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The aim of P2 within the Research Unit 'The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM)' is to contribute to the understanding of the different sources and stabilization processes of subsoil organic matter. This will be achieved by the analysis of the soil organic matter composition in topsoil versus subsoil by 13C NMR spectroscopy in bulk soils as well as organo-mineral associations. This will be done on a number of soil profiles differing in parent material and mineralogy and therefore also in the relevance of organo-mineral associations for subsoil C stabilization. In addition, a specific sampling approach will allow to differentiate three zones associated with the dominating effect of (1) leaching of DOC (the 'bulk soil' between trees), (2) root litter decomposition (the 'root-affected zone'), and (3) direct rhizodeposition of root exudates (the 'rhizosphere' sensu strictu). The contribution of above-ground versus below-ground litter is differentiated by the analysis of cutin and suberin biomarkers. Organic matter derived from microbial sources will be identified by the microbial signature of polysaccharides in the subsoil through the analysis of neutral sugars and amino sugars. Organo-mineral associations will be further characterized by N2-BET analyses to delineate the coverage of the mineral phase with organic matter. With these analyses and our specific analytical expertise at the submicron scale (nanoSIMS) we will participate in selected joint experiments of the research unit.
Farm structures are often characterized by regional heterogeneity, agglomeration effects, sub-optimal farm sizes and income disparities. The main objective of this study is to analyze whether this is a result of path dependent structural change, what the determinants of path dependence are, and how it may be overcome. The focus is on the German dairy sector which has been highly regulated and subsidized in the past and faces severe structural deficits. The future of this sector in the process of an ongoing liberalization will be analyzed by applying theoretical concepts of path dependence and path breaking. In these regards, key issues are the actual situation, technological and market trends as well as agricultural policies. The methodology will be based on a participative use of the agent-based model AgriPoliS and participatory laboratory experiments. On the one hand, AgriPoliS will be tested as a tool for stakeholder oriented analysis of mechanisms, trends and policy effects. This part aims to analyze whether and how path dependence of structural change can be overcome on a sector level. In a second part, AgriPoliS will be extended such that human players (farmers, students) can take over the role of agents in the model. This part aims to compare human agents with computer agents in order to overcome single farm path dependence.
Chromium (Cr) is introduced into the environment by several anthropogenic activities. A striking ex-ample is the area around Kanpur in the Indian state of Uttar Pradesh, where large amounts of Cr-containing wastes have been recently illegally deposited. Hexavalent Cr, a highly toxic and mobile contaminant, is present in significant amounts in these wastes, severely affecting the quality of sur-roundings soils, sediments, and ground waters. The first major goal of this study is to clarify the solid phase speciation of Cr in these wastes and to examine its leaching behavior. X-ray diffraction and synchrotron-based X-ray absorption spectroscopy techniques will be employed for quantitative solid phase speciation of Cr. Its leaching behavior will be studied in column experiments performed at un-saturated moisture conditions with flow interruptions simulating monsoon rain events. Combined with geochemical modeling, the results will allow the evaluation of the leaching potential and release kinetics of Cr from the waste materials. The second major goal is to investigate the spatial distribution, speciation, and solubility of Cr in the rooting zone of chromate-contaminated soils surrounding the landfills, and to study the suitability of biochar as novel soil amendment for mitigating the deleterious effects of chromate pollution. Detailed field samplings and laboratory soil incubation studies will be carried out with two agricultural soils and biochar from the Kanpur region.
Biogeochemical interfaces shape microbial community function in soil. On the other hand microbial communities influence the properties of biogeochemical interfaces. Despite the importance of this interplay, basic understanding of the role of biogeochemical interfaces for microbial performance is still missing. We postulate that biogeochemical interfaces in soil are important for the formation of functional consortia of microorganisms, which are able to shape their own microenvironment and therefore influence the properties of interfaces in soil. Furthermore biogeochemical interfaces act as genetic memory of soils, as they can store DNA from dead microbes and protect it from degradation. We propose that for the formation of functional biogeochemical interfaces microbial dispersal (e.g. along fungal networks) in response to quality and quantity of bioavailable carbon and/or water availability plays a major role, as the development of functional guilds of microbes requires energy and depends on the redox state of the habitat.To address these questions, hexadecane degradation will be studied in differently developed artificial and natural soils. To answer the question on the role of carbon quantity and quality, experiments will be performed with and without litter material at different water contents of the soil. Experiments will be performed with intact soil columns as well as soil samples where the developed interface structure has been artificially destroyed. Molecular analysis of hexadecane degrading microbial communties will be done in vitro as well as in situ. The corresponding toolbox has been successfully developed in the first phase of the priority program including methods for genome, transcriptome and proteome analysis.
Vorkommen, Häufigkeit, chemische Zusammensetzung und Mischungszustand jener Aerosolpartikel in der Erdatmosphäre, an denen sich durch heterogene Nukleation in unterkühlten Wolken Eis bilden kann (Ice Nucleating Particles = INP), werden experimentell untersucht. Diese Informationen sind wichtig für das Verständnis der Niederschlagsbildung, und finden in parametrisierter Form Eingang in meteorologische Modelle zur Vorhersage des Niederschlages. Das Projekt verwendet hierbei im Wesentlichen physikalische Methoden zur Identifikation und Isolation der Partikel aus der Atmosphäre, und nachfolgend elektronenmikroskopische Methoden zur mineralogischen Analyse einzelner Partikel. Die Identifikation jener wenigen Aerosolpartikel (ca. 1 von 10.000 bis 1 von 100.000), die Eisbildungsfähigkeit besitzen, erfolgt, indem eine Aerosolprobe einer Unterkühlung unter 0°C und Wasserdampfübersättigung ausgesetzt wird, und die an INP entstehenden Eiskristalle fotografiert und gezählt werden. Es werden sowohl Aerosolpartikel aus luftgetragenem Aerosol untersucht (aus dem Eiskeimzähler FINCH) wie auch Partikel, die aus einer Luftprobe auf einem Silizium-Probenträger niedergeschlagen und danach als INP identifiziert wurden (Eiskeimzähler FRIDGE). Eine dritte und vierte Methode (Ice-CVI und ISI) isolieren eisbildungsfähige Partikel, indem aus einer angesaugten Probe von Wolkenluft die Eiskristalle strömungstechnisch von den übrigen Luftbestandteilen getrennt werden. Alle Eiskeimproben werden im Rasterelektronenmikroskop auf Größe, Morphologie, Mischungszustand und chemische Zusammensetzung untersucht und die Ergebnisse der verschiedenen Ansätze verglichen. In Feldexperimenten werden Atmosphärenproben verschiedener geographischer Provenienz (Mitteleuropa, Forschungsstation Jungfraujoch, Wüstenstaub, Vulkanstaub) erhalten. In Laborexperimenten wird mit vorher gesammelt und charakterisierten Modellsubstanzen gearbeitet. Weiterhin wird durch tägliche Messungen der Anzahl-Konzentration und Zusammensetzung von Eiskeimen am Taunus Observatorium nahe Frankfurt über einen längeren Zeitraum untersucht, ob es Saisonalitäten, bevorzugte Quellgebiete (z.B. Wüsten, Industrie, etc.) und biologische Einflussfaktoren (z.B. Pollen, Pflanzenabrieb, Bakterien) für das Vorkommen von Eisnuklei gibt.
Due to its location at the air-sea interface, the sea surface microlayer is prone to accumulating anthropogenic pollutants. We analyzed the presence of antibiotic compounds, including ciprofloxacin, in this area using ultra-performance liquid chromatography—triple quadrupole mass spectrometry in tandem with ionization spray (UPLC-QqQMS/MS) (Bruker EVOQ Elite system, Billerica MA). We compared the numbers and concentrations of these compounds in the microlayer to those found in the underlying water column.
The sea surface microlayer (SML) of marine environments is hostile, exposing bacteria to extreme conditions such as temperatures and salinity fluctuations, solar radiation, and the presence of toxic substances such as heavy metals, microplastics, and pharmaceutical compounds. Our study focused on investigating the ecotoxicological effects of varying ciprofloxacin concentrations (0, 10, 50, and 100 ng/ml) on bacterial abundance and enrichment in natural SML and underlying water (ULW) samples obtained from the southern North Sea. In addition, we analyzed the samples for the presence of ciprofloxacin and 25 other antibiotics, including lincomycin, clindamycin, clarithromycin, erythromycin, azithromycin, ofloxacin and novobiocin. Furthermore, we carried out antibiotic susceptibility tests on marine bacterial isolates cultivated in the presence of 100 ng mL ⁻¹, utilizing antibiotics commonly found in their natural habitats. We observed a decrease in bacterial abundance and enrichment in the SML and ULW when exposed to 50 and 100 ng/ml of ciprofloxacin. However, over time, the abundance and enrichment of bacteria increased at these concentrations, indicating resistance. The presence of 100 ng/ml of ciprofloxacin also exerted selective pressure on bacterial members in the SML and ULW, and we cultivated 42 marine and 55 nonmarine bacteria in the presence of 100 ng/ml of ciprofloxacin. Although ciprofloxacin was not detected, we found 11 other antibiotics, particularly in the SML. When we exposed marine bacteria to antibiotics such as novobiocin, ofloxacin, clarithromycin, erythromycin, and clindamycin found in the environment, we observed that some marine bacteria are resistant to these antibiotics. Our findings suggest that resistance in marine bacteria can be acquired through exposure to antibiotics released into coastal water bodies.
We conducted a mesocosm experiment with an integrated multiple driver design to assess the impact of future global change scenarios on plankton, a key component of marine food webs. The experimental treatments were based on the RCP 6.0 and 8.5 scenarios developed by the IPCC, which were Extended (ERCP) to integrate the future predicted changing nutrient inputs into coastal waters. The mesocosm experiment was conducted over three weeks in late-summer (August-September) 2018. Seawater containing a natural plankton community was collected from the coastal North Sea. At the onset of the experiment, CO2 saturated seawater was added to the ERCP scenario mesocosms to adjust pCO2 and pH levels for each scenario. To create a realistic environment, we also manipulated the atmospheric pCO2 in the enclosed mesocosm tanks throughout the experiment. Seawater temperature was adjusted daily according to the current North Sea temperature measured at the Helgoland Roads for the Ambient, and 1.5°C and 3.0°C warmer for the ERCP 6.0 and ERCP 8.5 scenarios, respectively. Dissolved nutrient concentrations were determined at the onset of the experiment and adjusted to reach the desired N:P ratios. Samples were taken in an interval of 1-3 days depending on the phytoplankton bloom development, and community composition, except for the large mesozooplankton, was monitored throughout the experiment period.
Changes in agroecosystem management (e.g. landscape diversity, management intensity) affect the natural control of pests. The effects of agricultural change on this ecosystem service, however, are not universal and the mechanisms affecting it remain to be understood. As biological control is effectively the product of networks of interactions between pests and their natural enemies, food web analysis provides a versatile tool to address this gap of knowledge. The proposed project will utilize a molecular food web approach and examine, for the first time, how changes in plant fertilisation and landscape complexity affect quantitative aphid-parasitoid-hyperparasitoid food webs on a species-specific level to unravel how changes in food web interactions affect parasitoid aphid control. Based on the fieldderived data, cage experiments will be conducted to assess how parasitoid diversity and identity affect parasitoid interactions and pest control, complementing the field results. The work proposed here will take research on parasitoid aphid control one step further, as it will provide a clearer understanding of how plant fertilization affects whole aphid-parasitoid food webs in both simple and complex landscapes, allowing for further improvements in natural pest control.
Arsenic-contaminated ground- and drinking water is a global environmental problem with about 1-2Prozent of the world's population being affected. The upper drinking water limit for arsenic (10 Micro g/l) recommended by the WHO is often exceeded, even in industrial nations in Europe and the USA. Chronic intake of arsenic causes severe health problems like skin diseases (e.g. blackfoot disease) and cancer. In addition to drinking water, seafood and rice are the main reservoirs for arsenic uptake. Arsenic is oftentimes of geogenic origin and in the environment it is mainly bound to iron(III) minerals. Iron(III)-reducing bacteria are able to dissolve these iron minerals and therefore release the arsenic to the environment. In turn, iron(II)-oxidizing bacteria have the potential to co-precipitate or sorb arsenic during iron(II)- oxidation at neutral pH followed by iron(III) mineral precipitation. This process may reduce arsenic concentrations in the environment drastically, lowering the potential risk for humans dramatically.The main goal of this study therefore is to quantify, identify and isolate anaerobic and aerobic Fe(II)-oxidizing microorganisms in arsenic-containing paddy soil. The co-precipitation and thus removal of arsenic by iron mineral producing bacteria will be determined in batch and microcosm experiments. Finally the influence of rhizosphere redox status on microbial Fe oxidation and arsenic uptake into rice plants will be evaluated in microcosm experiments. The long-term goal of this research is to better understand arsenic-co-precipitation and thus arsenic-immobilization by iron(II)-oxidizing bacteria in rice paddy soil. Potentially these results can lead to an improvement of living conditions in affected countries, e.g. in China or Bangladesh.
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