized 13CO2/12CO2 gas exchange mesocosms using ecologically relevant scenarios, testing specific hypotheses on effects of environmental drivers and plant and leaf developmental stage on discrimination and leakiness.

Contribution of ectomycorrhizal fungi to the formation and mobilization of soil organic matter (SOM)

In forest ecosystems ectomycorrhizal fungi are responsible for the mobilization of mineral nutrients from soil organic matter (SOM) resulting in a marked increase in productivity of their symbiotic host plants. In return the fungi obtain a significant amount of photosynthetic products from these plants, allowing the formation of an extensive hyphal system. These hyphae constitute a major part of soil biomass and, ultimately, a major source for SOM formation. While plant-fungal nutrient exchange has been analyzed extensively, this proposal is focused on the fungal contribution to SOM formation and on the processes leading to the acquisition of nutrients by the fungi. These two processes will be studied separately and in a quantitative way using isotopic labeling in soil bioreactors. Analysis of the fate of 13C labeled fungal material (Laccaria bicolor) in soil bioreactors will tell how fast and to what extent the various fractions of hyphal biomass are transformed into non-living SOM. As potential molecular or structural markers for SOM formation from fungal hyphae we will analyze characteristic remnants of fungal hyphae in SOM using scanning electron microscopy, DNAfragments using a PCR approach for the fungal rRNA internal transcribed spacerregions and biochemical markers like fatty acids and ergosterol. The impact of ectomycorrhizal mycelia supported by Pinus sylvestris plantlets on 13C- and 15N-labeled SOM and on microbial biomass will be analyzed in separate soil bioreactor experiments.

Forschergruppe (FOR) 456 degree of celsius: The role of Biodiversity for element cycling and trophic interactions: An experimental approach in a grassland community, FOR 438: Die Bedeutung von Biodiversität für Stoffkreisläufe und trophische Interaktionen: Ein Versuchsansatz in Grasslandgesellschaften - Teilprojekt: Diversität und Funktion von arbuskulären Mykorrhiza- und Bodenpilzen mit oxidativem Potential in Grasländern mit unterschiedlichen Stufen pflanzlicher Diversität

Das Jena Experiment hat es sich zum Ziel gesetzt Zusammenhänge zwischen Pflanzendiversität und Ökosystemprozessen zu untersuchen. Unsere Arbeiten beschäftigen sich mit einer der Schlüsselgruppen in unterirdischen Ökosystemprozessen - den Pilzen. Das Wirtsspektrum arbuskulärer Mykorrhizapilze (AMF) wird innerhalb der Monokultur-Plots untersucht. In Polykulturen unterschiedlicher Diversität soll der Zusammenhang zwischen Artenreichtum von Pflanzen und AMF vertiefend studiert werden. Durch ein Experiment mit stabilen Isotopen soll der Beitrag der AMF für die Nährstoffverteilung zwischen einzelnen Pflanzenarten, aber auch zwischen funktionellen Gruppen näher beleuchtet werden. Weiterhin wird untersucht, ob Zusammenhänge zwischen Stickstoffmineralisierung, Anreicherung organischer Substanzen sowie der Diversität und dem Expressionsprofil pilzlicher Laccasegene bestehen.

Spatial heterogeneity and substrate availability as limiting factors for subsoil C-turnover

In subsoils, organic matter (SOM) concentrations and microbial densities are much lower than in topsoils and most likely highly heterogeneously distributed. We therefore hypothesize, that the spatial separation between consumers (microorganisms) and their substrates (SOM) is an important limiting factor for carbon turnover in subsoils. Further, we expect microbial activity to occur mainly in few hot spots, such as the rhizosphere or flow paths where fresh substrate inputs are rapidly mineralized. In a first step, the spatial distribution of enzyme and microbial activities in top- and subsoils will be determined in order to identify hot spots and relate this to apparent 14C age, SOM composition, microbial community composition and soil properties, as determined by the other projects within the research unit. In a further step it will be determined, if microbial activity and SOM turnover is limited by substrate availability in spatially distinct soil microsites. By relating this data to root distribution and preferential flow paths we will contribute to the understanding of stabilizing and destabilizing processes of subsoil organic matter. As it is unclear, at which spatial scale these differentiating processes are effective, the analysis of spatial variability will cover the dm to the mm scale. As spatial segregation between consumers and substrates will depend on the pore and aggregate architecture of the soil, the role of the physical integrity of these structures on SOM turnover will also be investigated in laboratory experiments.

Forschergruppe (FOR) 1525: INUIT - Ice Nuclei research UnIT, Die Bedeutung von Eisnukleationspartikeln und -moden für die Entstehung der Eisphase und Niederschlag: Modellsimulationen basierend auf Labormesssungen

In diesem Projekt sollen mit COSMO-SPECS, einem 3D-Wolkenmodell mit einer spektralen Beschreibung der wolken-mikrophysikalischen Prozesse von Hydrometeoren und Aerosolpartikeln, Modellsimulationen durchgeführt werden. Da dasselbe mikrophysikalische Schema in dem Luftpaketmodell enthalten ist, mit dem in INUIT-1 gearbeitet wurde, werden alle neuen Entwicklungen und Verbesserungen der Mikrophysik aus INUIT-1 direkt in COSMO-SPECS übertragen. Zunächst soll ein künstlicher Testfall simuliert werden, eine Wärmeblase über einem flachen Gelände. Sensitivitätsstudien sollen die Entwicklung der Eisphase und die Bildung von Niederschlag aufzeigen, wobei die Verteilung und die Typen der Eisnukleations-Partikel auf realistische Weise variiert werden. Ein anderer Schwerpunkt der Sensitivitätsstudien soll auf der Wirkung von sog. kleinen Triggern liegen, wie etwa Eisnukleations-Partikel oder Gefriermoden (z.B. biologische Partikel oder Kontaktgefrieren), die keine signifikanten Effekte hinsichtlich der Anzahl der entstehenden Eispartikel zeigen, aber doch die Dynamik der Wolke in einer Weise beeinflussen können, dass sich im Endeffekt die Eisbildung erhöht. Weiterhin ist in Zusammenarbeit mit INUIT RP5 eine Fallstudie geplant, die auf INUIT Feldexperimenten basiert. Hier sollen die Beiträge der verschiedenen eisbildenden Prozesse quantifiziert werden und dadurch die atmosphärische Relevanz der Eisbildungs-Regimes, wie sie in INUIT Labor- und Feldexperimenten untersucht werden, abgeschätzt werden. Gleichzeitig werden neue Parametrisierungen für Partikel, die während INUIT-2 untersucht werden, entwickelt und in das mikrophysikalische Schema eingebunden; vorhandene Parametrisierungen sollen weiter modifiziert und verbessert werden. Dieses Projekt schließt selbst auch Laborexperimente zum Kontakt- und Immersionsgefrieren ein, die am Mainzer vertikalen Windkanal und mit einer akustischen Tropfenfalle durchgeführt werden. Hier liegt der Schwerpunkt auf einer Verbesserung des Kontaktgefrierens. Die Experimente sollen am Mainzer vertikalen Windkanal durchgeführt werden, wobei unterkühlte Tropfen in einem Luftstrom, der die potentiellen Kontakteiskeime mit sich führt, frei ausgeschwebt werden. Auf diese Weise kann die Anzahl der Kollisionen zwischen Tropfen und Partikeln berechnet und die Gefriereffizienz, d.h. die Gefrierwahrscheinlichkeit für eine Tropfen-Partikel Kollision bestimmt werden.

Forschergruppe (FOR) 1525: INUIT - Ice Nuclei research UnIT, Chemische und mineralogische Charakterisierung von Eisnuklei und Eisresiduen

Vorkommen, Häufigkeit, chemische Zusammensetzung und Mischungszustand jener Aerosolpartikel in der Erdatmosphäre, an denen sich durch heterogene Nukleation in unterkühlten Wolken Eis bilden kann (Ice Nucleating Particles = INP), werden experimentell untersucht. Diese Informationen sind wichtig für das Verständnis der Niederschlagsbildung, und finden in parametrisierter Form Eingang in meteorologische Modelle zur Vorhersage des Niederschlages. Das Projekt verwendet hierbei im Wesentlichen physikalische Methoden zur Identifikation und Isolation der Partikel aus der Atmosphäre, und nachfolgend elektronenmikroskopische Methoden zur mineralogischen Analyse einzelner Partikel. Die Identifikation jener wenigen Aerosolpartikel (ca. 1 von 10.000 bis 1 von 100.000), die Eisbildungsfähigkeit besitzen, erfolgt, indem eine Aerosolprobe einer Unterkühlung unter 0°C und Wasserdampfübersättigung ausgesetzt wird, und die an INP entstehenden Eiskristalle fotografiert und gezählt werden. Es werden sowohl Aerosolpartikel aus luftgetragenem Aerosol untersucht (aus dem Eiskeimzähler FINCH) wie auch Partikel, die aus einer Luftprobe auf einem Silizium-Probenträger niedergeschlagen und danach als INP identifiziert wurden (Eiskeimzähler FRIDGE). Eine dritte und vierte Methode (Ice-CVI und ISI) isolieren eisbildungsfähige Partikel, indem aus einer angesaugten Probe von Wolkenluft die Eiskristalle strömungstechnisch von den übrigen Luftbestandteilen getrennt werden. Alle Eiskeimproben werden im Rasterelektronenmikroskop auf Größe, Morphologie, Mischungszustand und chemische Zusammensetzung untersucht und die Ergebnisse der verschiedenen Ansätze verglichen. In Feldexperimenten werden Atmosphärenproben verschiedener geographischer Provenienz (Mitteleuropa, Forschungsstation Jungfraujoch, Wüstenstaub, Vulkanstaub) erhalten. In Laborexperimenten wird mit vorher gesammelt und charakterisierten Modellsubstanzen gearbeitet. Weiterhin wird durch tägliche Messungen der Anzahl-Konzentration und Zusammensetzung von Eiskeimen am Taunus Observatorium nahe Frankfurt über einen längeren Zeitraum untersucht, ob es Saisonalitäten, bevorzugte Quellgebiete (z.B. Wüsten, Industrie, etc.) und biologische Einflussfaktoren (z.B. Pollen, Pflanzenabrieb, Bakterien) für das Vorkommen von Eisnuklei gibt.

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