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Molecular determinants of host specificity of maize-, rice- and mango-pathogenic species of the genus Fusarium

Fusarium species of the Gibberella fujikuroi species complex cause serious diseases on different crops such as rice, wheat and maize. An important group of plant pathogens is the Gibberella fujikuroi species complex (GFC) of closely related Fusarium species which are associated with specific hosts; F. verticillioides and F. proliferatum are particularly associated with maize where they can cause serious ear-, root-, and stalk rot diseases. Two other closely related species of the GFC, F. mangiferae and F. fujikuroi, which share about 90Prozent sequence identity with F. verticillioides, are pathogens on mango and rice, respectively. All of these species produce a broad spectrum of secondary metabolites such as phytohormones (gibberellins, auxins, and cytokinins), and harmful mycotoxins, such as fumonisin, fusarin C, or fusaric acid in large quantities. However, the spectrum of those mycotoxins might differ between closely related species suggesting that secondary metabolites might be determinants for host specificity. In this project, we will study the potential impact of secondary metabolites (i.e. phytohormones and certain mycotoxins) and some other species-specific factors (e.g. species-specific transcription factors) on host specificity. The recently sequenced genomes of F. mangiferae and F. fujikuroi by our groups and the planned sequencing of F. proliferatum will help to identify such determinants by genetic manipulation of the appropriate metabolic pathway(s).

CFK-Recycling in der Kompetenzregion Augsburg

The increasing proportion of carbon fibre reinforced plastics (CFRP) in different branches of industry will result in an increasingly larger quantity of CFRP wastes in future. With regard to improved management of natural resources, it is necessary to add these fibres that require energy-intensive production to effective recycling management. But high-quality material recycling is only ecoefficient if the recycled fibres can be used to produce new high-quality and marketable products. Tests carried out up to now indicate that very good results can be expected for large-scale recycling of carbon fibres by means of pyrolysis. The waste pyrolysis plant (WPP) operated in Burgau is the only large-scale pyrolysis plant for municipal wastes in Germany. Use of this plant to treat CFRP wastes represents a unique opportunity for the whole Southern German economy and in particular the Augsburg economic region. In a study funded by the Bavarian State Ministry of the Environment and Health ('Bayerisches Staatsministerium für Umwelt und Gesundheit'), the specific implementation options for the recovery of carbon fibres from composites by means of large-scale pyrolysis have been under investigation since November 2010. To this end, in the first step a development study was carried out, which in particular examined the options for modifying the Burgau WPP for the recycling of CFRP. The knowledge acquired from the pyrolysis tests, the fibre tests and the economic feasibility study confirmed the positive assessment of the overall concept of CFRP recycling in Burgau. As an overall result, unlimited profitability was found for all scenarios with regard to investments in CFRP recycling in Burgau WPP. The work on the development study was carried out by bifa Umweltinstitut GmbH together with the Augsburg-based 'function integrated lightweight construction project group ('Funktionsintegrierter Leichtbau' - FIL) of the Fraunhofer Institute for Chemical Technology (ICT). Methods: analysis and moderation of social processes, economy and management consulting, process engineering

Carbon and Chorine Isotope Effect Study to Investigate Chlorinated Ethylene Dehalogenation Mechanisms

Chlorinated ethylenes are prevalent groundwater contaminants. Numerous studies have addressed the mechanism of their reductive dehalogenation during biodegradation and reaction with zero-valent iron. However, despite insight with purified enzymes and well-characterized chemical model systems, conclusive evidence has been missing that the same mechanisms do indeed prevail in real-world transformations. While dual kinetic isotope effect measurements can provide such lines of evidence, until now this approach has not been possible for chlorinated ethylenes because an adequate method for continuous flow compound specific chlorine isotope analysis has been missing. This study attempts to close this prevalent research gap by a combination of two complementary approaches. (1) A novel analytical method to measure isotope effects for carbon and chlorine. (2) A carefully chosen set of well-defined model reactants representing distinct dehalogenation mechanisms believed to be important in real-world systems. Isotope trends observed in biotic and abiotic environmental dehalogenation will be compared to these model reactions, and the respective mechanistic hypotheses will be confirmed or discarded. With this hypothesis-driven approach it is our goal to elucidate for the first timdehalogenation reactions.

Schwerpunktprogramm (SPP) 1488: Planetary Magnetism (PlanetMag), Mineral magnetism of shocked ferrimagnetic minerals

Magnetic properties of ferrimagnetic minerals depend on their crystal lattice, anisotropy, chemical composition and grain size. The latter parameter is strongly controlled by microstructures, which are significant for the interpretation of the magnetic properties of shocked magnetic minerals. Fracturing and lattice defects are the main causes for magnetic domain size reduction and generate an increase in coercivity and the suppression of magnetic transitions (e.g. 34 K transition in pyrrhotite, Verwey transition in magnetite).Especially for an adequate investigation of shock-induced modifications in ferromagnetic minerals, a combination of microstructural and magnetic measurements is therefore essential.This project focusses on two significant aspects of extreme conditions - the consequence of shock waves on natural material on Earth and on the magnetic mineralogy of exotic magnetic minerals in iron meteorites. In order to obtain general correlations between deformation structures and magnetic properties, the specific magnetic properties and carriers as well as microstructures of samples from two impact structures in marine targets (Lockne and Chesapeake Bay) will be compared with shocked magnetite ore and magnetite-bearing target lithologies from outside the crater (Lockne) as well as from undeformed megablocks within the crater (Chesapeake Bay). We will test the hypothesis if shock-related microstructures and associated magnetic properties can significantly be overprinted by postshock hydrothermal alteration. We especially want to focus on the Verwey transition (TV) as lower TVs are described for shocked impact lithologies. Hence, the main focus of this study lies on magneto-mineralogical investigations which combine low- and high-temperature magnetic susceptibility and saturation isothermal remanent magnetization with mineralogical and microstructural investigations. The same methods will then be used for the investigation of iron meteorites, whose magnetic properties are often controled by exotic magnetic minerals like cohenite, schreibersite and daubreelite in addition to the metal phases. Magnetic transition temperatures of those phases are poorly documented in relation to their chemical composition as well as to their crystallographic and microstructural configuration. For a general understanding of shock-related magnetization processes in extraterrestrial and terrestrial material, however, it is crucial to obtain a general correlation between the initial 'unshocked' state and the subsequent shock- and alteration-related overprints.

Organic matter composition in the subsoil: Contribution of root litter and microbial-derived compounds

The aim of P2 within the Research Unit 'The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM)' is to contribute to the understanding of the different sources and stabilization processes of subsoil organic matter. This will be achieved by the analysis of the soil organic matter composition in topsoil versus subsoil by 13C NMR spectroscopy in bulk soils as well as organo-mineral associations. This will be done on a number of soil profiles differing in parent material and mineralogy and therefore also in the relevance of organo-mineral associations for subsoil C stabilization. In addition, a specific sampling approach will allow to differentiate three zones associated with the dominating effect of (1) leaching of DOC (the 'bulk soil' between trees), (2) root litter decomposition (the 'root-affected zone'), and (3) direct rhizodeposition of root exudates (the 'rhizosphere' sensu strictu). The contribution of above-ground versus below-ground litter is differentiated by the analysis of cutin and suberin biomarkers. Organic matter derived from microbial sources will be identified by the microbial signature of polysaccharides in the subsoil through the analysis of neutral sugars and amino sugars. Organo-mineral associations will be further characterized by N2-BET analyses to delineate the coverage of the mineral phase with organic matter. With these analyses and our specific analytical expertise at the submicron scale (nanoSIMS) we will participate in selected joint experiments of the research unit.

Forschergruppe (FOR) 1806: The Forgotten Part of Carbon Cycling: Organic Matter Storage and Turnover in Subsoils (SUBSOM)

We are currently facing the urgent need to improve our understanding of carbon cycling in subsoils, because the organic carbon pool below 30 cm depth is considerably larger than that in the topsoil and a substantial part of the subsoil C pool appears to be much less recalcitrant than expected over the last decades. Therefore, small changes in environmental conditions could change not only carbon cycling in topsoils, but also in subsoils. While organic matter stabilization mechanisms and factors controlling its turnover are well understood in topsoils, the underlying mechanisms are not valid in subsoils due to depth dependent differences regarding (1) amounts and composition of C-pools and C-inputs, (2) aeration, moisture and temperature regimes, (3) relevance of specific soil organic carbon (SOC) stabilisation mechanisms and (4) spatial heterogeneity of physico-chemical and biological parameters. Due to very low C concentrations and high spatio-temporal variability of properties and processes, the investigation of subsoil phenomena and processes poses major methodological, instrumental and analytical challenges. This project will face these challenges with a transdisciplinary team of soil scientists applying innovative approaches and considering the magnitude, chemical and isotopic composition and 14C-content of all relevant C-flux components and C-fractions. Taking also the spatial and temporal variability into account, will allow us to understand the four-dimensional changes of C-cycling in this environment. The nine closely interlinked subprojects coordinated by the central project will combine field C-flux measurements with detailed analyses of subsoil properties and in-situ experiments at a central field site on a sandy soil near Hannover. The field measurements are supplemented by laboratory studies for the determination of factors controlling C stabilization and C turnover. Ultimately, the results generated by the subprojects and the data synthesized in the coordinating project will greatly enhance our knowledge and conceptual understanding of the processes and controlling factors of subsoil carbon turnover as a prerequisite for numerical modelling of C-dynamics in subsoils.

Natural variation of flowering time due to cis-regulatory evolution of FLOWERING LOCUS T and its orthologs and paralogs in Brassica napus

In many plant species, FLOWERING LOCUS T and related proteins are the mobile signal that communicates information on photoperiod from the leaves to the shoots, where the transition to flowering is realized. FT expression is tightly controlled at the transcriptional level so that it is restricted to leaves, occurs only in appropriate photoperiods, and integrates ambient temperature and developmental cues, as well as information on biotic and abiotic stress. We previously established that FT transcription in the model plant Arabidopsis thaliana requires proximal promoter cis-elements and a distal enhancer, both evolutionary conserved among Brassicacea species. In addition, FT transcription is blocked prior vernalization in biannual accessions and vernalization-dependency of FT is controlled through a CArG-box located in the first intron that binds the transcriptional repressor FLOWERING LOCUS C (FLC). Chromatin-mediated repression by the Polycomb Group (PcG) pathway is required for photoperiod-dependent FT regulation and participates in FT expression level modulation in response to other cues.In this project, I propose to explore the available sequence data from the 1001 genome project in Arabidopsis to evaluate how often changes in regulatory cis-elements at FT have occurred and how these translate into an adaptive value. Allele-specific FT expression pattern will be measured in F1 hybrids of different accessions in response to varying environmental conditions. FT alleles that show cis-regulatory variation will be further analyzed to pinpoint the causal regulatory changes and study their effect in more detail. The allotetrapolyploid species Brassica napus is a hybrid of two Brassiceae species belonging to the A- and C-type genome, which are in turn mesopolyploid due to a genome triplication that occurred ca. 10x106 years ago. We will determine allele-specific expression of FT paralogs from both genomes of a collection of B. napus accessions. The plants will be grown in the field in changing environmental conditions to maximize the chance to detect expression variation of the paralogs. We will compare the contribution of the founder genomes to the regulation of flowering time and asses variation in this contribution. A particular focus will be to study the impact of chromatin-mediated repression on allele selection in B. napus.

3R-Studie - Reduce, Reuse, Recycle für die G8-Staaten

bifa hat ein Vorhaben für die G8- Staaten bearbeitet, in dem die Entwicklungen in Deutschland innerhalb der neun Handlungsfelder ( Actions ) des Kobe 3R Action Plan dargestellt werden. Mit der 3R-Initiative beabsichtigen die G8-Staaten seit 2004 eine bessere Verankerung der Nachhaltigkeit im Umgang mit Rohstoffen durch die stärkere Förderung der drei Prinzipien Reduce, Reuse, Recycle , abgekürzt 3R , in den nationalen Abfallwirtschaftspolitiken. Im Rahmen der Beauftragung untersuchte bifa, welche Punkte aus dem Kobe 3R Action Plan bereits hinreichend durch bestehende Entwicklungen bzw. ergriffene Maßnahmen abgedeckt sind, bei welchen Aktionen noch Lücken bestehen und wie diese Lücken gefüllt werden können. Legt man die drei Zielsetzungen des Kobe 3R Action Plan und die ihnen zugeordneten Handlungsfelder als Prüfraster über die deutsche Abfallwirtschaftspolitik, lässt sich ein sehr hoher Erfüllungsgrad feststellen. Ein erheblicher Teil der vorgeschlagenen Handlungsoptionen war in Deutschland bereits vor 2008 durch konkrete Maßnahmen umgesetzt worden. Für einen anderen Teil wiederum lässt sich der Ursprung, z. B. in Form eines ersten Gesetzentwurfs, auf die Zeit vor 2008 zurückdatieren, die Umsetzung durch die Veröffentlichung im Bundesgesetzblatt aber fand 2008-2011 statt. Einige Regelungen setzen Richtlinien oder Verordnungen der EU, die ihrerseits zum Teil auf Bestrebungen Deutschlands hin zustande kamen, in nationales Recht um. Mit dem in einer fortgeschrittenen Version vorliegenden Entwurf eines novellierten Kreislaufwirtschaftsgesetzes vollzieht Deutschland einen weiteren wichtigen Schritt hin zu einer Abfallwirtschaft, deren Markenzeichen insbesondere eine hohe Ressourceneffizienz ist. Dennoch verbleiben Optimierungspotenziale, zu deren Ausschöpfung bifa Vorschläge für das Bundesumweltministerium erarbeitet hat. Im Zuge des Projekts analysierte bifa u. a. die Importe und Exporte notifizierungspflichtiger Abfälle. Der Saldo hat sich den bifa-Analysen zufolge seit 1998 umgekehrt: Wurden 1998 noch etwa doppelt so viel notifizierungspflichtige Abfälle exportiert wie importiert, hat sich der Import seitdem vervierfacht und die Exporte sind sogar leicht gesunken. Ein wichtiger Grund ist die Verfügbarkeit von Behandlungs- und Verwertungskapazitäten von hoher Leistungsfähigkeit in Deutschland. Die Schadstoffentfrachtung von Abfällen aus Ländern mit einer wenig entwickelten Entsorgungsinfrastruktur führt jedoch innerhalb der deutschen Öffentlichkeit immer wieder zu Kontroversen. Methoden: Analyse und Moderation sozialer Prozesse.

Effect of diffusive/dispersive processes on stable isotope ratios of organic contaminants in aquifer systems

Groundwater contamination by organic compounds represents a widespread environmental problem. The heterogeneity of geological formations and the complexity of physical and biogeochemical subsurface processes, often hamper a quantitative characterization of contaminated aquifers. Compound specific stable isotope analysis (CSIA) has emerged as a novel approach to investigate contaminant transformation and to relate contaminant sources to downgradient contamination. This method generally assumes that only (bio)chemical transformations are associated with isotope effects. However, recent studies have revealed isotope fractionation of organic contaminants by physical processes, therefore pointing to the need of further research to determine the influence of both transport and reactive processes on the observed overall isotope fractionation. While the effect of gasphase diffusion on isotope ratios has been studied in detail, possible effects of aqueous phase diffusion and dispersion have received little attention so far.The goals of this study are to quantify carbon (13C/12C) and, for chlorinated compounds, chlorine (37Cl/35Cl) isotope fractionation during diffusive/dispersive transport of organic contaminants in groundwater and to determine its consequences for source allocation and assessment of reactive processes using isotopes. The proposed research is based on the combination of high-resolution experimental studies, both at the laboratory (i.e. zero-, one- and two-dimensional systems) and at the field scales, and solute transport modeling. The project combines the expertise in the field of contaminant transport with the expertise on isotope methods in contaminant hydrogeology.

Effect of agricultural intensification on cereal aphid-primary parasitoid-hyperparasitoid food web structures and interactions

Changes in agroecosystem management (e.g. landscape diversity, management intensity) affect the natural control of pests. The effects of agricultural change on this ecosystem service, however, are not universal and the mechanisms affecting it remain to be understood. As biological control is effectively the product of networks of interactions between pests and their natural enemies, food web analysis provides a versatile tool to address this gap of knowledge. The proposed project will utilize a molecular food web approach and examine, for the first time, how changes in plant fertilisation and landscape complexity affect quantitative aphid-parasitoid-hyperparasitoid food webs on a species-specific level to unravel how changes in food web interactions affect parasitoid aphid control. Based on the fieldderived data, cage experiments will be conducted to assess how parasitoid diversity and identity affect parasitoid interactions and pest control, complementing the field results. The work proposed here will take research on parasitoid aphid control one step further, as it will provide a clearer understanding of how plant fertilization affects whole aphid-parasitoid food webs in both simple and complex landscapes, allowing for further improvements in natural pest control.

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