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Ecosystem Engineering: Sediment entrainment and flocculation mediated by microbial produced extracellular polymeric substances (EPS)

Sediment erosion and transport is critical to the ecological and commercial health of aquatic habitats from watershed to sea. There is now a consensus that microorganisms inhabiting the system mediate the erosive response of natural sediments ('ecosystem engineers') along with physicochemical properties. The biological mechanism is through secretion of a microbial organic glue (EPS: extracellular polymeric substances) that enhances binding forces between sediment grains to impact sediment stability and post-entrainment flocculation. The proposed work will elucidate the functional capability of heterotrophic bacteria, cyanobacteria and eukaryotic microalgae for mediating freshwater sediments to influence sediment erosion and transport. The potential and relevance of natural biofilms to provide this important 'ecosystem service' will be investigated for different niches in a freshwater habitat. Thereby, variations of the EPS 'quality' and 'quantity' to influence cohesion within sediments and flocs will be related to shifts in biofilm composition, sediment characteristics (e.g. organic background) and varying abiotic conditions (e.g. light, hydrodynamic regime) in the water body. Thus, the proposed interdisciplinary work will contribute to a conceptual understanding of microbial sediment engineering that represents an important ecosystem function in freshwater habitats. The research has wide implications for the water framework directive and sediment management strategies.

Biogeochemical Processes in Tropical Soils

In recent years science has taken an increased interest in mineralization processes in tropical soils in particular under minimal tillage operations. Plant litter quality and management strongly affect mineralization-nitrification processes in soil and hence the fate of nitrogen in ecosystems and the environment. Plant secondary metabolites like lignin and polyphenols are poorly degradable and interact with proteins (protein binding capacity) and hence protect them from microbial attack. Nitrification, a microbiological process, directly and indirectly influences the efficiency of recovery of N in the vegetation as well as the loss of N (through denitrification and leaching) causing environmental pollution to water bodies and contributes to global warming (e.g. the greenhouse gas N2O is emitted as a by-product of nitrification and denitrification). Nitrifiers comprise a relatively narrow species diversity (at least as known to date) and are generally thought to be sensitive to low soil pH and stress. Despite these properties nitrification occurs in acid tropical soils with high levels of aluminium and manganese. Thus the main objective of the project will be the identification of micro-organisms and mechanisms responsible for mineralization-nitrification processes in acid tropical soils and the influence of long-term litter input of different chemical qualities and minimal tillage options. The project will include the use of stable isotopes (15N, 13C), mass spectrometry, gas chromatography (CO2, N2O), biochemical methods (PLFA) and molecular biology (16s rRNA., PCR, DGGE)

AHK-4D - High-resolution and high-frequency monitoring of the rock glacier Äußeres Hochebenkar (AHK) in Austria

The aim of this project is to develop a methodology to quantify the magnitudes and frequencies of individual surface change processes of a rock glacier over several years. We do this by analyzing three dimensional (3D) surface change based on high-resolution, high-frequency and multisource LiDAR data. The derived information will enable us to develop methods to automatically characterize and disaggregate multiple processes and mechanisms that contribute to surface change signals derived from less frequent monitoring (e.g. yearly). Such methods can enhance our general understanding of the spatial and temporal variability of rock glacier deformation and the interaction of rock glaciers with connected environmental systems.

Between Path Dependence and Path Creation: The Impact of Farmers' Behavior and Policies on Structural Change in Agriculture

Farm structures are often characterized by regional heterogeneity, agglomeration effects, sub-optimal farm sizes and income disparities. The main objective of this study is to analyze whether this is a result of path dependent structural change, what the determinants of path dependence are, and how it may be overcome. The focus is on the German dairy sector which has been highly regulated and subsidized in the past and faces severe structural deficits. The future of this sector in the process of an ongoing liberalization will be analyzed by applying theoretical concepts of path dependence and path breaking. In these regards, key issues are the actual situation, technological and market trends as well as agricultural policies. The methodology will be based on a participative use of the agent-based model AgriPoliS and participatory laboratory experiments. On the one hand, AgriPoliS will be tested as a tool for stakeholder oriented analysis of mechanisms, trends and policy effects. This part aims to analyze whether and how path dependence of structural change can be overcome on a sector level. In a second part, AgriPoliS will be extended such that human players (farmers, students) can take over the role of agents in the model. This part aims to compare human agents with computer agents in order to overcome single farm path dependence.

Formation of mega-glendonites in the aftermath of the Paleocene-Eocene thermal maximum

Glendonites are pseudomorphs after the mineral ikaite (CaCO3 x 6H2O) and composed of calcite (CaCO3). In the past, they have been used as a paleo-thermometer because the primary mineral ikaite, according to observations and experiments, seems to be formed at temperatures near freezing, high alkalinity and high phosphate concentrations in marine sediments. An enigmatic occurrence of the largest glendonites known world-wide, in the Early Eocene Fur Formation of northwestern Denmark offers the unique possibility to shed more light on the actual mechanism and controlling parameters of ikaite formation. Right in the aftermath of the Paleocene-Eocene thermal maximum, a time known for its global pertubation in the global carbon cycle, the formation of authigenic calcium carbonate concretions start in the Fur Formation. In a specific stratigraphic interval inbetween these concretions, the glendonites can be found. We will investigate if termperature changes or changes in geochemical parameters of the Danish Basin caused the sudden formation of ikaite during a time interval that was based on known paleoclimatic reconstructions (semi tropic) not favorable for ikaite formation.

Sonderforschungsbereich (SFB) 1357: MIKROPLASTIK - Gesetzmäßigkeiten der Bildung, des Transports, des physikalisch-chemischen Verhaltens sowie der biologischen Effekte: Von Modell- zu komplexen Systemen als Grundlage neuer Lösungsansätze; MICROPLASTICS - Understanding the mechanisms and processes of biological effects, transport and formation: From model to complex systems as a basis for new solut, Teilprojekt B 04: Partikelaustausch an der Luft-Wasser-Grenzfläche

Fällt ein Regentropfen auf eine Wasseroberfläche oder platzt dort eine Gasblase, so wird in einem komplizierten strömungsmechanischen Prozess eine Vielzahl kleinster Tröpfchen produziert und in die Luft geschleudert. Diese Tröpfchen können ursprünglich im Wasser vorhandene Mikroplastikpartikel in die Luft übertragen. Da sowohl Regen als auch platzende Gasblasen in natürlichen und technischen Systemen wie Ozeanen, Pfützen oder Kläranlagen extrem häufige Ereignisse sind, liegt hier ein potenziell hochrelevanter Migrationspfad von Mikroplastik aus der Hydro- in die Atmosphäre vor. Dieser Prozess soll im vorliegenden Projekt durch eine Kombination aus Modell-Experimenten und Computersimulationen im Detail untersucht und verstanden werden.

Ecological-physical linkages in fluvial eco-hydromorphology

Recent discussions on the path eco-hydromorphic research has followed in the past decades highlight the need for greater ecological input into this field. Traditional approaches have been criticized for being largely correlation-based (Vaughan et al., 2009) ecological black boxes (Leclerc, 2005) and strongly relying on weak, disproven and/or outdated assumptions about the dynamics of stream biota (Lancaster & Downes, 2010). In recognition of this, process-oriented research aiming at elucidating and quantifying causal mechanisms has been proposed as a promising approach, though challenging, to study the relations between flow, morphodynamics and biological populations in running waters. In terms of levels of biological organization, it has been recognized that processes determining the response of aquatic biota to hydromorphological alteration occur mainly at the population level. In this sense, relating demographic rates to flow and morphology seems to offer great potential for progress (Lancaster & Downes, 2010). Thus, tapping into existing ecological knowledge (e.g., key patch approach for habitat networks, Verboom et al. 2001; metapopulation theory, Levins 1970; Hanski & Gaggiotti 2004, landscape-scale estimations of habitat suitability and carrying capacity, Reijnen et al. 1995; Duel et al. 1995 2003; population-level viability estimations; Akçakaya 2001; resource utilization scales, ONeill et al. 1988; habitat-use patterns, Milne et al. 1989) in order to link ecology to hydromorphology at a more fundamental level constitutes an important path towards better science and management.

Forschergruppe (FOR) 1806: The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM)

We are currently facing the urgent need to improve our understanding of carbon cycling in subsoils, because the organic carbon pool below 30 cm depth is considerably larger than that in the topsoil and a substantial part of the subsoil C pool appears to be much less recalcitrant than expected over the last decades. Therefore, small changes in environmental conditions could change not only carbon cycling in topsoils, but also in subsoils. While organic matter stabilization mechanisms and factors controlling its turnover are well understood in topsoils, the underlying mechanisms are not valid in subsoils due to depth dependent differences regarding (1) amounts and composition of C-pools and C-inputs, (2) aeration, moisture and temperature regimes, (3) relevance of specific soil organic carbon (SOC) stabilisation mechanisms and (4) spatial heterogeneity of physico-chemical and biological parameters. Due to very low C concentrations and high spatio-temporal variability of properties and processes, the investigation of subsoil phenomena and processes poses major methodological, instrumental and analytical challenges. This project will face these challenges with a transdisciplinary team of soil scientists applying innovative approaches and considering the magnitude, chemical and isotopic composition and 14C-content of all relevant C-flux components and C-fractions. Taking also the spatial and temporal variability into account, will allow us to understand the four-dimensional changes of C-cycling in this environment. The nine closely interlinked subprojects coordinated by the central project will combine field C-flux measurements with detailed analyses of subsoil properties and in-situ experiments at a central field site on a sandy soil near Hannover. The field measurements are supplemented by laboratory studies for the determination of factors controlling C stabilization and C turnover. Ultimately, the results generated by the subprojects and the data synthesized in the coordinating project will greatly enhance our knowledge and conceptual understanding of the processes and controlling factors of subsoil carbon turnover as a prerequisite for numerical modelling of C-dynamics in subsoils.

Modes of vector transmission of Cherry leaf roll virus (CLRV) - molecular basis and potential arthropod vector species

Cherry leaf roll virus (CLRV) is a plant pathogen of economic and ecologic importance. It is globally distributed in a wide range of forest, fruit, and ornamental trees and shrubs. In several areas of cherry and walnut production CLRV causes severe losses in yield and quality. With current reference to the rapid dissemination and strong symptom expression in Finnish birches and the Germany-wide distribution of CLRV in birches and elderberry, we continuously investigate and gradually reveal CLRV transmission pathways as by pollen, seeds or water. However, modes and interactions responsible for the wide intergeneric host transmission as well as for the exceptional CLRV epidemic in Fennoscandia still remain unknown. In this project systematic studies shall investigate biological vectors as a causal agent to finally derive control mechanisms and strategies to avoid new epidemics in different hosts and geographic regions. Detailed monitoring of the invertebrate fauna of birch stands/forests and elderberry plantations in Germany and Finland shall reveal potential vectors to subsequently study them in detail by approved virus detection methods and transmission experiments. Molecular analyses of the CLRV coat protein shall prove its role as a viral determinant for a virus/vector interaction. Consequently, this project essentially will contribute important answers on the CLRV epidemiology, and this will be a key element within the first network of research on plant viral pathogens in forest trees.

Sonderforschungsbereich (SFB) 1357: MIKROPLASTIK - Gesetzmäßigkeiten der Bildung, des Transports, des physikalisch-chemischen Verhaltens sowie der biologischen Effekte: Von Modell- zu komplexen Systemen als Grundlage neuer Lösungsansätze; MICROPLASTICS - Understanding the mechanisms and processes of biological effects, transport and formation: From model to complex systems as a basis for new solut, Teilprojekt A 04: Zelluläre Aufnahme von Mikropartikeln in Abhängigkeit von elementaren Partikeleigenschaften

Verschiedene Modell-MP-Partikel sowie Modellpartikel für natürlich vorkommendes partikulares Material werden in Süßwasser und Boden inkubiert und daraus resultierende Oberflächenveränderungen werden biomolekular und physikalisch-chemisch charakterisiert. Daraufhin werden unterschiedliche Polyelektrolyt-Multilagen-beschichtete Modellpartikel hergestellt, welche in jeweils einer Eigenschaft (z.B. identische Mechanik oder Ladungsdichte) den inkubierten Partikeln gleichen. Durch einen Vergleich der verschiedenen Partikel wird daraufhin die Relevanz dieser Eigenschaft für die Adhäsion der Partikel an Zellen und die Internalisierung in Zellen quantitativ untersucht.

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